466 results match your criteria: "Ilse Katz Institute for Nanoscale Science and Technology[Affiliation]"

Imaging Flow Cytometry Illuminates New Dimensions of Amyloid Peptide-Membrane Interactions.

Biophys J

March 2020

Department of Chemistry, Ben-Gurion University of the Negev, Beersheba, Israel; Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beersheba, Israel. Electronic address:

Membrane interactions of amyloidogenic proteins constitute central determinants both in protein aggregation as well as in amyloid cytotoxicity. Most reported studies of amyloid peptide-membrane interactions have employed model membrane systems combined with application of spectroscopy methods or microscopy analysis of individual binding events. Here, we applied for the first time, to our knowledge, imaging flow cytometry for investigating interactions of representative amyloidogenic peptides, namely, the 106-126 fragment of prion protein (PrP(106-126)) and the human islet amyloid polypeptide (hIAPP), with giant lipid vesicles.

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Electronic Structure Engineering of Carbon Nitride Materials by Using Polycyclic Aromatic Hydrocarbons.

Chemistry

May 2020

Department of Chemistry and Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer-Sheva, 8410501, Israel.

The design of charge separation sites under illumination in semiconductors is a standing challenge for their utilization as photo(electro)catalysts. Here, the synthesis of modified carbon nitride materials (CNs) with donor-acceptor (D-A) domains, with altering electronic structure, is reported. To do so, new monomers based on polycyclic aromatic hydrocarbons (PAH)-substituted 1,3,5-triazine were designed, which were then embedded within cyanuric acid-melamine supramolecular assemblies to form CN precursors.

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Kinesin-5 motors organize mitotic spindles by sliding apart microtubules. They are homotetramers with dimeric motor and tail domains at both ends of a bipolar minifilament. Here, we describe a regulatory mechanism involving direct binding between tail and motor domains and its fundamental role in microtubule sliding.

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Comparative transcriptomic and metabolic analysis of wild and domesticated wheat genotypes reveals differences in chemical and physical defense responses against aphids.

BMC Plant Biol

January 2020

French Associates Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 8499000, Midreseht Ben Gurion, Beer-Sheva, Israel.

Background: Young wheat plants are continuously exposed to herbivorous insect attack. To reduce insect damage and maintain their growth, plants evolved different defense mechanisms, including the biosynthesis of deterrent compounds named benzoxazinoids, and/or trichome formation that provides physical barriers. It is unclear whether both of these mechanisms are equally critical in providing an efficient defense for wheat seedlings against aphids-an economically costly pest in cereal production.

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Integrative Model to Coordinate the Oligomerization and Aggregation Mechanisms of CCL5.

J Mol Biol

February 2020

Institute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan; Department of Life Science, National Tsing Hua University, Hsinchu, 30013, Taiwan. Electronic address:

CC-type chemokine ligand 5 (CCL5) is involved in the pathogenesis of many inflammatory conditions. Under physiological conditions, CCL5 oligomerization and aggregation are considered to be responsible for its inflammatory properties. The structural basis of CCL5 oligomerization remains controversial because the current oligomer models contain no consensus interactions.

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The construction of artificial solar fuel generating systems requires the heterogenization of large quantities of catalytically active sites on electrodes. In that sense, metal-organic frameworks (MOFs) have been utilized to assemble unpreceded concentration of electrochemically active molecular catalysts to drive energy-conversion electrocatalytic reactions. However, despite recent advances in MOF-based electrocatalysis, so far no attempt has been made to exploit their unique chemical modularity in order to tailor the electrocatalytic function of MOF-anchored active sites at the molecular level.

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Simplified methodology for a modular and genetically expanded protein synthesis in cell-free systems.

Synth Syst Biotechnol

December 2019

Department of Life Sciences and Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev, P.O.Box. 653, Beer-Sheva, 8410501, Israel.

Genetic code expansion, which enables the site-specific incorporation of unnatural amino acids into proteins, has emerged as a new and powerful tool for protein engineering. Currently, it is mainly utilized inside living cells for a myriad of applications. However, the utilization of this technology in a cell-free, reconstituted platform has several advantages over living systems.

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Entropy is a fundamental thermodynamic quantity indicative of the accessible degrees of freedom in a system. While it has been suggested that the entropy of a mesoscopic system can yield nontrivial information on emergence of exotic states, its measurement in such small electron-number system is a daunting task. Here we propose a method to extract the entropy of a Coulomb-blockaded mesoscopic system from transport measurements.

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Self-Assembly of DNA Origami Heterodimers in High Yields and Analysis of the Involved Mechanisms.

Small

December 2019

Department of Chemistry and the Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, 84105, Israel.

