21,245 results match your criteria: "Indiana 46202; Roudebush Veterans Affairs Medical Center[Affiliation]"

"Lethal Mutations" a Misnomer or the Start of a Scientific Revolution?

Radiat Res

August 2024

Indiana University School of Medicine, Departments of Radiation Oncology and Medical and Molecular Genetics, Indianapolis, Indiana 46202.

The aim of this paper is to review the history surrounding the discovery of lethal mutations, later described as delayed reproductive death. Lethal mutations were suggested very early on, to be due to a generalised instability in a cell population and are considered now to be one of the first demonstrations of "radiation-induced genomic instability" which led later to the establishment of the field of "non-targeted effects." The phenomenon was first described by Seymour et al.

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Objective: Our objective is to develop and validate TrajVis, an interactive tool that assists clinicians in using artificial intelligence (AI) models to leverage patients' longitudinal electronic medical records (EMRs) for personalized precision management of chronic disease progression.

Materials And Methods: We first perform requirement analysis with clinicians and data scientists to determine the visual analytics tasks of the TrajVis system as well as its design and functionalities. A graph AI model for chronic kidney disease (CKD) trajectory inference named DisEase PrOgression Trajectory (DEPOT) is used for system development and demonstration.

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(or ) , the causative agent of Lyme disease, is a motile and invasive zoonotic pathogen, adept at navigating between its arthropod vector and mammalian host. While motility and chemotaxis are well established as essential for its enzootic cycle, the function of methyl-accepting chemotaxis proteins (MCPs) in the infectious cycle of remains unclear. In this study, we demonstrate that MCP5, one of the most abundant MCPs in , is differentially expressed in response to environmental signals as well as at different stages of the pathogen's enzootic cycle.

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Healthcare Resource Use Associated With Tumor-Induced Osteomalacia: A Literature Review.

J Clin Endocrinol Metab

December 2024

Departments of Pediatrics (Endocrinology) and Orthopaedics and Rehabilitation, Yale School of Medicine, New Haven, CT 06520-8064, USA.

Article Synopsis
  • Tumor-induced osteomalacia (TIO) is a rare syndrome caused by tumors that secrete FGF23, with initial symptoms often misdiagnosed, leading to severe patient disabilities due to delayed treatment.
  • A review encompassed 414 publications, mainly case reports, involving 621 patients, revealing an average delay of 4.6 years for diagnosis and highlighting the significant healthcare resources needed for imaging and treatment.
  • The study concluded that enhancing diagnostic processes for TIO could improve patient outcomes and decrease the overall healthcare burden associated with this condition.*
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SERCA2a overexpression improves muscle function in a canine Duchenne muscular dystrophy model.

Mol Ther Methods Clin Dev

June 2024

Department of Molecular Microbiology and Immunology, School of Medicine, The University of Missouri, Columbia, MO 65212, USA.

Excessive cytosolic calcium accumulation contributes to muscle degeneration in Duchenne muscular dystrophy (DMD). Sarco/endoplasmic reticulum calcium ATPase (SERCA) is a sarcoplasmic reticulum (SR) calcium pump that actively transports calcium from the cytosol into the SR. We previously showed that adeno-associated virus (AAV)-mediated SERCA2a therapy reduced cytosolic calcium overload and improved muscle and heart function in the murine DMD model.

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Background/aims: Alcohol-associated hepatitis (AH) mortality and risk factors have not been carefully studied in real-world settings. We examined the rate, temporal trend, and risk factors of mortality in AH.

Methods: We conducted a cohort study of individuals with AH diagnoses using medical claims data from Optum's Clinformatics® Data Mart (CDM).

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Background: Research demonstrates gaps in medications for opioid use disorder uptake (MOUDs; methadone, buprenorphine, and naltrexone) especially among adolescents. These gaps may be partly attributable to attitudes about and training in MOUDs among youth-serving professionals. We extended prior research by conducting descriptive analyses of attitudes regarding effectiveness and acceptability of MOUDs, as well as training in MOUDs, among youth legal system (YLS) employees and community mental health center (CMHC) personnel who interface professionally with youth.

