Effect of fumigation, cover crops, and potato growth on shifts in soil microbial communities.

Fumigation as a broad-spectrum pesticide can affect both pathogenic and non-target microorganisms in the soil. As microbial communities are critical within the soil ecosystem, depletion of or changes in these communities can result in negative implications for soil health. Because cover crops are used to enhance soil health physically, chemically, and biologically, they might recover the soil health of the fumigated soil.

Occurrence of Snake River alfalfa virus in alfalfa () in Oregon and in Northern California.

Alfalfa (Medicago sativa L.) is a commonly grown forage crop in Oregon and California harvested on 350,000 and 480,000 acres, respectively, in 2023 (USDA-NASS 2023). Forage alfalfa is grown as a perennial crop for about four years in the same field and each season, the crop is cut 3-4 times for hay production.

Soil microbial biomass influenced by cover crop after fumigation of potato fields.

Soil fumigation is commonly employed for pest control in potato production, although it can unintentionally harm non-target organisms in the soil. The presence of cover crops can significantly influence the abundance and composition of microorganisms. However, there is limited knowledge regarding the combined impact of soil fumigation and cover crops on soil health in potato fields.

Analysis of soft rot population diversity in US potato growing regions between 2015 and 2022.

Introduction: Soft rot (SRP) bacteria are globally dispersed pathogens that cause significant economic loss in potato and other crops. Our understanding of the SRP species diversity has expanded in recent years due to advances and adoption of whole-genome sequence technologies. There are currently 34 recognized SRP species that belong to the and genera.

Transcriptional and functional predictors of potato virus Y-induced tuber necrosis in potato ().

Introduction: Potato ( L.), the fourth most important food crop in the world, is affected by several viral pathogens with potato virus Y (PVY) having the greatest economic impact. At least nine biologically distinct variants of PVY are known to infect potato.

Genotype-by-environment interactions and local adaptation shape selection in the US National Chip Processing Trial.

We find evidence of selection for local adaptation and extensive genotype-by-environment interaction in the potato National Chip Processing Trial (NCPT). We present a novel method for dissecting the interplay between selection, local adaptation and environmental response in plant breeding schemes. Balancing local adaptation and the desire for widely adapted cultivars is challenging for plant breeders and makes genotype-by-environment interactions (GxE) an important target of selection.

Optimal-Band Analysis for Chlorophyll Quantification in Rice Leaves Using a Custom Hyperspectral Imaging System.

Hyperspectral imaging (HSI) is a promising tool in chlorophyll quantification, providing a non-invasive method to collect important information for effective crop management. HSI contributes to food security solutions by optimising crop yields. In this study, we presented a custom HSI system specifically designed to provide a quantitative analysis of leaf chlorophyll content (LCC).

Optimizing Nitrogen Fertilization to Enhance Productivity and Profitability of Upland Rice Using CSM-CERES-Rice.

Nitrogen (N) deficiency can limit rice productivity, whereas the over- and underapplication of N results in agronomic and economic losses. Process-based crop models are useful tools and could assist in optimizing N management, enhancing the production efficiency and profitability of upland rice production systems. The study evaluated the ability of CSM-CERES-Rice to determine optimal N fertilization rate for different sowing dates of upland rice.

Identification of QTL associated with plant vine characteristics and infection response to late blight, early blight, and Verticillium wilt in a tetraploid potato population derived from late blight-resistant Palisade Russet.

Potato late blight (causal agent ) is a disease of potatoes with economic importance worldwide. Control is primarily through field monitoring and the application of fungicides. Control of late blight with fungicides and host plant resistance is difficult, with documented cases of such control measures failing with the advent of new pathotypes of .

Spatial differences influence nitrogen uptake, grain yield, and land-use advantage of wheat/soybean relay intercropping systems.

Cereal/legume intercropping is becoming a popular production strategy for higher crop yields and net profits with reduced inputs and environmental impact. However, the effects of different spatial arrangements on the growth, grain yield, nitrogen uptake, and land-use advantage of wheat/soybean relay intercropping are still unclear, particularly under arid irrigated conditions. Therefore, in a three-year field study from 2018 to 2021, soybean was relay intercropped with wheat in different crop configurations (0.

Long-term agro-management strategies shape soil bacterial community structure in dryland wheat systems.

Soil microbes play a crucial role in soil organic matter decomposition and nutrient cycling and are influenced by management practices. Therefore, quantifying the impacts of various agricultural management practices on soil microbiomes and their activity is crucial for making informed management decisions. This study aimed to assess the impact of various management systems on soil bacterial abundance and diversity, soil enzyme activities and carbon mineralization potential in wheat-based systems.

Investigating the use of pollen DNA metabarcoding to quantify bee foraging and effects of threshold selection.

DNA metabarcoding of pollen is a useful tool for studying bee foraging ecology. However, several questions about this method remain unresolved, including the extent to which sequence read data is quantitative, which type of sequence count removal threshold to use and how that choice affects our ability to detect rare flower visits, and how sequence artefacts may confound conclusions about bee foraging behavior. To address these questions, we isolated pollen from five plant species and created treatments comprised of pollen from each species alone and combinations of pollen from multiple species that varied in richness and evenness.

