570 results match your criteria: "Graduate School of Information Sciences[Affiliation]"

Objective: Pain is subjective, and self-reporting pain might be challenging. Studies conducted to detect pain using biological signals and real-time self-reports pain are limited. We evaluated the feasibility of collecting pain data on healthy females' menstrual pain and conducted preliminary analysis.

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Persistent prey species in the Lotka-Volterra apparent competition system with a single shared predator.

J Math Biol

January 2025

Department of Computer and Mathematical Sciences, Research Center for Pure and Applied Mathematics, Graduate School of Information Sciences, Tohoku University, Aramaki-Aza-Aoba 6-3-09, Aoba-ku, Sendai, Miyagi, 980-8579, Japan.

We analyze the Lotka-Volterra n prey-1 predator system with no direct interspecific interaction between prey species, in which every prey species undergoes the effect of apparent competition via a single shared predator with all other prey species. We prove that the considered system necessarily has a globally asymptotically stable equilibrium, and we find the necessary and sufficient condition to determine which of feasible equilibria becomes asymptotically stable. Such an asymptotically stable equilibrium shows which prey species goes extinct or persists, and we investigate the composition of persistent prey species at the equilibrium apparent competition system.

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Large-scale population cohort studies that collect genomic information are tasked with returning an assessment of genetic risk for hereditary cancers to participants. While several studies have applied to return identified genetic risks to participants, comprehensive surveys of participants' understanding, feelings, and behaviors toward cancer risk remain to be conducted. Here, we report our experience and surveys of returning genetic risks to 100 carriers of pathogenic variants for hereditary cancers identified through whole genome sequencing of 50 000 individuals from the Tohoku Medical Megabank project, a population cohort study.

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Background: Chronic kidney disease (CKD) causes progressive and irreversible damage to the kidneys. Renal biopsies are essential for diagnosing the etiology and prognosis of CKD, while accurate quantification of tubulo-interstitial injuries from whole slide images (WSIs) of renal biopsy specimens is challenging with visual inspection alone.

Methods: We develop a deep learning-based method named DLRS to quantify interstitial fibrosis and inflammatory cell infiltration as tubulo-interstitial injury scores, from WSIs of renal biopsy specimens.

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Directional intermodular coupling enriches functional complexity in biological neuronal networks.

Neural Netw

November 2024

Research Institute of Electrical Communication (RIEC), Tohoku University, Sendai, Japan; Graduate School of Engineering, Tohoku University, Sendai, Japan.

Hierarchically modular organization is a canonical network topology that is evolutionarily conserved in the nervous systems of animals. Within the network, neurons form directional connections defined by the growth of their axonal terminals. However, this topology is dissimilar to the network formed by dissociated neurons in culture because they form randomly connected networks on homogeneous substrates.

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To tackle disorder in crystals and short- and intermediate-range order in amorphous materials, such as glass, we developed a carry-in diffractometer to utilise X-ray fluorescence holography (XFH) and anomalous X-ray scattering (AXS), facilitating element-specific analyses with atomic resolution using the wavelength tunability of a synchrotron X-ray source. Our diffractometer unifies XFH and AXS configurations to determine the crystal orientation via diffractometry. In particular, XFH was realised even for a crystal with blurred emission lines by a standing wave in a hologram, and high-throughput AXS with sufficient count statistics and energy resolution was achieved using three multi-array detectors with crystal analysers.

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Garment Recognition and Reconstruction Using Object Simultaneous Localization and Mapping.

Sensors (Basel)

November 2024

Department of System Information Sciences, Graduate School of Information Sciences, Tohoku University, Aoba-ku, Sendai 980-8579, Japan.

The integration of robotics in the garment industry remains relatively limited, primarily due to the challenges in the highly deformable nature of garments. The objective of this study is thus to explore a vision-based garment recognition and environment reconstruction model to facilitate the application of robots in garment processing. Object SLAM (Simultaneous Localization and Mapping) was employed as the core methodology for real-time mapping and tracking.

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The involvement of drug-metabolizing enzymes and transporters in plasma clozapine (CLZ) dynamics has not been well examined in Japanese patients with treatment-resistant schizophrenia (TRS). Therefore, this clinical study investigated the relationship between single nucleotide polymorphisms (SNPs) of various pharmacokinetic factors (drug-metabolizing enzymes and transporters) and dynamic changes in CLZ. Additionally, we aimed to determine whether CLZ acts as a substrate for pharmacokinetic factors using in vitro assays and molecular docking calculations.

