390 results match your criteria: "Institute for Frontier Science Initiative[Affiliation]"

Phototriggered Generation of Ynol Ethers and Their Rearrangement to Ketenes.

J Org Chem

August 2024

Faculty of Pharmaceutical Sciences, Institute of Medical, Pharmaceutical, and Health Sciences, Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan.

This study developed reactions for the phototriggered generation of reactive ynol ethers using alkoxycyclopropenones. The resulting ynol ethers underwent rearrangement to ketenes, which subsequently participated in cycloaddition with alkynes and the acylation of amines. The alkoxy groups in the ynol ethers significantly influenced on the reactivity toward their rearrangement to ketenes.

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Unlocking the Gateway: The Spatio-Temporal Dynamics of the p53 Family Driven by the Nuclear Pores and Its Implication for the Therapeutic Approach in Cancer.

Int J Mol Sci

July 2024

Cell-Bionomics Research Unit, Innovative Integrated Bio-Research Core, Institute for Frontier Science Initiative, Kanazawa University, Kakuma-machi, Kanazawa 9201192, Japan.

The p53 family remains a captivating focus of an extensive number of current studies. Accumulating evidence indicates that p53 abnormalities rank among the most prevalent in cancer. Given the numerous existing studies, which mostly focus on the mutations, expression profiles, and functional perturbations exhibited by members of the p53 family across diverse malignancies, this review will concentrate more on less explored facets regarding p53 activation and stabilization by the nuclear pore complex (NPC) in cancer, drawing on several studies.

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Androgen-responsive FOXP4 is a target for endometrial carcinoma.

Commun Biol

June 2024

Division of Animal Disease Model, Research Center for Experimental Modeling of Human Disease, Kanazawa University, Kanazawa, Japan.

Article Synopsis
  • Low estrogen levels are thought to suppress uterine endometrial carcinoma, yet most cases arise after menopause, prompting a focus on declining androgen levels as a potential factor in its progression.
  • The study examines the role of androgen and its receptor (AR) by analyzing clinical data, culturing cancer cell lines, and using murine models, showing that higher androgen receptor expression and dihydrotestosterone (DHT) levels correlate with lower disease-free survival.
  • DHT reduces cancer cell proliferation and suppresses FOXP4 expression, suggesting that the androgen/AR system can inhibit malignant behavior in endometrial carcinoma, pointing to FOXP4 as a key target for future clinical strategies.
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Phase-separated super-enhancers confer an innate radioresistance on genomic DNA.

J Radiat Res

July 2024

Division of Transdisciplinary Sciences, Graduate School of Frontier Science Initiative, Kanazawa University, Kakuma-machi, Kanazawa, Ishikawa 920-1192, Japan.

Recently, biomolecular condensates formed through liquid-liquid phase separation have been widely reported to regulate key intracellular processes involved in cell biology and pathogenesis. BRD4 is a nuclear protein instrumental to the establishment of phase-separated super-enhancers (SEs) to direct the transcription of important genes. We previously observed that protein droplets of BRD4 became hydrophobic as their size increase, implying an ability of SEs to limit the ionization of water molecules by irradiation.

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Prediction and causal inference of hyperuricemia using gut microbiota.

Sci Rep

April 2024

Laboratory of Medical Microbiology and Microbiome, Department of Clinical Laboratory and Biomedical Sciences, Division of Health Sciences, Osaka University Graduate School of Medicine, 1-7 Yamadaoka, Suita, Osaka, 565-0871, Japan.

Article Synopsis
  • - Hyperuricemia (HUA), characterized by high uric acid levels, is linked to conditions like gout, hypertension, and chronic kidney disease, and is influenced by gut microbiota (GM).
  • - A study involving 478 participants used advanced sequencing and machine learning to analyze gut microbiomes, revealing that those with HUA had lower microbial diversity, especially notable in the genera Collinsella and Faecalibacterium.
  • - The findings suggest that a higher abundance of the gut bacteria Collinsella correlates with increased blood uric acid levels, indicating a potential predictive relationship between specific gut microbes and HUA.
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M2 macrophage-derived TGF-β induces age-associated loss of adipogenesis through progenitor cell senescence.

Mol Metab

June 2024

Division of Cancer Cell Biology, The Institute of Medical Science, The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan. Electronic address:

Objectives: Adipose tissue is an endocrine and energy storage organ composed of several different cell types, including mature adipocytes, stromal cells, endothelial cells, and a variety of immune cells. Adipose tissue aging contributes to the pathogenesis of metabolic dysfunction and is likely induced by crosstalk between adipose progenitor cells (APCs) and immune cells, but the underlying molecular mechanisms remain largely unknown. In this study, we revealed the biological role of p16 senescent APCs, and investigated the crosstalk between each cell type in the aged white adipose tissue.

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CO-induced gate-opening structural transition process of a porous coordination polymer revealed by solid-state C NMR.

