323 results match your criteria: "Institute for Biological and Medical Engineering[Affiliation]"

Increased BMI is associated with an altered decision-making process during healthy food choices in males and females.

Appetite

January 2025

Faculty of Biological Sciences, Pontificia Universidad Católica de Chile. Electronic address:

Unhealthy diets (rich in calories, sugar, fat, and sodium) are a major cause of obesity. Why individuals struggle to make healthy food choices remains unclear. This study examined how body mass index, biological sex, and eating context influence food attribute perception, the food choice process, and the percentage of healthy food choices.

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Plasmids play a vital role in synthetic biology by enabling the introduction and expression of foreign genes in various organisms, thereby facilitating the construction of biological circuits and pathways within and between cell populations. For many applications, maintaining functional plasmids without antibiotic selection is critical. This study introduces an open-hardware-based microfluidic workflow for analyzing plasmid retention by culturing single cells in gel microdroplets and quantifying microcolonies using fluorescence microscopy.

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Unsupervised reconstruction of accelerated cardiac cine MRI using neural fields.

Comput Biol Med

December 2024

Millennium Nucleus for Applied Control and Inverse Problems, Santiago, Chile; Millennium Institute for Intelligent Healthcare Engineering, Santiago, Chile; Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom; School of Engineering, Pontificia Universidad Católica de Chile, Santiago, Chile.

Background: Cardiac cine MRI is the gold standard for cardiac functional assessment, but the inherently slow acquisition process creates the necessity of reconstruction approaches for accelerated undersampled acquisitions. Several regularization approaches that exploit spatial-temporal redundancy have been proposed to reconstruct undersampled cardiac cine MRI. More recently, methods based on supervised deep learning have been also proposed to further accelerate acquisition and reconstruction.

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OPA1 and disease-causing mutants perturb mitochondrial nucleoid distribution.

Cell Death Dis

November 2024

Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile.

Optic atrophy protein 1 (OPA1) mediates inner mitochondrial membrane (IMM) fusion and cristae organization. Mutations in OPA1 cause autosomal dominant optic atrophy (ADOA), a leading cause of blindness. Cells from ADOA patients show impaired mitochondrial fusion, cristae structure, bioenergetic function, and mitochondrial DNA (mtDNA) integrity.

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Effect of chronic exogenous oxytocin administration on exercise performance and cardiovagal control in hypobaric hypoxia in rats.

Biol Res

November 2024

Exercise Applied Physiology Laboratory, Centro de Investigación en Fisiología y Medicina de Altura (FIMEDALT), Departamento Biomedico, Facultad de Ciencias de la Salud, Universidad de Antofagasta, Antofagasta, Chile.

Background: Outstanding exercise performance has been associated with an exacerbated vagal outflow. Nevertheless, during high-altitude hypobaric-hypoxia (HH), there is a baroreflex-dependent parasympathetic withdrawal and exercise performance deterioration. Notably, vagal control is pivotal in exercise performance, and exogenous oxytocin (OXY) administration has been shown to enhance parasympathetic drive; however, no evidence shows their role in exercise performance during HH.

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Extracellular vesicle production by oral bacteria related to dental caries and periodontal disease: role in microbe-host and interspecies interactions.

Crit Rev Microbiol

November 2024

Institute for Biological and Medical Engineering, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile.

Extracellular vesicles (EVs) are cell membrane-derived structures between 20-400 nm in size. In bacteria, EVs play a crucial role in molecule secretion, cell wall biogenesis, cell-cell communication, biofilm development, and host-pathogen interactions. Despite these increasing reports of bacterial-derived vesicles, there remains a limited number of studies that summarize oral bacterial EVs, their cargo, and their main biological functions.

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Oxygenation by Intravascular Photosynthesis Reduces Kidney Damage During ex Vivo Preservation.

ACS Appl Bio Mater

December 2024

Institute for Biological and Medical Engineering, Faculties of Engineering, Medicine and Biological Sciences, Pontificia Universidad Católica de Chile, Av. Vicuña Mackenna 4860, Santiago 7820436, Chile.

Several clinical issues are associated with reduced oxygen delivery to tissues due to impaired vascular perfusion; moreover, organs procured for transplantation are subjected to severe hypoxia during preservation. Consequently, alternative tissue oxygenation is an active field in biomedical research where several innovative approaches have been recently proposed. Among these, intravascular photosynthesis represents a promising approach as it relies on the intrinsic capacity of certain microorganisms to produce oxygen upon illumination.

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Simulation-free prediction of atrial fibrillation inducibility with the fibrotic kernel signature.

Med Image Anal

January 2025

Department of Mechanical and Metallurgical Engineering and Institute for Biological and Medical Engineering, Pontificia Universidad Católica de Chile, Santiago, Chile; Millennium Institute for Intelligent Healthcare Engineering, iHEALTH, Chile. Electronic address:

Computational models of atrial fibrillation (AF) can help improve success rates of interventions, such as ablation. However, evaluating the efficacy of different treatments requires performing multiple costly simulations by pacing at different points and checking whether AF has been induced or not, hindering the clinical application of these models. In this work, we propose a classification method that can predict AF inducibility in patient-specific cardiac models without running additional simulations.