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Most current databases for bodily emotion expression are created in Western countries, resulting in culturally skewed representations. To address the obvious risk this bias poses to academic comprehension, we attempted to expand the current repertoire of human bodily emotions by recruiting Asian professional performers to wear whole-body suits with 57 retroreflective markers attached to major joints and body segments, and express seven basic emotions with whole-body movements in a motion-capture lab. For each emotion, actors performed three self-created scenarios that covered a broad range of real-life events to elicit the target emotion within 2-5 seconds.

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Article Synopsis
  • Recent studies show AI's potential in detecting heart issues through ECGs, but specific waveforms are still unclear.
  • This research analyzed data from over 17,000 cases in Japan and Germany, focusing on using deep learning for diagnosing left ventricular dysfunction.
  • The study found that two-beat ECGs were the most effective for identifying heart problems, with the QRS to T-wave segments providing the best insights, especially using limb leads I and aVR.
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Laccase-catalyzed tyrosine click reaction with 1-methyl-4-arylurazole: rapid labeling on protein surfaces.

Chem Commun (Camb)

November 2024

Frontier Research Institute for Interdisciplinary Sciences, Tohoku University, 6-3 Aramaki aza-Aoba, Aoba-ku, Sendai, Miyagi 980-8578, Japan.

Article Synopsis
  • - The study highlights the effectiveness of 1-methyl-4-arylurazole (MAUra) for labeling tyrosine, focusing on its optimized use with laccase under gentle conditions.
  • - It achieves a high labeling efficiency, quantified at 7.88 × 10 M s, indicating rapid and effective results.
  • - The method minimizes unwanted oxidative side reactions and selectively targets highly exposed tyrosine sites on proteins, making it a valuable tool in biochemical research.
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Chronic obstructive pulmonary disease (COPD) is a highly prevalent disease, making it a leading cause of death worldwide. Several genome-wide association studies (GWAS) have been conducted to identify loci associated with COPD. However, different ancestral genetic compositions for the same disease across various populations present challenges in studies involving multi-population data.

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Article Synopsis
  • The investigation focused on the local structure of the two-dimensional layered material BiRhSe, which exhibits both superconducting and charge-density wave states.
  • The study utilized X-ray fluorescence holography to analyze the crystal structure at temperatures of 300 K and 200 K, revealing significant changes in atomic arrangement around the critical temperature of 240 K.
  • The results suggest a supercell structure for BiRhSe below the CDW transition, providing crucial insights into the relationship between the superconducting and charge-density wave states.
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Article Synopsis
  • The study investigates the use of a real-time, continuous system that manipulates a virtual arm using electromyogram (EMG) signals, unlike previous methods that relied on machine learning or trigger controls for specific motions.
  • An experiment involving seven healthy participants was conducted to assess changes in their motor control strategies after experiencing the physio-avatar EMG biofeedback system, which aims to induce physiological changes through new interactions.
  • Results showed that while participants initially adapted their motor control strategies using the physio-avatar system, they eventually reverted to their original strategies, indicating a significant impact on their motor control but also a tendency to return to baseline after the intervention.
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Next-generation sequencing (NGS) has become widely available and is routinely used in basic research and clinical practice. The reference genome sequence is an essential resource for NGS analysis, and several population-specific reference genomes have recently been constructed to provide a choice to deal with the vast genetic diversity of human samples. However, resources supporting population-specific references are insufficient, and it is burdensome to perform analysis using these reference genomes.

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Image quality improvement in single plane-wave imaging using deep learning.

Ultrasonics

January 2025

Konica Minolta, Inc., 1-2, Sakura-machi, Takatsuki-shi, 5698503, Osaka, Japan.

In ultrasound image diagnosis, single plane-wave imaging (SPWI), which can acquire ultrasound images at more than 1000 fps, has been used to observe detailed tissue and evaluate blood flow. SPWI achieves high temporal resolution by sacrificing the spatial resolution and contrast of ultrasound images. To improve spatial resolution and contrast in SPWI, coherent plane-wave compounding (CPWC) is used to obtain high-quality ultrasound images, i.

