383 results match your criteria: "Indraprastha Institute of Information Technology[Affiliation]"
PLoS One
January 2025
Department of Electrical Engineering, Indian Institute of Technology Delhi, New Delhi, India.
Online Mental Health Communities (OMHCs), such as Reddit, have witnessed a surge in popularity as go-to platforms for seeking information and support in managing mental health needs. Platforms like Reddit offer immediate interactions with peers, granting users a vital space for seeking mental health assistance. However, the largely unregulated nature of these platforms introduces intricate challenges for both users and society at large.
View Article and Find Full Text PDFDiagnostics (Basel)
January 2025
Department of Pediatric Surgery, All India Institute of Medical Sciences, New Delhi 110029, India.
: The complex interaction between the gut and urinary microbiota underscores the importance of understanding microbial dysbiosis in pediatric urinary tract infection (UTI). However, the literature on the gut-urinary axis in pediatric UTIs is limited. This systematic review aims to summarize the current literature on the roles of gut and urinary dysbiosis in pediatric UTIs.
View Article and Find Full Text PDFFront Microbiol
December 2024
Division of Immunology and Infectious Disease Biology, INtegrative GENomics of HOst-PathogEn (INGEN-HOPE) Laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), New Delhi, India.
Introduction: The development of the human gut microbiota is shaped by factors like delivery mode, infant feeding practices, maternal diet, and environmental conditions. Diet plays a pivotal role in determining the diversity and composition of the gut microbiome, which in turn impacts immune development and overall health during this critical period. The early years, which are vital for microbial shaping, highlight a gap in understanding how the shift from milk-based diets to solid foods influences gut microbiota development in infants and young children, particularly in Yaoundé, Cameroon.
View Article and Find Full Text PDFYale J Biol Med
December 2024
Multidisciplinary Research Unit (MRU), Maulana Azad Medical College and Associated Hospitals, New Delhi, India.
Alkhumra fever is a viral disease caused by the Alkhumra hemorrhagic fever virus (AHFV). It belongs to family , genus . AHFV is primarily transmitted to humans through the bite of infected ticks, for example, .
View Article and Find Full Text PDFChemosphere
February 2025
Infosys Centre for Artificial Intelligence, Indraprastha Institute of Information Technology Delhi (IIIT-Delhi), New Delhi, 110020, India; Department of Computational Biology, Indraprastha Institute of Information Technology Delhi (IIIT-Delhi), New Delhi, 110020, India; Center of Excellence in Healthcare, Indraprastha Institute of Information Technology Delhi (IIIT-Delhi), New Delhi, 110020, India. Electronic address:
Predicting the toxicity of molecules is essential in fields like drug discovery, environmental protection, and industrial chemical management. While traditional experimental methods are time-consuming and costly, computational models offer an efficient alternative. In this study, we introduce ToxinPredictor, a machine learning-based model to predict the toxicity of small molecules using their structural properties.
View Article and Find Full Text PDFMethods Mol Biol
December 2024
Department of Computational Biology, Indraprastha Institute of Information Technology-Delhi (IIIT-Delhi), New Delhi, India.
Cavities in proteins perform diverse functions such as substrate binding, enzyme catalysis, passage for transportation of small molecules, and protein oligomerization. Often, the physical properties of these cavities are closely linked to the protein function; such as the hydrophobic lipid-binding cavities in lipid-binding proteins (LBPs) that protect lipid substrates from the larger aqueous milieu. Therefore, the characterization of protein cavities can provide valuable insights into protein structure-function relationships, hinting toward their mechanism of action while aiding in the identification of ligand binding sites that are essential for drug discovery approaches.
View Article and Find Full Text PDFNat Rev Microbiol
December 2024
APC Microbiome Ireland, University College Cork, Cork, Ireland.
J Healthc Leadersh
December 2024
AIIMS, Guwahati, India.
Digital technologies are now integral to daily life. However, their applications for the health of populations remain largely untapped. Increasing cancer incidence, and it being the leading cause of death in every country in the world, justifies the need for increasing healthcare.
View Article and Find Full Text PDFNat Aging
December 2024
Department of Computational Biology, Indraprastha Institute of Information Technology-Delhi (IIIT-Delhi), New Delhi, India.
Aging involves metabolic changes that lead to reduced cellular fitness, yet the role of many metabolites in aging is unclear. Understanding the mechanisms of known geroprotective molecules reveals insights into metabolic networks regulating aging and aids in identifying additional geroprotectors. Here we present AgeXtend, an artificial intelligence (AI)-based multimodal geroprotector prediction platform that leverages bioactivity data of known geroprotectors.
View Article and Find Full Text PDFProteomics
November 2024
Department of Computational Biology, Indraprastha Institute of Information Technology, New Delhi, India.
Plant disease resistance (PDR) proteins are critical in identifying plant pathogens. Predicting PDR protein is essential for understanding plant-pathogen interactions and developing strategies for crop protection. This study proposes a hybrid model for predicting and designing PDR proteins against plant-invading pathogens.
