Molecular detection of bacteria in plant tissues, using universal 16S ribosomal DNA degenerated primers.

Highly specific, sensitive and rapid tests are required for the detection and identification of covert bacterial contaminations in plant tissue cultures. Current methods available for this purpose are tedious, time consuming, highly error prone, expensive, require advanced technical expertise and are sometimes ineffective. We report here the development of a sensitive polymerase chain reaction (PCR) based method for the rapid detection and identification of bacteria occurring in plant tissue cultures.

Variable responses of the depth of tree nitrogen uptake to pruning and competition.

Trees in cropped fields may improve nitrogen (N) use efficiency by intercepting leached N, but crop yield will be reduced if the trees compete strongly with crops for N. Ideal trees for intercropping will take up N from deeper soil layers not accessed by the crop species. Spatiotemporal aspects of tree nitrogen capture niches were investigated within a hedgerow intercropping system by placing 15N at three depths and monitoring 15N uptake by trees pruned either 25 or 4 days before application of 15N.

Influence of genetic merit and environment on somatic cell counts of Holstein-Friesian cows.

Financially, mastitis is one of the most important diseases affecting dairy cattle in the United Kingdom. Seven commercial farms were monitored over a 2.5 year period and data from 1040 cows were included in a study that examined both straw yard and cubicle housing systems.

Distribution and diversity of rhizobia nodulating agroforestry legumes in soils from three continents in the tropics.

The natural rhizobial populations of Calliandra calothyrsus, Gliricidia sepium, Leucaena leucocephala and Sesbania sesban were assessed in soils from nine sites across tropical areas of three continents. The rhizobial population size varied from undetectable numbers to 1.8 x 104 cells/g of soil depending on the trap host and the soil.

Modelling plant virus epidemics in a plantation-nursery system.

The material used for propagation and planting of many perennial crop plants is derived from vegetative cuttings which are first multiplied in a nursery. This situation was modelled to analyse the dynamics of a plant virus epidemic in a combined nursery-plantation system and the comparative effects of disease management activities in the plantation and in the nursery. The plant populations were partitioned into healthy and diseased categories and were linked according to basic SI models of disease transmission.

Expression profiling of the host response to bacterial infection: the transition from basal to induced defence responses in RPM1-mediated resistance.

Changes in transcription in leaves of Arabidopsis thaliana were characterised following challenge with strains of Pseudomonas syringae pv. tomato DC3000 allowing differentiation of basal resistance (hrpA mutants), gene-specific resistance (RPM1-specified interactions) and susceptibility (wild-type pathogen). In planta avirulence gene induction, changes in host [Ca2+]cyt and leaf collapse were used to delineate the transition from infection to induced resistance.

Differential expression of genes encoding Arabidopsis phospholipases after challenge with virulent or avirulent Pseudomonas isolates.

Phospholipase D (PLD; EC 3.1.4.

Landing responses of Anopheles gambiae elicited by oxocarboxylic acids.

A wind tunnel bioassay and video system were used to observe Anopheles gambiae Giles sensu stricto (Diptera: Culicidae) landing on glass cylinders, heated to human skin temperature (34 degrees C) and treated with aqueous solutions of oxocarboxylic acids. Six of nine compounds tested: 2-oxobutanoic, 2-oxo-3-methylbutanoic, 2-oxopentanoic, 2-oxo-3-methylpentanoic, 2-oxo-4-methylpentanoic and 2-oxohexanoic elicited significant landing responses in comparison to a water control. Landing responses appeared to be restricted to C4-C6, 2-oxocarboxylic acids.

Application of hazard analysis critical control points (HACCP) to organic chemical contaminants in food.

Hazard Analysis Critical Control Points (HACCP) is a systematic approach to the identification, assessment, and control of hazards that was developed as an effective alternative to conventional end-point analysis to control food safety. It has been described as the most effective means of controlling foodborne diseases, and its application to the control of microbiological hazards has been accepted internationally. By contrast, relatively little has been reported relating to the potential use of HACCP, or HACCP-like procedures, to control chemical contaminants of food.