Chem Commun (Camb)

May 2024

Division of Material Chemistry, Graduate School of Natural Science and Technology, Kanazawa University, Kakuma-machi, Kanazawa, Ishikawa 920-1192, Japan.

This study investigates the gate-opening closed-to-open-pore structural transition of a porous coordination polymer induced by CO adsorption. Solid-state C NMR examination of adsorbed CO and framework dynamics reveals the surface adsorption state of the closed structure below the transition pressure and an intermediate structure during the transition process.

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Development of a high throughput system to screen compounds that revert the activated hepatic stellate cells to a quiescent-like state.

Sci Rep

April 2024

Laboratory of Cell Growth and Differentiation, Institute for Quantitative Biosciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-Ku, Tokyo, 113-0032, Japan.

Article Synopsis
  • Chronic liver injury can lead to fibrosis, cirrhosis, and cancer, making it essential to find ways to prevent or reverse fibrosis.
  • Hepatic stellate cells (HSCs) play a key role in fibrosis; they transform from a resting state to active myofibroblasts when the liver is injured, which increases the production of extracellular matrices.
  • Researchers showed that activated HSCs could revert to a "quiescent-like" state when liver injuries are minimized and identified specific chemical compounds that can trigger this deactivation process, leading to potential new treatments for advanced liver fibrosis.
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Crafty mimicry grants nuclear pore entry to HIV.

Cell Host Microbe

April 2024

WPI Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kanazawa 920-1192, Japan; Cell-Bionomics Research Unit, Innovative Integrated Bio-Research Core, Institute for Frontier Science Initiative, Kanazawa University, Kanazawa 920-1192, Japan. Electronic address:

The size of the nuclear pore should, in principle, prevent HIV-1 entry. However, HIV-1 capsid is able to gain nuclear pore entry. In a recent issue of Nature, Fu et al.

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Article Synopsis
  • - Each nucleosome is made up of four types of histone proteins, and their tails are vital for regulating gene expression through modifications after protein synthesis (PTMs).
  • - Using high-speed atomic force microscopy, researchers studied nucleosome dynamics when histone tails were removed, finding that the absence of all tails caused significant structural changes and increased flexibility in nucleosome behavior.
  • - The study revealed that histone tails, especially from H2B and H3, stabilize nucleosomes and their post-translational modifications play a key role in how nucleosomes interact with DNA.
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Synthesis and Evaluation of Radiogallium Labeled Bone-Imaging Probes Using Oligo-γ-Carboxy Glutamic Acid Peptides as Carriers to Bone.

Mol Pharm

May 2024

Department of Nuclear Medicine, Institute of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Takara-machi 13-1, Kanazawa, Ishikawa 920-8641, Japan.

Article Synopsis
  • The study focused on the role of carboxy group density in the effectiveness of peptide-based radiopharmaceuticals for targeting bones.
  • Higher carboxy group densities were identified in oligo-γ-carboxy glutamic acid peptides (Gla), which were compared to other peptides like oligo-glutamic acid (Glu) and oligo-aspartic acid (Asp).
  • Results demonstrated that the Gla-based radiopharmaceutical showed enhanced bone affinity, accumulation, and better imaging capabilities, indicating their potential as superior agents for bone imaging.
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Purpose: A probe for targeted alpha therapy (TAT) using the RGD peptide (Ga-DOTA-K([At]APBA)-c(RGDfK) ([At]1)) with albumin-binding moiety (ABM) was recently developed. [At]1 highly accumulated in tumors and significantly inhibited tumor growth in U-87 MG tumor-bearing mice. However, high [At]1 retention in blood may cause critical adverse events, such as hematotoxicity.

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Recent advances in the development of Ac- and At-labeled radioligands for radiotheranostics.

Anal Sci

May 2024

Graduate School of Medical Sciences, Kanazawa University, Kakuma-Machi, Kanazawa, Ishikawa, 920-1192, Japan.

Radiotheranostics utilizes a set of radioligands incorporating diagnostic or therapeutic radionuclides to achieve both diagnosis and therapy. Imaging probes using diagnostic radionuclides have been used for systemic cancer imaging. Integration of therapeutic radionuclides into the imaging probes serves as potent agents for radionuclide therapy.

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Trans-omic analysis reveals opposite metabolic dysregulation between feeding and fasting in liver associated with obesity.

iScience

March 2024

Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8562, Japan.

Article Synopsis
  • Obesity disrupts liver metabolism during both feeding and fasting, leading to a loss of metabolic balance, though the exact mechanisms are still unclear.
  • A study gathered multi-omics data from both normal mice and leptin-deficient obese mice to analyze the differences in metabolic reactions during feeding and after 16 hours of fasting.
  • The research found that metabolic intermediates fluctuate between feeding and fasting, with certain regulations reversing their effects, indicating a complex dysregulation of metabolism associated with obesity.
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Squamous cell carcinomas (SCCs) are common and aggressive malignancies. Immune check point blockade (ICB) therapy using PD-1/PD-L1 antibodies has been approved in several types of advanced SCCs. However, low response rate and treatment resistance are common.

