335 results match your criteria: "Georg-August-Universität Göttingen Tammannstrasse 6[Affiliation]"

Rotational spectroscopy is an excellent tool for structure determination, which can provide additional insights into local electronic structure by investigating the hyperfine pattern due to nuclear quadrupole coupling. Jet-cooled molecules are good experimental benchmark targets for electronic structure calculations, as they are free of environmental effects. We report the rotational spectra of 2-chlorobenzaldehyde, 3-chlorobenzaldehyde, and 4-chlorobenzaldehyde, including a complete experimental description of the nuclear quadrupole coupling constants, which were previously not experimentally determined.

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Salt metathesis of dinickel(II) complex LNiBr (1; L is a dinucleating pyrazolate ligand with two β-diketiminato chelate arms) with Na(OCP) ⋅ (dioxane) yielded LNi(PCO) (2) with a P-bridging phosphaethynolate. Further reaction of 2 with benzyl isocyanide or with an N-heterocyclic carbene (NHC) triggered decarbonylation and gave LNi(PCN-CHPh) (3) and LNiP(NHC) (4) with P-bridging cyanophosphide and NHC-phosphinidenide, respectively. Electronic structure analysis indicated a μ-η : η binding mode of the PCO anion between the two Ni ions in 2, which is even more pronounced for the [PCN(-CHPh)] anion in 3.

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Local Electronic Correlation in Multicomponent Møller-Plesset Perturbation Theory.

J Chem Theory Comput

November 2024

Institute of Physical Chemistry, University of Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany.

Article Synopsis
  • This paper presents the first application of local correlation in multicomponent methods, which simulate electrons alongside other Fermions like protons to study nuclear quantum effects.
  • The authors highlight the computational inefficiency of traditional wave function theories in capturing dynamic correlations and introduce local correlation approaches using pair natural orbitals (PNOs) for better efficiency.
  • They discuss their implementation of density-fitted NEO-MP2 and NEO-PNO-LMP2 methods, showcasing their accuracy and efficiency through benchmark examples and addressing computational overhead for anharmonic corrections in localized X-H stretches.
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Studying dynamics of the dissociative adsorption and recombinative desorption of hydrogen on copper surfaces has shaped our atomic-scale understanding of surface chemistry, yet experimentally determining the thermal rates for these processes, which dictate the outcome of catalytic reactions, has been impossible so far. In this work, we determine the thermal rate constants for dissociative adsorption and recombinative desorption of hydrogen on Cu(111) between 200 and 1000 K using data from reaction dynamics experiments. Contrary to current understanding, our findings demonstrate the predominant role of quantum tunneling, even at temperatures as high as 400 K.

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Ultrasonic Control of Polymer-Capped Plasmonic Molecules.

ACS Nano

November 2024

Institut für Physikalische Chemie, Georg-August-Universität Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany.

Plasmonic molecules (PMs) composed of polymer-capped nanoparticles represent an emerging material class with precise optical functionalities. However, achieving controlled structural changes in metallic nanoparticle aggregation at the nanoscale, similar to the modification of atomic structures, remains challenging. This study demonstrates the 2D/3D isomerization of such plasmonic molecules induced by a controlled ultrasound process.

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Hydrogen bonds involving the oxygen atoms of intermediates that result from copper-mediated O activation play a key role for controlling the reactivity of Cu/O active sites in metalloenzymes and synthetic model complexes. However, structural insight into H-bonding in such transient species as well as thermodynamic information about proton transfer to or from the O-derived ligands is scarce. Here we present a detailed study of the reversible interconversion of a μ-peroxodicopper(II) complex ([1]) and its μ-hydroperoxo congener ([2]) via (de)protonation, including the isolation and structural characterization of several H-bond donor (HBD) adducts of [1] and the determination of binding constants.

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C=C Dissociative Imination of Styrenes by a Photogenerated Metallonitrene.

JACS Au

September 2024

Institut für Anorganische Chemie and International Center for Advanced Studies of Energy Conversion, Georg-August-Universität Göttingen, Tammannstraße 4, 37077 Göttingen, Germany.

Photolysis of a platinum(II) azide complex in the presence of styrenes enables C=C double bond cleavage upon dissociative olefin imination to aldimido (Pt-N=CHPh) and formimido (Pt-N=CH) complexes as the main products. Spectroscopic and quantum chemical examinations support a mechanism that commences with the decay of the metallonitrene photoproduct (Pt-N) via bimolecular coupling and nitrogen loss as N. The resulting platinum(I) complex initiates a radical chain mechanism via a dinuclear radical-bridged species (Pt-CHCHPhN-Pt) as a direct precursor to C-C scission.

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Pulsed EPR Methods in the Angstrom to Nanometre Scale Shed Light on the Conformational Flexibility of a Fluoride Riboswitch.

Angew Chem Int Ed Engl

December 2024

EaStCHEM School of Chemistry, Biomedical Sciences Research Complex and Centre of Magnetic Resonance, University of St Andrews, North Haugh, KY16 9ST, St Andrews, United Kingdom.