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Article Synopsis
  • Functional MRI (fMRI) is often used to assess language function but can be inaccurate in patients with brain tumors due to cognitive issues and movement artifacts; gray matter volume (GMV) analysis offers a more stable alternative.
  • This study analyzed MRI data from 22 healthy subjects and 28 patients with left-hemisphere tumors, exploring the link between GMV in language-specific brain regions and results from fMRI language lateralization tasks.
  • Findings indicate that GMV in relevant brain areas is a strong predictor of language lateralization, with predictions achieving accuracy rates from 78% to 94%, suggesting that GMV analysis can enhance preoperative assessments for language function in complex cases.
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Identification of perceived sentences using deep neural networks in EEG.

J Neural Eng

October 2024

Institute for Biological and Medical Engineering, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Catolica de Chile, Santiago 8970117, Chile.

Article Synopsis
  • The study explores how deep neural networks (DNNs) can decode speech from brain activity, which could help individuals with speech disorders communicate.
  • Researchers collected a large dataset of EEG recordings from 56 healthy participants to train multiple neural networks on identifying spoken sentences in Spanish.
  • Results indicate that DNNs can accurately distinguish sentence identity and adapt to individual characteristics, proving effective across various approaches, with insights into neural processes contributing to language understanding.
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Towards chlorocytes for therapeutic intravascular photosynthesis.

Appl Microbiol Biotechnol

October 2024

Institute for Biological and Medical Engineering, Faculties of Engineering, Medicine and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile.

Aerobic metabolism relies on external oxygen production through photosynthesis and its subsequent transport into each cell of the body via the cardiorespiratory system. This mechanism has successfully evolved over millions of years, enabling animals to inhabit most environments on Earth. However, the insufficient oxygen supply leads to several clinical problems, ranging from non-healing wounds to tumor resistance to therapy.

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Article Synopsis
  • The study aimed to create and assess a new method for conducting free-breathing 3D whole-heart Cardiac Magnetic Resonance Angiography (CMRA) without contrast agents at a lower magnetic field strength of 0.55T.
  • To achieve this, researchers optimized pulse sequences and imaging techniques, incorporating advanced methods like low-rank denoising and respiratory motion correction, and tested their approach on 11 healthy volunteers.
  • Results showed that the new method produced high-quality images with minimal artifacts in just 6 minutes, matching the performance of higher field strength systems, paving the way for future testing in patients with heart conditions.
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Introduction: Alzheimer's disease (AD) stands as significant challenge in realm of neurodegenerative disorder. It is characterized by gradual decline in cognitive function and memory loss. It has already expanded its prevalence to 55 million people worldwide and is expected to rise significantly.

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Unraveling autonomic cardiovascular control complexity during orthostatic stress: Insights from a mathematical model.

Math Biosci

November 2024

Institute for Biological and Medical Engineering, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Catolica de Chile, Avda.Vicuña Mackenna 4860, Macul, Santiago, 8970117, Chile; Millenium Institute for Intelligent Healthcare Engineering iHEALTH, Avda.Vicuña Mackenna 4860, Macul, Santiago, 8970117, Chile. Electronic address:

Article Synopsis
  • Understanding the complexities of cardiovascular control through the autonomic system is challenging, as shown by the ongoing debates around conditions like orthostatic intolerance.
  • This study created a mathematical model to simulate the sympathetic control of the cardiovascular system, testing young women with varying responses to a head-up-tilt test and measuring their heart rate and blood pressure.
  • The model successfully predicted blood pressure and flow dynamics, identifying seven key parameters that could serve as biomarkers for patient classification, highlighting the potential of computational methods in studying autonomic system pathologies.
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The Inhibitory Effects of the Natural Stilbene Piceatannol on Lactate Transport In Vitro Mediated by Monocarboxylate Transporters.

Mol Nutr Food Res

October 2024

School of Biological Sciences, Pontificia Universidad Católica de Chile, Av. Libertador General Bernardo O'Higgins 340, Santiago, 8331150, Chile.

Scope: Lactate, a signaling molecule and energy source, crosses membranes through monocarboxylate transporters (MCTs). MCT1 and MCT4 are potential cancer drug targets due to their role in metabolic reprogramming of cancer cells. Stilbenes, plant secondary metabolites found in several food sources, have anticancer effects, though their mechanisms of action are not well understood.

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A novel viral RNA detection method based on the combined use of trans-acting ribozymes and HCR-FRET analyses.

PLoS One

September 2024

Laboratory of Synthetic Biology, Department of Genetics and Morphology, Institute of Biological Science, University of Brasília (UnB), Brasília, Federal District, Brazil.

Article Synopsis
  • The diagnosis of retroviruses is crucial for controlling pandemics, but current methods like RT-qPCR are costly and logistically challenging.
  • A novel detection method for SARS-CoV-2 viral RNA was developed, combining ribozymes and FRET-based DNA hairpins for enhanced sensitivity.
  • The results showed that this new approach cleaved viral RNA quickly and effectively, allowing for specific detection and the potential for adaptation to other viruses while also exploring low-cost detection options.
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A contact-based analysis of local energetic frustration dynamics identifies key residues enabling RfaH fold-switch.