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While loss of function (LOF) of retinoblastoma 1 (RB1) tumor suppressor is known to drive initiation of small-cell lung cancer and retinoblastoma, RB1 mutation is rarely observed in breast cancers at their initiation. In this study, we investigated the impact on untransformed mammary epithelial cells given by RB1 LOF. Depletion of RB1 in anon-tumorigenic MCF10A cells induced reversible growth arrest (quiescence) featured by downregulation of multiple cyclins and MYC, upregulation of p27, and lack of expression of markers which indicate cellular senescence or epithelial-mesenchymal transition (EMT).

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Nuclear pore complexes (NPCs) on the nuclear membrane surface have a crucial function in controlling the movement of small molecules and macromolecules between the cell nucleus and cytoplasm through their intricate core channel resembling a spiderweb with several layers. Currently, there are few methods available to accurately measure the dynamics of nuclear pores on the nuclear membranes at the nanoscale. The limitation of traditional optical imaging is due to diffraction, which prevents achieving the required resolution for observing a diverse array of organelles and proteins within cells.

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Optimization of Zwitterionic Polymers for Cell Cryopreservation.

Macromol Biosci

July 2024

Faculty of Biological Science and Technology, Institute of Science and Engineering, Kanazawa University, Kakuma-machi, Kanazawa, 920-1192, Japan.

Cryopreservation techniques are valuable for the preservation of genetic properties in cells, and the development of this technology contributes to various fields. In a previous study, an isotonic freezing medium composed of poly(zwitterion) (polyZI) has been reported, which alleviates osmotic shock, unlike typical hypertonic freezing media. In this study, the primitive freezing medium composed of emerging polyZI is optimized.

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Introduction: Imaging a non-small cell lung cancer (NSCLC) using radiolabeled tyrosine kinase inhibitors (TKIs) has attracted attention due to their unique interaction with the target epidermal growth factor receptor (EGFR). Olmutinib (OTB) is one of the third-generation EGFR TKIs, which selectively inhibit EGFR L858R/T790M mutation. In this study, we aim to estimate the interaction of the iodinated OTB (I-OTB)-receptor complex by molecular docking.

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Article Synopsis
  • Gastric cancer metastasis is a leading cause of death globally, and research indicates that inhibiting the RUNX3 gene in cancer cells reduces their ability to migrate, invade, and grow independently.* -
  • Studies using CRISPR to knock out RUNX3 in gastric cancer cells showed decreased tumor growth and liver metastasis, highlighting RUNX3 as a potential driver of cancer spread.* -
  • Further investigations revealed that RUNX3 regulates crucial developmental pathways and directly influences pro-metastatic genes, particularly WNT5A, suggesting that targeting the RUNX3-WNT5A signaling could be a promising approach for treating gastric cancer metastasis.*
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Article Synopsis
  • - Chronic metabolic stress can increase traits associated with cancer stem cells (CSCs) and contribute to chemoresistance, mainly due to issues in sugar metabolism and protein modification processes.
  • - Research indicates that production of a substance called hyaluronan under chronic stress conditions exacerbates these CSC-like traits, while low doses of specific compounds can mimic this effect by disrupting sugar metabolism.
  • - Enhancing sugar assembly and blocking Notch signaling can reduce CSC characteristics and improve the effectiveness of chemotherapy drugs like cisplatin, revealing a new way that metabolic stress helps cancer cells survive.
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Recent development of probes for radiotheranostics.

Anal Sci

January 2024

Graduate School of Medical Sciences, Kanazawa University, Kakuma-machi, Kanazawa, Ishikawa, 920-1192, Japan.

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A phototriggered conjugation reaction of an aminocyclobutenedione and an acidic nucleophile was discovered. Upon blue light irradiation of the materials, a butenolide derivative with substituents derived from the aminocyclobutenedione and the nucleophile was produced. The reaction proceeded efficiently under organic solvent or organic solvent/aqueous buffer (1/1) conditions.

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Understanding voltage-gated sodium (Na) channels is significant since they generate action potential. Na channels consist of a pore domain (PD) and a voltage sensor domain (VSD). All resolved Na structures in different gating states have VSDs that tightly interact with PDs; however, it is unclear whether VSDs attach to PDs during gating under physiological conditions.

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Cell-compatible isotonic freezing media enabled by thermo-responsive osmolyte-adsorption/exclusion polymer matrices.

Commun Chem

November 2023

Faculty of Biological Science and Technology, Institute of Science and Engineering, Kanazawa University, Kakuma-machi, Kanazawa, 920-1192, Japan.

During the long-term storage of cells, it is necessary to inhibit ice crystal formation by adding cryoprotectants. Non-cell-permeable cryoprotectants have high osmotic pressure which dehydrates cells, indirectly suppressing intracellular ice crystal formation. However, the high osmotic pressure and dehydration often damage cells.

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