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Selenium (Se) is physiologically essential for thyroid function. However, epidemiological studies on the association between Se status and thyroid function are limited and the results are inconsistent. Therefore, we explored this association in an elderly Chinese population sample.

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Objectives: The integration of these preventive guidelines with Electronic Health Records (EHRs) systems, coupled with the generation of personalized preventive care recommendations, holds significant potential for improving healthcare outcomes. Our study investigates the feasibility of using Large Language Models (LLMs) to automate the assessment criteria and risk factors from the guidelines for future analysis against medical records in EHR.

Materials And Methods: We annotated the criteria, risk factors, and preventive medical services described in the adult guidelines published by United States Preventive Services Taskforce and evaluated 3 state-of-the-art LLMs on extracting information in these categories from the guidelines automatically.

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Cognitive control involves allocating cognitive effort according to internal needs and task demands and the Anterior Cingulate Cortex (ACC) is hypothesized to play a central role in this process. We investigated the neural basis of cognitive control in the ACC of rats performing an adjusting-amount delay discounting task. Decision-making in this this task can be guided by using either a lever-value tracking strategy, requiring a 'resource-based' form of cognitive effort or a lever-biased strategy requiring a 'resistance-based' form of cognitive effort.

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Methodology is described for the synthesis of C derivatives of raloxifene, a prescribed drug for the treatment and prevention of osteoporosis. Studies have explored the incorporation of electron-withdrawing substituents at C of the benzothiophene core. Efficient processes are also examined to introduce hydrogen bond donor and acceptor functionality.

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Clinical perspectives: Treating spinal muscular atrophy.

Mol Ther

August 2024

Department of Neurology, Indiana University, Indianapolis, IN 46202, USA. Electronic address:

Spinal muscular atrophy is a rare and progressive neuromuscular disease that, without treatment, leads to progressive weakness and often death. A plethora of studies have led to the approval of three high-cost and effective treatments since 2016. These treatments, nusinersen, onasemnogene abeparvovec, and risdiplam, have not been directly compared and have varying challenges in administration.

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On Evaluating Black-Box Explainable AI Methods for Enhancing Anomaly Detection in Autonomous Driving Systems.

Sensors (Basel)

May 2024

Computer and Information Technology Department, Purdue School of Engineering and Technology, Indiana University-Purdue University Indianapolis, Indianapolis, IN 46202, USA.

The recent advancements in autonomous driving come with the associated cybersecurity issue of compromising networks of autonomous vehicles (AVs), motivating the use of AI models for detecting anomalies on these networks. In this context, the usage of explainable AI (XAI) for explaining the behavior of these anomaly detection AI models is crucial. This work introduces a comprehensive framework to assess black-box XAI techniques for anomaly detection within AVs, facilitating the examination of both global and local XAI methods to elucidate the decisions made by XAI techniques that explain the behavior of AI models classifying anomalous AV behavior.

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Genetic mutations and chronic inflammation of the colon contribute to the development of colorectal cancer (CRC). Using a murine model of inflammation-induced colon tumorigenesis, we determined how genetic mutations alter colon tumor cell differentiation. Inflammation induced by enterotoxigenic (ETBF) colonization of multiple intestinal neoplasia (Min) mice triggers loss of heterozygosity of causing colon tumor formation.

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RNA processing is a highly conserved mechanism that serves as a pivotal regulator of gene expression. Alternative processing generates transcripts that can still be translated but lead to potentially nonfunctional proteins. A plethora of respiratory viruses, including severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), strategically manipulate the host's RNA processing machinery to circumvent antiviral responses.

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Background: This study investigated effects of rapid high-intensity light-curing (3 s) on increasing transdentinal temperature and cell viability.

Methods: A total of 40 dentin discs (0.5 mm) obtained from human molars were prepared, included in artificial pulp chambers (4.