Nuclear, cytoplasmic, and environmental effects on growth, fat, and muscle traits in suffolk lambs from a sire referencing scheme.

Maternal effects are an important source of variation in early growth and body traits in sheep but are often excluded from genetic analyses. Maternal additive genetic, maternal environmental, and cytoplasmic effects were investigated in a large Suffolk breeding scheme using a range of models involving different combinations of these effects with the direct additive genetic effect. Weights at 8 wk of age and at scanning (mean age 146 d) and ultrasonically measured muscle and fat depth were analyzed using an animal model on 55,683 (8-wk weight) and 28,947 (scanning traits) lamb records.

Characterization and evolution of a myrosinase from the cabbage aphid Brevicoryne brassicae.

The aphid myrosinase gene has been elucidated using Rapid Amplification of cDNA Ends-PCR. Sequencing has shown that aphid myrosinase has significant sequence similarity (35%) to plant myrosinases and other members of glycosyl hydrolase family 1 (GHF1). The residues acting as proton donor and nucleophile, in the hydrolysis of glucosinolates by aphid myrosinase, are identified as Glu 167 and Glu 374 respectively.

Spatial organization of the glucosinolate-myrosinase system in brassica specialist aphids is similar to that of the host plant.

Secondary metabolites are important in plant defence against pests and diseases. Similarly, insects can use plant secondary metabolites in defence and, in some cases, synthesize their own products. The paper describes how two specialist brassica feeders, Brevicoryne brassicae (cabbage aphid) and Lipaphis erysimi (turnip aphid) can sequester glucosinolates (thioglucosides) from their host plants, yet avoid the generation of toxic degradation products by compartmentalizing myrosinase (thioglucosidase) into crystalline microbodies.

Cryopreservation of plumular explants of coconut (Cocos nucifera L.) to support programmes for mass clonal propagation through somatic embryogenesis.

Callus growth has been observed from plumules of ecotype Laguna Tall after cryopreservation using an encapsulation/dehydration protocol. Sucrose preculture treatment and silica gel dehydration both significantly influenced the frequency of callus formation from non-frozen and frozen plumules. The greatest frequency of post-thaw callus growth occurred after incubation of the encapsulated plumules for 72-96 h in medium containing 0.

Environmental issues in the post-communist Ukraine.

The Ukraine, which gained independence in 1991, faces serious problems related to environmental degradation. Environmental problems contribute to a deterioration in human health and a negative trend in population growth. Both form part of a raft of socio-economic problems encountered during the country's transition to a free market economy.

Genetics of milk yield and fertility traits in Holstein-Friesian cattle on large-scale Kenyan farms.

Purebred Holstein-Friesian cows are the main exotic breed used for milk production on large, medium, and small farms in Kenya. A study was undertaken on seven large-scale farms to investigate the genetic trends for milk production and fertility traits between 1986 and 1997 and the genetic relationships between the traits. This involved 3,185 records from 1,614 cows, the daughters of 253 sires.

Changes in fatty acid composition during development of tissues of coconut (Cocos nucifera L.) embryos in the intact nut and in vitro.

Intact coconuts were germinated in situ and compared with excised zygotic embryos germinated in vitro. The growth of the embryonic tissue and their fatty acid compositions were measured. Haustoria, plumules and radicles of coconuts germinated in situ grew continuously and proportionately throughout the 120 d experiment with haustauria increasing to 45 g x nut(-1) and weighing 4-5-fold more than the other two tissues.

Movement of water and heavy metals (Zn, Cu, Pb and Ni) through sand and sandy loam amended with biosolids under steady-state hydrological conditions.

New guidelines for using biosolids in UK agriculture favour the use of enhanced treated biosolids, such as dried and composted cakes, due to concerns about the potential for transfer of pathogens into the food chain. However, there is a need to ensure that their use is environmentally acceptable and does not increase the risk to potable water supplies or the food chain from other contaminants such as heavy metals and xenobiotic organic chemicals. The objective of this study was to determine whether the use of composted and dried mesophilic anaerobically digested dewatered (MADD) biosolids would increase the risk of heavy metal leaching from cultivated horizons when compared to more conventionally used MADD cake.