Protein Sci

October 2024

Institute for Biological and Medical Engineering, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile.

Article Synopsis
  • Fold-switching allows proteins to alternate between two very different shapes to control their functions.
  • Researchers have identified about 100 proteins that can do this, but determining which specific amino acids are crucial to this process is difficult.
  • By using simulations and analyzing energetic frustration, the study examined the fold-switching of RfaH and found 20 important amino acids whose frustration changes during this process, providing insights for studying other proteins with similar behavior.
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Evaluation of myocarditis with a free-breathing three-dimensional isotropic whole-heart joint T1 and T2 mapping sequence.

J Cardiovasc Magn Reson

December 2024

School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom; Cardiology Department, Guy's & St Thomas' NHS Foundation Trust, London, United Kingdom. Electronic address:

Background: The diagnosis of myocarditis by cardiovascular magnetic resonance (CMR) requires the use of T2 and T1 weighted imaging, ideally incorporating parametric mapping. Current two-dimensional (2D) mapping sequences are acquired sequentially and involve multiple breath-holds resulting in prolonged scan times and anisotropic image resolution. We developed an isotropic free-breathing three-dimensional (3D) whole-heart sequence that allows simultaneous T1 and T2 mapping and validated it in patients with suspected myocarditis.

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Differential effects of environmental exposures on clinically relevant endophenotypes between sexes.

Sci Rep

September 2024

Institute for Biomedical Informatics, Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.

Sex and gender differences play a crucial role in health and disease outcomes. This study used data from the National Health and Nutrition Examination Survey to explore how environmental exposures affect health-related traits differently in males and females. We utilized a sex-stratified phenomic environment-wide association study (PheEWAS), which allowed the identification of associations across a wide range of phenotypes and environmental exposures.

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Assessment of liver graft quality during hypothermic oxygenated perfusion: the first international validation study.

J Hepatol

September 2024

Department of Surgery and Transplantation, Swiss HPB Centre, University Hospital Zurich, Switzerland; Division of Visceral Surgery, University Digestive Health Care Centre Clarunis, University Hospital Basel, Switzerland. Electronic address:

Article Synopsis
  • Scientists are studying how to tell if a donated liver is healthy enough to use for transplant by looking at special markers during a process called HOPE.
  • They collected samples from livers in 10 different centers across 7 countries and found that the levels of a marker called FMN can help predict if the liver will work well after being transplanted.
  • The study showed that FMN is better at predicting liver problems compared to older methods, making it a promising tool for doctors to decide which livers are suitable for transplant.
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XSIM: A structural similarity index measure optimized for MRI QSM.

Magn Reson Med

January 2025

Department of Electrical Engineering, Pontificia Universidad Catolica de Chile, Santiago, Chile.

Purpose: The structural similarity index measure (SSIM) has become a popular quality metric to evaluate QSM in a way that is closer to human perception than RMS error (RMSE). However, SSIM may overpenalize errors in diamagnetic tissues and underpenalize them in paramagnetic tissues, resulting in biasing. In addition, extreme artifacts may compress the dynamic range, resulting in unrealistically high SSIM scores (hacking).

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Cardiovascular magnetic resonance reveals myocardial involvement in patients with active stage of inflammatory bowel disease.

Clin Res Cardiol

August 2024

Working Group Cardiovascular Magnetic Resonance, Experimental and Clinical Research CenterMax-Delbrück Center for Molecular MedicineDepartment of Cardiology and Nephrology, Charité Medical Faculty, HELIOS Klinikum Berlin Buch, Charité - Universitätsmedizin Berlin Lindenberger Weg 80, 13125, Berlin, Germany.

Background: Active inflammatory bowel disease (A-IBD) but not remission (R-IBD) has been associated with an increased risk of cardiovascular death and hospitalization for heart failure.

Objectives: Using cardiovascular magnetic resonance (CMR), this study aims to assess adverse myocardial remodeling in patients with IBD in correlation with disease activity.

Methods: Forty-four IBD patients without cardiovascular disease (24 female, median-age: 39.

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Purpose: To develop a framework for simultaneous three-dimensional (3D) mapping of , , and fat signal fraction in the liver at 0.55 T.

Methods: The proposed sequence acquires four interleaved 3D volumes with a two-echo Dixon readout.

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Ventilatory thresholds (VTs) are key physiological parameters used to evaluate physical performance and determine aerobic and anaerobic transitions during exercise. Current assessment of these parameters requires ergospirometry, limiting evaluation to laboratory or clinical settings. In this work, we introduce a wearable respiratory system that continuously tracks breathing during exercise and estimates VTs during ramp tests.

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Article Synopsis
  • Recent advancements like super-resolution microscopy and microfabrication are enhancing our ability to study autophagy with high precision.
  • These technologies allow for a better understanding of how autophagy works and what triggers it.
  • The addendum focuses on improving autophagy research through optical techniques, bioengineering for precise experiments, and theoretical insights on the link between cell mechanics and autophagy.
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