View Article and Find Full Text PDFMetab Brain Dis
November 2024
Biochemistry and Molecular Biology Laboratory, Department of Zoology, Faculty of Science, University of Delhi, Delhi, 110007, India.
Int J Biol Macromol
December 2024
Department of Computational Biology, Indraprastha Institute of Information Technology, New Delhi, India. Electronic address:
Annu Rev Med
November 2024
Department of Computational Biology, Indraprastha Institute of Information Technology Delhi, New Delhi, Delhi, India; email:
The human microbiome is a sensor and modulator of physiology and homeostasis. Remarkable tractability underpins the promise of therapeutic manipulation of the microbiome. However, the definition of a normal or healthy microbiome has been elusive.
View Article and Find Full Text PDFAnn Neurosci
June 2024
Ceekr Concepts Private Limited, New Delhi, India.
Background: The hypothalamus, a small yet crucial neuroanatomical structure, integrates external (e.g., environmental) and internal (e.
View Article and Find Full Text PDFGut Pathog
November 2024
Department of Gastroenterology, All India Institute of Medical Sciences, New Delhi, 110029, India.
Background/aims: Crohn's disease (CD) and intestinal tuberculosis (ITB) are gastrointestinal (GI) inflammatory disorders with overlapping clinical presentations but diverging etiologies. The study aims to decipher CD and ITB-associated gut dysbiosis signatures and identify disease-associated co-occurring modules to evaluate whether this dysbiosis signature is a disease-specific trait or is a shared feature across diseases of diverging etiologies.
Methods: Disease-associated gut microbial modules were identified using statistical machine learning and co-abundance network analysis in controls, CD and ITB patients recruited as part of this study.
Sci Rep
November 2024
Department of Computational Biology, Indraprastha Institute of Information Technology, Okhla Industrial Estate, Phase III, (Near Govind Puri Metro Station), New Delhi, 110020, India.
Interferon-gamma (IFN-γ) is a versatile pleiotropic cytokine essential for both innate and adaptive immune responses. It exhibits both pro-inflammatory and anti-inflammatory properties, making it a promising therapeutic candidate for treating various infectious diseases and cancers. We present IFNepitope2, a host-specific technique to annotate IFN-γ inducing peptides, it is an updated version of IFNepitope introduced by Dhanda et al.
View Article and Find Full Text PDFSci Rep
November 2024
Department of Economics, and Center for Agricultural and Rural Development, Iowa State University, Ames, Iowa, USA.
Scientific data concerning climate change are critical for designing mitigation and adaptation strategies. Equally important is how stakeholders perceive climate change because perceptions influence decision-making. In this paper, we employ spatially-delineated primary surveys to evaluate weather perception biases among corn and soybean farmers located on western frontier of the U.
View Article and Find Full Text PDFInt J Biol Macromol
December 2024
Molecular Biophysics Lab, School of Chemical and Biotechnology, SASTRA Deemed To Be University, Thanjavur 613401, TamilNadu, India. Electronic address:
Glycation is the non-enzymatic reaction of glucose or its metabolites to proteins, causing irreversible changes. Methylglyoxal, a dicarbonyl, affects the structure and function of physiologically important proteins. Being a major circulatory protein, hemoglobin is highly prone to glycation.
View Article and Find Full Text PDFNat Rev Gastroenterol Hepatol
December 2024
Department of Computational Biology, Indraprastha Institute of Information Technology Delhi, Delhi, India.
Cancers (Basel)
October 2024
Department of Computational Biology, Indraprastha Institute of Information Technology (IIIT) Delhi, Okhla Industrial Estate, Phase III, New Delhi 110020, India.
Nat Rev Microbiol
October 2024
APC Microbiome Ireland, University College Cork, Cork, Ireland.
J Autism Dev Disord
October 2024
Department of Social Sciences and Humanities, Indraprastha Institute of Information Technology Delhi, New Delhi, 110020, India.
Methods
December 2024
Department of Computational Biology, Indraprastha Institute of Information Technology, Okhla Phase 3, New Delhi 110020, India. Electronic address:
HLA-DRB1*04:01 is associated with numerous diseases, including sclerosis, arthritis, diabetes, and COVID-19, emphasizing the need to scan for binders in the antigens to develop immunotherapies and vaccines. Current prediction methods are often limited by their reliance on the small datasets. This study presents HLA-DR4Pred2, developed on a large dataset containing 12,676 binders and an equal number of non-binders.
View Article and Find Full Text PDFPLoS Negl Trop Dis
October 2024
Division of Immunology and Infectious Disease Biology, INtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Delhi, India.
Background: Dengue is the most re-emergent infection, with approximately 100 million new cases reported annually, yet no effective treatment or vaccine exists. Here, we aim to define the microbial community structure and their functional profiles in the dengue positive patients with varying disease severity.
Methodology/principal Findings: Hospital admitted 112 dengue-positive patients blood samples were analyzed by dual RNA-sequencing to simultaneously identify the transcriptionally active microbes (TAMs), their expressed genes and associated pathways.
Heliyon
October 2024
Division of Immunology and Infectious Disease Biology, INtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Mall Road, Delhi-110007, India.