The effects of elevated CO on seed production and seedling recruitment in a sheep-grazed pasture.

Seed production and seedling recruitment were measured over 2 years under ambient (360 ppm) and elevated (475 ppm) atmospheric CO in a free air carbon dioxide enrichment (FACE) experiment, carried out in a sheep-grazed pasture on dry, sandy soil in New Zealand. In both years elevated CO led to more dispersed seeds of the grasses Anthoxanthum odoratum, Lolium perenne and Poa pratensis, the legumes Trifolium repens and T. subterraneum and the herbs Hypochaeris radicata and Leontodon saxatilis.

Immunocytochemical localization of HrpA and HrpZ supports a role for the Hrp pilus in the transfer of effector proteins from Pseudomonas syringae pv. tomato across the host plant cell wall.

The Hrp pilus, composed of HrpA subunits, is an essential component of the type III secretion system in Pseudomonas syringae. We used electron microscopy (EM) and immunocytochemistry to examine production of the pilus in vitro from P. syringae pv.

Symbiotic specificity of tropical tree rhizobia for host legumes.

• The host range and specificity is reported of a genetically diverse group of rhizobia isolated from nodules of Calliandra calothyrsus, Gliricidia sepium, Leucaena leucocephala and Sesbania sesban. • Nodule number and nitrogen content was measured in seedlings of herbaceous and woody legume species after inoculation with rhizobial strains isolated from tropical soils, to establish symbiotic effectiveness groups for rhizobial strains and their hosts. • Specificity for nodulation and N fixation varied greatly among the legumes.

Extracellular Ba2+ and voltage interact to gate Ca2+ channels at the plasma membrane of stomatal guard cells.

Ca2+ channels at the plasma membrane of stomatal guard cells contribute to increases in cytosolic free [Ca2+] ([Ca2+](i)) that regulate K+ and Cl- channels for stomatal closure in higher-plant leaves. Under voltage clamp, the initial rate of increase in [Ca2+](i) in guard cells is sensitive to the extracellular divalent concentration, suggesting a close interaction between the permeant ion and channel gating. To test this idea, we recorded single-channel currents across the Vicia guard cell plasma membrane using Ba2+ as a charge carrying ion.

A biological approach to lactation curve analysis for milk yield.

Lactation records of milk yield are commonly analyzed with empirical mathematical models. A family of new models is described based on the known biology of the mammary gland during pregnancy and lactation. The new models fit two logistic curves representing secretory cell differentiation and cell death (apoptosis) throughout lactation.

Purification and characterisation of a non-plant myrosinase from the cabbage aphid Brevicoryne brassicae (L.).

Plant myrosinases and glucosinolates constitute a defence system in cruciferous plants towards pests and diseases. We have purified for the first time a non-plant myrosinase from the cabbage aphid Brevicoryne brassicae (L.) to homogeneity.

Sexual development and sex chromosomes in hop.

The stages of floral development in staminate and pistillate plants of hop (Humulus lupulus) were defined using scanning electron microscopy and light microscopy. Vegetative meristems of male and female plants are morphologically indistinguishable. On transition to the reproductive phase, inflorescence apices reduce greatly in size and striking developmental sex differences become apparent.

Localization and control of expression of Nt-Syr1, a tobacco SNARE protein.

Syntaxins and other SNARE proteins are crucial for intracellular vesicle trafficking, fusion and secretion. Previously, we isolated the syntaxin-related protein Nt-Syr1 from Nicotiana in a screen for ABA-related signalling elements, and demonstrated its role in determining the ABA sensitivity of stomatal guard cells. Because the location and expression of SNAREs are often important clues to their functioning, we have examined the distribution and stimulus-dependent expression of Nt-Syr1 between tissues, as well as its location within the cell, using antisera raised against purified recombinant peptides corresponding to overlapping cytosolic domains of Nt-Syr1.