Seed Yield, Crude Protein and Mineral Nutrients of Lentil Genotypes Evaluated across Diverse Environments under Organic and Conventional Farming.

Lentil is an important legume crop for human and animal dietary needs due to its high nutritional value. The effect of genotype and growing environment was studied on seed yield (SY), crude protein (CP) and mineral nutrients (macro and micronutrients) of five lentil genotypes grown at four diverse locations for two consecutive years under organic and conventional farming. The location within each year was considered as a separate environment (E).

Chromosomal-level genome assembly of potato tuberworm, Phthorimaea operculella: a pest of solanaceous crops.

The potato tuberworm, Phthorimaea operculella Zeller, is an oligophagous pest feeding on crops mainly belonging to the family Solanaceae. It is one of the most destructive pests of potato worldwide and attacks foliage and tubers in the field and in storage. However, the lack of a high-quality reference genome has hindered the association of phenotypic traits with their genetic basis.

Legacy effects of fumigation on soil bacterial and fungal communities and their response to metam sodium application.

Background: Soil microorganisms are integral to maintaining soil health and crop productivity, but fumigation used to suppress soilborne diseases may affect soil microbiota. Currently, little is known about the legacy effects of soil fumigation on soil microbial communities and their response to fumigation at the production scale. Here, 16S rRNA gene and internal transcribed spacer amplicon sequencing was used to characterize the bacterial and fungal communities in soils from intensively managed crop fields with and without previous exposure to metam sodium (MS) fumigation.

Maize/soybean strip intercropping produces higher crop yields and saves water under semi-arid conditions.

Sustainable increases in crop production require efficient use of resources, and intercropping can improve water use efficiency and land productivity at reduced inputs. Thus, in a three-year field experiment, the performance of maize/soybean strip intercropping system differing with maize plant density (6 maize plants m-2, low, D1; 8 maize plants m-2, medium, D2; and 10 maize plants m-2, high, D3) was evaluated in comparison with sole maize or soybean cropping system. Results revealed that among all intercropping treatments, D2 had a significantly higher total leaf area index (maize LAI + soybean LAI; 8.

Distribution, source apportionment, and risk analysis of heavy metals in river sediments of the Urmia Lake basin.

The anthropogenic heavy metal dissemination in the natural environment through riverine sediments is a major ecological and public health concern around the world. This study gives insight into the source apportionment and potential ecological and health risks of heavy metals in river sediments of the Urmia Lake basin, a natural world heritage located in northwestern Iran. A comprehensive sediment sampling was conducted in seven major rivers feeding the basin during the summer and winter of 2021.

Pest population dynamics are related to a continental overwintering gradient.

Overwintering success is an important determinant of arthropod populations that must be considered as climate change continues to influence the spatiotemporal population dynamics of agricultural pests. Using a long-term monitoring database and biologically relevant overwintering zones, we modeled the annual and seasonal population dynamics of a common pest, (Boddie), based on three overwintering suitability zones throughout North America using four decades of soil temperatures: the southern range (able to persist through winter), transitional zone (uncertain overwintering survivorship), and northern limits (unable to survive winter). Our model indicates population dynamics are hierarchically structured with continental-level effects that are partitioned into three geographic zones.

When do cover crops reduce nitrate leaching? A global meta-analysis.

The global increases in the surface and groundwater nitrate (NO ) concentrations due to synthetic fertilizer input have emerged as major sustainability threats to terrestrial and aquatic ecosystems. Cover crops can reportedly reduce nitrate leaching from croplands. However, the underlying mechanisms and the effectiveness of cover crops in reducing nitrate leaching across species, soil types, agronomic management, and climates remain elusive.

Urbanization influences the distribution, enrichment, and ecological health risk of heavy metals in croplands.

The contamination of urban soils with heavy elements due to the rapid development of urbanization and urban services has become a major environmental and human health challenge. This study provides insight into the urbanization controls on combined pollution severity and health risk potential of heavy metals in corn-cultivated urban versus non-urban soils. A multifaceted assessment was conducted using enrichment factor (EF), ecological risk (ER), bioconcentration factor (BCF), transmission factor (TF), hazard index (HI), and carcinogenic risk (CR).

Genomic markers linked to resistance introgressed from to cultivated potato and their utility in marker-assisted selection.

Unlabelled: is a major threat to potato production in the Pacific Northwest region of the United States. Infected tubers are rendered unmarketable; hence, growers' profitability is adversely affected. Breeding for nematode resistance is a long-term process and phenotyping the segregating populations for nematode resistance is the most time-consuming and laborious part of the process.

Flight Potential of Western Tarnished Plant Bug (Hemiptera: Miridae).

The western tarnished plant bug, Lygus hesperus Knight, is an economically important pest of several agricultural crops in the western United States. It is an increasing threat to potato, Solanum tuberosum L. (Solanales: Solanaceae), in the diverse landscape of the Columbia Basin of Oregon and Washington.

Predicting Phenology of Four Major Hemipteran Pests to Enhance Integrated Pest Management Programs in Potatoes in the Lower Columbia Basin.

The potato crop (Solanum tuberosum L.) is affected by various hemipteran insect pests including Circulifer tenellus Baker, Lygus spp., Myzus persicae Sulzer, and Macrosiphum euphorbiae Thomas.