31 results match your criteria: "Galvin Life Sciences Center[Affiliation]"

Low temperatures associated with winter can limit the survival of organisms, especially ectotherms whose body temperature is similar to their environment. However, there is a gap in understanding how overwintering may vary among groups of species that interact closely, such as multiple parasitoid species that attack the same host insect. Here, we investigate cold tolerance and diapause phenotypes in three endoparasitoid wasps of the apple maggot fly Rhagoletis pomonella (Diptera: Tephritidae): Utetes canaliculatus, Diachasma alloeum, and Diachasmimorpha mellea (Hymenoptera: Braconidae).

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Article Synopsis
  • FFPE tissues are useful for identifying biomarkers due to their availability, but their RNA quality can be poor; this study aimed to find which FFPE samples yield usable RNA for sequencing.
  • The researchers optimized RNA library preparation methods and tested them on various FFPE and fresh frozen samples, eventually developing a decision tree model to predict which samples would pass quality control based on input RNA metrics.
  • It was found that samples with lower RNA concentrations and fewer detectable genes were more likely to fail quality control, leading to a recommendation of at least 25 ng/µl RNA concentration for successful library preparation.
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Mechanisms of inbreeding avoidance in a wild primate.

Curr Biol

April 2022

Department of Biology, Duke University, Box 90338, Durham, NC 27708, USA; Department of Evolutionary Anthropology, Duke University, Box 90383, Durham, NC 27708, USA; Duke University Population Research Institute, Duke University, Box 90989, Durham, NC 27708, USA. Electronic address:

Inbreeding often imposes net fitness costs, leading to the expectation that animals will engage in inbreeding avoidance when the costs of doing so are not prohibitive. However, one recent meta-analysis indicates that animals of many species do not avoid mating with kin in experimental settings, and another reports that behavioral inbreeding avoidance generally evolves only when kin regularly encounter each other and inbreeding costs are high. These results raise questions about the processes that separate kin, how these processes depend on kin class and context, and whether kin classes differ in how effectively they avoid inbreeding via mate choice-in turn, demanding detailed demographic and behavioral data within individual populations.

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Measuring salivary cortisol in wild carnivores.

Horm Behav

January 2022

University of Michigan, Department of Psychology, 530 Church Street, Ann Arbor, MI 48109, USA; University of Michigan, Department of Anthropology, 1085 South University Avenue, Ann Arbor, MI 48109, USA.

Salivary hormone analyses provide a useful alternative to fecal and urinary hormone analyses in non-invasive studies of behavioral endocrinology. Here, we use saliva to assess cortisol levels in a wild population of spotted hyenas (Crocuta crocuta), a gregarious carnivore living in complex social groups. We first describe a novel, non-invasive method of collecting saliva from juvenile hyenas and validate a salivary cortisol assay for use in this species.

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A key to understanding life's great diversity is discerning how competing organisms divide limiting resources to coexist in diverse communities. While temporal resource partitioning has long been hypothesized to reduce the negative effects of interspecific competition, empirical evidence suggests that time may not often be an axis along which animal species routinely subdivide resources. Here, we present evidence to the contrary in the world's most biodiverse group of animals: insect parasites (parasitoids).

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Vector-borne diseases that occur in humans, as well as in domestic and wild reservoir hosts, cause a significant concern in public health, veterinary health, and ecological health in bio-diverse environments. The majority of vector-borne zoonotic diseases are transmitted among diverse host species, but different hosts have their own ability to transmit pathogens and to attract vectors. These combined transmission mechanisms in hosts and vectors are often called "host competencies" and "vector-feeding preferences.

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UQCRH downregulation promotes Warburg effect in renal cell carcinoma cells.

Sci Rep

September 2020

Department of Biological Sciences, Boler-Parseghian Center for Rare and Neglected Diseases, University of Notre Dame, 193 Galvin Life Sciences Center, Notre Dame, IN, 46556, USA.

Ubiquinol-cytochrome c reductase hinge protein (UQCRH) is the hinge protein for the multi-subunit complex III of the mitochondrial electron transport chain and is involved in the electron transfer reaction between cytochrome c1 and c. Recent genome-wide transcriptomic and epigenomic profiling of clear cell renal cell carcinoma (ccRCC) by The Cancer Genome Atlas (TCGA) identified UQCRH as the top-ranked gene showing inverse correlation between DNA hypermethylation and mRNA downregulation. The function and underlying mechanism of UQCRH in the Warburg effect metabolism of ccRCC have not been characterized.

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The global decline of amphibians is a major conservation issue. Many stressors are recognized for this decline including exposure to environmental contaminants. Mercury (Hg) is an environmental contaminant that bioaccumulates in wildlife and can cause a variety of negative impacts across taxa, including amphibians.

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Machine learning techniques for mass spectrometry imaging data analysis and applications.

Bioanalysis

April 2018

Department of Chemistry & Biochemistry & the Harper Cancer Research Institute, University of Notre Dame, 140 McCourtney Hall, Notre Dame, IN 46556, USA.

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Social status is an important predictor of parasite risk in vertebrates. To date, general frameworks to explain status-related variation in parasitism have remained elusive. In this meta-analysis, we evaluated five hypotheses proposed to explain status-related variation in parasitism in male and female vertebrates by leveraging variation in hierarchy type, mating system, parasite transmission mode, and allostatic load to test associated predictions.