Efficient fabrication of structurally and functionally diverse nanomolecular devices and machines by organizing separately prepared DNA origami building blocks into a larger structure is limited by origami attachment yields. A general method that enables attachment of origami building blocks using 'sticky ends' at very high yields is demonstrated. Two different rectangular origami monomers are purified using agarose gel electrophoresis conducted in solute containing 100 × 10 m NaCl, a treatment that facilitates the dissociation of most of the incorrectly hybridized origami structures that form through blunt-end interactions during the thermal annealing process and removes these structures as well as excess strands that otherwise interfere with the desired heterodimerization reaction.

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Physico-chemical characteristics of the sulfated polysaccharides of the red microalgae Dixoniella grisea and Porphyridium aerugineum.

Int J Biol Macromol

February 2020

Avram and Stella Goldstein-Goren Department of Biotechnology Engineering, Ben-Gurion University of the Negev, P.O. Box 653, Beer-Sheva 84105, Israel. Electronic address:

The sulfated polysaccharides of red microalgae have attracted increasing attention in recent years due to their unique rheological and bioactivities. Todate, most studies are devoted to the polysaccharide of the marine species Porphyridium sp., with limited information about that of the brackish water- Dixoniella grisea and the freshwater- Porphyridium aerugineum.

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Self-Assembled Peptide Nanotube Films with High Proton Conductivity.

J Phys Chem B

November 2019

Department of Materials Engineering and Ilse Katz Institute for Nanoscale Science and Technology , Ben-Gurion University of the Negev, P.O.B. 653, Beer-Sheva 84105 , Israel.

Design flexibility and modularity have emerged as powerful tools in the development of functional self-assembled peptide nanostructures. In particular, the tendency of peptides to form fibrils and nanotubes has motivated the investigation of electron and, more recently, proton transport in their fibrous films. In this study, we present a detailed characterization by impedance spectroscopy of films of self-assembled cyclic octa-d,l-α-peptide self-assembled nanotubes with amine side chains that promote proton transport.

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Photosynthesis is one of the most fundamental and complex mechanisms in nature. It is a well-studied process, however, some photosynthetic mechanisms are yet to be deciphered. One of the many proteins that take part in photosynthesis, cytochrome bd, is a terminal oxidase protein that plays a role both in photosynthesis and in respiration in various organisms, specifically, in cyanobacteria.

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Anisotropic Redox Conductivity within a Metal-Organic Framework Material.

J Am Chem Soc

November 2019

Department of Chemistry , Northwestern University, 2145 Sheridan Road , Evanston 60208 , Illinois , United States.

Engendering electrical conductivity in otherwise insulating metal-organic framework (MOF) materials is key to rendering these materials fully functional for a range of potential applications, including electrochemical and photo-electrochemical catalysis. Here we report that the platform MOF, NU-1000, can be made electrically conductive via reversible electrochemical oxidation of a fraction of the framework's tetraphenylpyrene linkers, where the basis for conduction is redox hopping. At a microscopic level, redox hopping is akin to electron self-exchange and is describable by Marcus' well-known theory of electron transfer.

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MiR-499 Responsive Lethal Construct for Removal of Human Embryonic Stem Cells after Cardiac Differentiation.

Sci Rep

October 2019

The Avram and Stella Goldstein-Goren Department of Biotechnology Engineering, Ben-Gurion University of the Negev, Beer-Sheva, 84105, Israel.

Deriving cell populations from human embryonic stem cells (hESCs) for cell-based therapy is considered a promising strategy to achieve functional cells, yet its translation to clinical practice depends on achieving fully defined differentiated cells. In this work, we generated a miRNA-responsive lethal mRNA construct that selectively induces rapid apoptosis in hESCs by expressing a mutant (S184del) Bax variant. Insertion of miR-499 target sites in the construct enabled to enrich hESC-derived cardiomyocytes (CMs) in culture.

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Animal Eyes: Filtering Out the Background.

Curr Biol

October 2019

Department of Chemistry and The Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer-Sheva, 8410501, Israel. Electronic address:

Animals use photonic structures in their eyes to form images, enhance sensitivity and provide camouflage. A recent exciting discovery shows that the eyes of some larval mantis shrimp possess photonic crystals that function as color filters to detect bioluminescence.

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Simultaneous laser-induced synthesis and micro-patterning of a metal organic framework.

Chem Commun (Camb)

November 2019

Department of Chemistry, Bar-Ilan University, Ramat Gan 5290002, Israel and Institute for Nanotechnology and Advanced Materials, Bar-Ilan University, Ramat Gan, 5290002, Israel.

Micro-patterning of a metal organic framework (MOF) from a solution of precursors is achieved by local laser heating. Nano-sized MOFs are formed, followed by rapid assembly due to convective flows around a heat-induced micro-bubble. This laser-induced bottom-up technique is the first to suggest simultaneous synthesis and micro-patterning of MOFs, alleviating the need for pre-preparation and stabilization.