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Analysis of MicroRNA Cargo in Circulating Extracellular Vesicles from HIV-Infected Individuals with Pulmonary Hypertension.

Cells

May 2024

Division of Pulmonary and Critical Care Medicine, Department of Medicine, University of Kansas Medical Center, Mail Stop 3007, 3901 Rainbow Blvd, Kansas City, KS 66160, USA.

The risk of developing pulmonary hypertension (PH) in people living with HIV is at least 300-fold higher than in the general population, and illicit drug use further potentiates the development of HIV-associated PH. The relevance of extracellular vesicles (EVs) containing both coding as well as non-coding RNAs in PH secondary to HIV infection and drug abuse is yet to be explored. We here compared the miRNA cargo of plasma-derived EVs from HIV-infected stimulant users with (HIV + Stimulants + PH) and without PH (HIV + Stimulants) using small RNA sequencing.

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Chromosomal translocations of the nucleoporin 98 (NUP98) gene are found in acute myeloid leukemia (AML) patients leading to very poor outcomes. The oncogenic activity of NUP98 fusion proteins is dependent on the interaction between Mixed Lineage Leukemia 1 and menin. NUP98-rearranged (NUP98-r) leukemia cells also rely on specific kinases, including CDK6 and/or FLT3, suggesting that simultaneous targeting of these kinases and menin could overcome limited sensitivity to single agents.

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Pulmonary arterial hypertension (PAH) is a progressive disease characterized by pulmonary vascular remolding and occlusion, leading to the elevated pulmonary arterial pressures, right ventricular hypertrophy, and eventual heart failure if left untreated. Understanding the molecular mechanisms underlying the development and progression of pulmonary hypertension (PH) is crucial for devising efficient therapeutic approaches for the disease. Lung homogenates were collected weekly and underwent RNA-sequencing in the monocrotaline (MCT)-induced PH rat model to explore genes associated with PH progression.

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Binge drinking (BD) contributes strongly to the harms of alcohol use disorder. Most rodent models do not result in binge-level blood alcohol concentrations (BACs), and to better understand individual and sex differences in neurobiological mechanisms related to BD, the use of outbred rat strains would be valuable. Here, we developed a novel BD model where after 3+ months of intermittent access to 20% alcohol Wistar rats drank, twice a week, with two 5-min intake (what we called Two-shot) separated by a 10-min break.

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Chopping down antibodies for a good cause.

Mol Ther

July 2024

Herman B Wells Center for Pediatric Research, Indiana University, Indianapolis, IN 46202, USA.

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Basal ATP release signals through the P2Y receptor to maintain the differentiated phenotype of vascular smooth muscle cells.

Atherosclerosis

August 2024

Department of Biochemistry, Christopher S. Bond Life Sciences Center, University of Missouri, 1201 Rollins Road, Columbia, MO, 65211, USA. Electronic address:

Background And Aims: Vascular smooth muscle cell (VSMC) dedifferentiation contributes substantively to vascular disease. VSMCs spontaneously release low levels of ATP that modulate vessel contractility, but it is unclear if autocrine ATP signaling in VSMCs is critical to the maintenance of the VSMC contractile phenotype.

Methods: We used pharmacological inhibitors to block ATP release in human aortic smooth muscle cells (HASMCs) for studying changes in VSMC differentiation marker gene expression.

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Association of domain-general speed of information processing with spoken language outcomes in prelingually-deaf children with cochlear implants.

Hear Res

September 2024

Department of Otolaryngology - Head and Neck Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA; Department of Psychiatry, Indiana University School of Medicine, Indianapolis, IN 46202, USA; Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN 47405, USA.

Spoken language development after pediatric cochlear implantation requires rapid and efficient processing of novel, degraded auditory signals and linguistic information. These demands for rapid adaptation tax the information processing speed ability of children who receive cochlear implants. This study investigated the association of speed of information processing ability with spoken language outcomes after cochlear implantation in prelingually deaf children aged 4-6 years.

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