Riboswitches control gene regulation upon external stimuli such as environmental factors or ligand binding. The fluoride sensing riboswitch from Thermotoga petrophila is a complex regulatory RNA proposed to be involved in resistance to F cytotoxicity. The details of structure and dynamics underpinning the regulatory mechanism are currently debated.

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O-H bond stretching vibrations in hydrogen-bonded complexes embedded into cryogenic neon matrices are subtly downshifted from cold gas phase reference wavenumbers. To the extent that this shift is systematic, it enables neon matrices as more universally applicable spectroscopic benchmark environments for quantum chemical predictions. Outliers are indicative of either an assignment problem in one of the two cryogenic experiments or they reveal interesting dynamics or structural effects on the complexes as a function of the environment.

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Collective cell migration is an emergent phenomenon, with long-range cell-cell communication influenced by various factors, including transmission of forces, viscoelasticity of individual cells, substrate interactions, and mechanotransduction. We investigate how alterations in cell-substrate distance fluctuations, cell-substrate adhesion, and traction forces impact the average velocity and temporal-spatial correlation of confluent monolayers formed by either wild-type (WT) MDCKII cells or zonula occludens (ZO)-1/2-depleted MDCKII cells (double knockdown [dKD]) representing highly contractile cells. The data indicate that confluent dKD monolayers exhibit decreased average velocity compared to less contractile WT cells concomitant with increased substrate adhesion, reduced traction forces, a more compact shape, diminished cell-cell interactions, and reduced cell-substrate distance fluctuations.

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The Born-Oppenheimer approximation (BOA), which serves as the basis for our understanding of chemical bonding, reactivity and dynamics, is routinely violated for vibrationally inelastic scattering of molecules at metal surfaces. The title-field therefore represents a fascinating challenge to our conventional wisdom calling for new concepts that involve explicit electron dynamics occurring in concert with nuclear motion. Here, we review progress made in this field over the last decade, which has witnessed dramatic advances in experimental methods, thereby providing a much more extensive set of diverse observations than has ever before been available.

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APOST-3D: Chemical concepts from wavefunction analysis.

J Chem Phys

May 2024

Institut für Physikalische Chemie, Georg-August Universität Göttingen, Tammannstraße 6, 37077 Göttingen, Germany.

Open-source APOST-3D software features a large number of wavefunction analysis tools developed over the past 20 years, aiming at connecting classical chemical concepts with the electronic structure of molecules. APOST-3D relies on the identification of the atom in the molecule (AIM), and several analysis tools are implemented in the most general way so that they can be used in combination with any chosen AIM. Several Hilbert-space and real-space (fuzzy atom) AIM definitions are implemented.

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Integrated machine learning and multimodal data fusion for patho-phenotypic feature recognition in iPSC models of dilated cardiomyopathy.

Biol Chem

June 2024

Department of Cardiology and Pneumology, Heart Research Center, University Medical Center, 27177 Göttingen University, Robert-Koch-Strasse 40, D-37075 Göttingen, Germany.

Integration of multiple data sources presents a challenge for accurate prediction of molecular patho-phenotypic features in automated analysis of data from human model systems. Here, we applied a machine learning-based data integration to distinguish patho-phenotypic features at the subcellular level for dilated cardiomyopathy (DCM). We employed a human induced pluripotent stem cell-derived cardiomyocyte (iPSC-CM) model of a DCM mutation in the sarcomere protein troponin T (TnT), TnT-R141W, compared to isogenic healthy (WT) control iPSC-CMs.

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Optimization of Quantum Nuclei Positions with the Adaptive Nuclear-Electronic Orbital Approach.

J Phys Chem A

April 2024

Institute of Physical Chemistry, University of Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany.

The use of multicomponent methods has become increasingly popular over the last years. Under this framework, nuclei (commonly protons) are treated quantum mechanically on the same footing as the electronic structure problem. Under the use of atomic-centered orbitals, this can lead to some complications as the ideal location of the nuclear basis centers must be optimized.

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ConspectusWe have learned over the past years how London dispersion forces can be effectively used to influence or even qualitatively tip the structure of aggregates and the conformation of single molecules. This happens despite the fact that single dispersion contacts are much weaker than competing polar forces. It is a classical case of strength by numbers, with the importance of London dispersion forces scaling with the system size.

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Rhenium Alkyne Catalysis: Sterics Control the Reactivity.

Inorg Chem

April 2024

Institut de Química Computacional i Catàlisi, Departament de Química, Universitat de Girona, c/Ma Aurèlia Capmany 69, Girona 17003, Catalonia, Spain.

Metathesis reactions, including alkane, alkene, and alkyne metatheses, have their origins in the fundamental understanding of chemical reactions and the development of specialized catalysts. These reactions stand as transformative pillars in organic chemistry, providing efficient rearrangement of carbon-carbon bonds and enabling synthetic access to diverse and complex compounds. Their impact spans industries such as petrochemicals, pharmaceuticals, and materials science.