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Electrochemical sensors are essential for point-of-care testing (POCT) and wearable sensing devices. Establishing an efficient electron transfer route between redox enzymes and electrodes is key for converting enzyme-catalyzed reactions into electrochemical signals, and for the development of robust, sensitive, and selective biosensors. We demonstrate that the site-specific incorporation of a novel synthetic amino acid (2-amino-3-(4-mercaptophenyl)propanoic acid) into redox enzymes, followed by an S-click reaction to wire the enzyme to the electrode, facilitates electron transfer.

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Various types of devices require hierarchically nanopatterned substrates, where the spacing between patterned domains is controlled. Ultraconfined films exhibit extreme morphological sensitivity to slight variations in film thickness when the substrate is highly selective toward one of the blocks. Here, it is shown that using the substrate's topography as a thickness differentiating tool enables the creation of domains with different surface patterns in a fully controlled fashion from a single, unblended block copolymer.

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Beneficial Impurities and Phase Control in Colloidal Synthesis of Tin Monoselenide.

Langmuir

December 2019

Department of Materials Engineering and Ilse Katz Institute for Nanoscale Science and Technology , Ben-Gurion University of the Negev, Beer-Sheva 8410501 , Israel.

The effect of impurities in colloidal synthesis of SnSe in oleylamine surfactant was investigated. Specifically, it was found that impurities such as water, hydrochloric acid, and carbon dioxide stabilize the recently discovered cubic phase of tin monoselenide, π-SnSe. We describe the reaction that releases HCl to the reaction medium through reaction of SnCl with moisture and its subsequent reaction with oleylamine, transforming it from neutral to charged surfactant.

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Quantum Hall edge channels offer an efficient and controllable platform to study quantum transport in one dimension. Such channels are a prospective tool for the efficient transfer of quantum information at the nanoscale, and play a vital role in exposing intriguing physics. Electric current along the edge carries energy and heat leading to inelastic scattering, which may impede coherent transport.

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Structural modifications in carbon nitrides and related carbon-based materials have been achieved in recent years by organizing their monomers into versatile supramolecular structures that serve as reactants for the high temperature solid-state reaction. To date, the organization is usually carried out in one solvent where the building blocks must be dispersed. Here, we show the utilization of a molecule with both hydrogen bond donor and acceptor sites for constructing hydrogen bonded frameworks in interfacial systems.

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Transition-metal-carbon (CTM) composites show ample activity in many catalytic reactions. However, control of composition, distribution, and properties is challenging. Now, a straightforward path for the synthesis of transition-metal nanoparticles engulfed in crystalline carbon is presented with excellent control over the metal composition, amount, ratio, and catalytic properties.

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Octadecylamine-coated CuS nanoparticles were designed and confirmed to play an important role in their electric response and boundary lubrication in the ester lubricant. For the case of CuS nanoparticles coated with crystalline surfactant, the surface potential is 18.47 ± 0.

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Freestanding Hierarchical Carbon Nitride/Carbon-Paper Electrode as a Photoelectrocatalyst for Water Splitting and Dye Degradation.

ACS Appl Mater Interfaces

August 2019

Department of Chemistry and Ilse Katz Institute for Nanoscale Science and Technology , Ben-Gurion University of the Negev, Beer-Sheva 8410501 , Israel.

Freestanding electrodes composed of 2D materials are highly attractive for many applications such as batteries, membranes, actuators, optical devices, and other energy-related devices owing to their low price, unique structure, high specific surface area, and excellent mechanical and electrical properties. Here, we report the facile large-scale fabrication of freestanding hierarchical carbon nitride/carbon electrodes (CN/C) by the in situ crystallization of CN precursors on conductive carbon paper, followed by thermal annealing. The resulting CN exhibits a vertically aligned morphology with a homogeneous layer distribution, improved crystallinity, and excellent contact with the carbon paper.

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Resonant Grating without a Planar Waveguide Layer as a Refractive Index Sensor.

Sensors (Basel)

July 2019

Department of Electrooptics and Photonics Engineering and The Ilse Katz Institute for Nanoscale Science and Technology, School of Electrical and Computer Engineering, Ben Gurion University of the Negev, Beer Sheva 84105, Israel.

Dielectric grating-based sensors are usually based on the guided mode resonance (GMR) obtained using a thin planar waveguide layer (PWL) adjacent to a thin subwavelength grating layer. In this work, we present a detailed investigation of thick subwavelength dielectric grating structures that exhibit reflection resonances above a certain thickness without the need for the waveguide layer, showing great potential for applications in biosensing and tunable filtering. Analytic and numerical results are thoroughly discussed, as well as an experimental demonstration of the structure as a chemical sensor in the SWIR (short wave infrared) spectral range (1200-1800 nm).

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