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This study explores the challenge of differentiating autism spectrum (AS) from non-AS conditions in adolescents and adults, particularly considering the heterogeneity of AS and the limitations ofssss diagnostic tools like the ADOS-2. In response, we advocate a multidimensional approach and highlight lexicogrammatical analysis as a key component to improve diagnostic accuracy. From a corpus of spoken language we developed, interviews and story-recounting texts were extracted for 64 individuals diagnosed with AS and 71 non-AS individuals, all aged 14 and above.

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Whole-Head Noninvasive Brain Signal Measurement System with High Temporal and Spatial Resolution Using Static Magnetic Field Bias to the Brain.

Bioengineering (Basel)

September 2024

Graduate School of Information Sciences, Hiroshima City University, 3-4-1 Ozuka-Higashi, Asa-Minami-Ku, Hiroshima 731-3194, Japan.

Noninvasive brain signal measurement techniques are crucial for understanding human brain function and brain-machine interface applications. Conventionally, noninvasive brain signal measurement techniques, such as electroencephalography, magnetoencephalography, functional magnetic resonance imaging, and near-infrared spectroscopy, have been developed. However, currently, there is no practical noninvasive technique to measure brain function with high temporal and spatial resolution using one instrument.

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The motivating question for this study is determining whether electrical muscle stimulation (EMS)-induced movements can extend the user's ability without reducing the sense of agency. Moreover, it is crucial to find the timing of the EMS application that is robust against individual differences and environmental changes. Previous studies have reported that the user-specific EMS-application timings, determined through explicit measures of sense of agency, would effectively shorten their reaction time in a push task while maintaining their sense of agency.

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Functional significance of CYP2B6 gene rare allelic variants identified in Japanese individuals.

Biochem Pharmacol

November 2024

Laboratory of Pharmacotherapy of Life-Style Related Diseases, Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan; Advanced Research Center for Innovations in Next-Generation Medicine, Tohoku University, Sendai 980-8573, Japan; Tohoku Medical Megabank Organization, Tohoku University, Sendai 980-8573, Japan; Department of Pharmaceutical Sciences, Tohoku University Hospital, Sendai 980-8574, Japan. Electronic address:

Article Synopsis
  • - The enzyme CYP2B6 is crucial for metabolizing drugs like efavirenz and propofol, and genetic variations in the CYP2B6 gene can alter its effectiveness and lead to side effects.
  • - This study examined 29 rare genetic variants of CYP2B6 found in a large Japanese population, showing that some variants significantly reduce enzyme activity.
  • - Researchers used techniques like western blotting and molecular simulations to identify how structural changes in the enzyme affect its function, which could aid in predicting drug metabolism and minimizing adverse effects.
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Few population-based studies including younger adults have examined the potential of olfactory function tests to capture the degree of atrophy in memory-associated brain regions, which cannot be adequately explained by cognitive function tests screening for cognitive impairment. This population-based study investigated associations between high-resolution olfactory test data with few odours and grey matter volumes (GMVs) of the left and right hippocampi, amygdala, parahippocampi, and olfactory cortex, while accounting for differences in cognitive decline, in 1444 participants (aged 31-91 years). Regression analyses included intracranial volume (ICV)-normalised GMVs of eight memory-related regions as objective variables and age, sex, education duration, smoking history, olfaction test score, and the Montreal Cognitive Assessment-Japanese version (MoCA-J) score as explanatory variables.

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Isotropy of Cosmic Rays beyond 10^{20}  eV Favors Their Heavy Mass Composition.

Phys Rev Lett

July 2024

High Energy Astrophysics Institute and Department of Physics and Astronomy, University of Utah, Salt Lake City, Utah 84112-0830, USA.

We report an estimation of the injected mass composition of ultrahigh energy cosmic rays (UHECRs) at energies higher than 10 EeV. The composition is inferred from an energy-dependent sky distribution of UHECR events observed by the Telescope Array surface detector by comparing it to the Large Scale Structure of the local Universe. In the case of negligible extragalactic magnetic fields (EGMFs), the results are consistent with a relatively heavy injected composition at E∼10  EeV that becomes lighter up to E∼100  EeV, while the composition at E>100  EeV is very heavy.

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