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The strength of the OH-bend/OH-stretch Fermi resonance in small water clusters.

Phys Chem Chem Phys

March 2024

Georg-August-Universität Göttingen, Institut für Physikalische Chemie, Tammannstraße 6, 37077 Göttingen, Germany.

A novel Raman jet-spectrometer is used to study the Fermi resonance between the OH bending overtone and OH stretching fundamental in small cyclic water clusters (HO) with = 3, 4, 5. The new setup features a recirculating vacuum system which reduces the gas consumption by 2 to 3 orders of magnitude and enables long-term measurements of very weak Raman signals. Raman spectra measured from highly diluted expansions with unprecedented signal-to-noise ratio are presented and cluster-specific intensity ratios and effective coupling constants are derived using Markov-Chain Monte-Carlo methods, yielding a high probability for an almost "perfect" resonance for the tetramer and pentamer, a close frequency match of bend overtone and stretch fundamental with intensity ratios close to 1, but a larger coupling constant for the trimer, with best estimates close to ≲ 50 cm < ≲ 60 cm < ≈ 65 cm.

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From the Automated Calculation of Potential Energy Surfaces to Accurate Infrared Spectra.

J Phys Chem Lett

March 2024

Institute for Theoretical Chemistry, University of Stuttgart, Pfaffenwaldring 55, Stuttgart 70569, Germany.

Advances in the development of quantum chemical methods and progress in multicore architectures in computer science made the simulation of infrared spectra of isolated molecules competitive with respect to established experimental methods. Although it is mainly the multidimensional potential energy surface that controls the accuracy of these calculations, the subsequent vibrational structure calculations need to be carefully converged in order to yield accurate results. As both aspects need to be considered in a balanced way, we focus on approaches for molecules of up to 12-15 atoms with respect to both parts, which have been automated to some extent so that they can be employed in routine applications.

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Constitutional and conformational isomers of bromopropanol are vibrationally and rotationally characterised with parallels drawn to the structural chlorine analogues. A previous microwave spectroscopic study of the chloropropanols is re-examined and all systems are explored by Raman jet spectroscopy. For bromine, the entire nuclear quadrupole coupling tensors are accurately determined and compared to their chlorine counterparts.

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Multiple redox switches of the SARS-CoV-2 main protease in vitro provide opportunities for drug design.

Nat Commun

January 2024

Department of Molecular Enzymology, Göttingen Center of Molecular Biosciences, Georg-August University Göttingen, Julia-Lermontowa-Weg 3, D-37077, Göttingen, Germany.

Article Synopsis
  • Antiviral drugs targeting SARS-CoV-2, particularly the main protease (M), are crucial for preventing future COVID outbreaks.
  • The study reveals that M undergoes redox regulation, switching between an active dimer and a dormant monomer, affecting its function through modifications of specific cysteine residues.
  • The findings also identify potential druggable sites in the form of conserved redox switches, which could be found in main proteases of other coronaviruses like MERS-CoV and SARS-CoV.
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Investigating atom-surface interactions is the key to an in-depth understanding of chemical processes at interfaces, which are of central importance in many fields - from heterogeneous catalysis to corrosion. In this work, we present a joint experimental and theoretical effort to gain insights into the atomistic details of hydrogen atom scattering at the α-AlO(0001) surface. Surprisingly, this system has been hardly studied to date, although hydrogen atoms as well as α-AlO are omnipresent in catalysis as reactive species and support oxide, respectively.

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Microhydration of Tertiary Amines: Robust Resonances in Red-Shifted Water.

J Phys Chem Lett

November 2023

Institute of Physical Chemistry, University of Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany.

Tertiary amines are strong hydrogen bond acceptors. When a water molecule donates one of the OH groups, its in-phase stretching vibration wavenumber is decreased to such an extent that it comes close to the water bending overtone. This gives rise to anharmonic phenomena such as classical Fermi resonance, resonance with multiple-quantum dark states, or combination transitions with low-frequency intermolecular modes.

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Nuclear Quantum Effects Made Accessible: Local Density Fitting in Multicomponent Methods.

J Chem Theory Comput

November 2023

Institute of Physical Chemistry, University of Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany.

The simulation of nuclear quantum effects (NQEs) is crucial for an accurate description of systems and processes involving light nuclei, such as hydrogen atoms. Within the last years, the importance of those effects has been highlighted for a vast range of systems with tremendous implications in chemistry, biology, physics, and materials sciences. However, while electronic structure theory methods have become routine tools for quantum chemical investigations, there is still a lack of approaches to address NQEs that are computationally accessible and straightforward to use.

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A new polymorph of white phosphorus at ambient conditions.

IUCrJ

November 2023

Institut für Anorganische Chemie, Georg-August-Universität Göttingen, Tammannstraße 4, Göttingen, 37077 Lower Saxony, Germany.

Phosphorus exists in several different allotropes: white, red, violet and black. For industrial and academic applications, white phosphorus is the most important. So far, three polymorphs of white phosphorus, all consisting of P tetrahedra, have been described.

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