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Understanding demographic trends and patterns of gene flow in an endangered species is crucial for devising conservation strategies. Here, we examined the extent of population structure and recent evolution of the critically endangered Yangtze finless porpoise (Neophocaena asiaeorientalis asiaeorientalis). By analysing genetic variation at the mitochondrial and nuclear microsatellite loci for 148 individuals, we identified three populations along the Yangtze River, each one connected to a group of admixed ancestry.

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Quercus rubra has been introduced in Europe since the end of the 17th century. It is widely distributed today across this continent and considered invasive in some countries. Here, we investigated the distribution of genetic diversity of both native and introduced populations with the aim of tracing the origin of introduced populations.

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The molecular mechanisms and genetic architecture that facilitate adaptive radiation of lineages remain elusive. Polymorphic chromosomal inversions, due to their recombination-reducing effect, are proposed instruments of ecotypic differentiation. Here, we study an ecologically diversifying lineage of Anopheles gambiae, known as the Bamako chromosomal form based on its unique complement of three chromosomal inversions, to explore the impact of these inversions on ecotypic differentiation.

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Streptococcus pyogenes, or group A Streptococcus (GAS), is a human bacterial pathogen that can manifest as a range of diseases from pharyngitis and impetigo to severe outcomes such as necrotizing fasciitis and toxic shock syndrome. GAS disease remains a global health burden with cases estimated at over 700 million annually and over half a million deaths due to severe infections(1). For over 100 years, a clinical hallmark of diagnosis has been the appearance of complete (beta) haemolysis when grown in the presence of blood.

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Herbivores can be major drivers of environmental change, altering plant community structure and changing biodiversity through the amount and species of plants consumed. If natural predators can reduce herbivore numbers and/or alter herbivore foraging behavior, then predators may reduce herbivory on sensitive plants, and a trophic cascade will emerge. We have investigated whether gray wolves (Canis lupus) generate such trophic cascades by reducing white-tailed deer (Odocoileus virginianus) herbivory on saplings and rare forbs in a northern mesic forest (Land O' Lakes, WI).

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We study the ice-binding site (IBS) of a hyperactive antifreeze protein from the beetle Dendroides canadensis (DAFP-1) using vibrational sum-frequency generation spectroscopy. We find that DAFP-1 accumulates at the air-water interface due to the hydrophobic character of its threonine-rich IBS while retaining its highly regular β-helical fold. We observe a narrow band at 3485 cm(-1) that we assign to the O-H stretch vibration of threonine hydroxyl groups of the IBS.

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Chemical ecology and olfaction in arthropod vectors of diseases.

Curr Opin Insect Sci

August 2015

Department of Biological Sciences and Eck Institute for Global Health, Galvin Life Sciences Center, University of Notre Dame, IN 46556, USA. Electronic address:

Hematophagous arthropods (ticks and insects, collectively hereafter referred to as vectors) transmit various life threatening diseases resulting in over one million human deaths annually. Exploiting vertebrates for blood demanded extensive sensory and behavioral adaptations that are apparent across the evolutionary range of vector species, from primitive ticks to advanced dipterans. Since animal senses are biological features that have been shaped by natural selection to promote adaptive behavior, a variety of exciting patterns are apparent in what they sense and how.

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The field evaluation of a push-pull system to control malaria vectors in northern Belize, Central America.

Malar J

April 2015

College of Biological Sciences, Eck Institute for Global Health, University of Notre Dame, Galvin Life Sciences Center, Notre Dame, IN, 46556, USA.

Background: Campaigns for the continued reduction and eventual elimination of malaria may benefit from new and innovative vector control tools. One novel approach being considered uses a push-pull strategy, whereby spatial repellents are used in combination with outdoor baited traps. The desired effect is the behavioural manipulation of mosquito populations to elicit movement of vectors away from people and into traps.

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Social status, immune response and parasitism in males: a meta-analysis.

Philos Trans R Soc Lond B Biol Sci

May 2015

Department of Biological Sciences, University of Notre Dame, 100 Galvin Life Sciences Center, Notre Dame, IN 46556, USA.

In male vertebrates, two conflicting paradigms--the energetic costs of high dominance rank and the chronic stress of low rank--have been proposed to explain patterns of immune function and parasitism. To date, neither paradigm has provided a complete explanation for status-related differences in male health. Here, we applied meta-analyses to test for correlations between male social status, immune responses and parasitism.

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Host race formation, the establishment of new populations using novel resources, is a major hypothesized mechanism of ecological speciation, especially in plant-feeding insects. The initial stages of host race formation will often involve phenotypic plasticity on the novel resource, with subsequent genetically based adaptations enhancing host-associated fitness differences. Several studies have explored the physiology of the plastic responses of insects to novel host environments.

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Numerous obesity studies have coupled murine models with non-invasive methods to quantify body composition in longitudinal experiments, including X-ray computed tomography (CT) or quantitative nuclear magnetic resonance (QMR). Both microCT and QMR have been separately validated with invasive techniques of adipose tissue quantification, like post-mortem fat extraction and measurement. Here we report a head-to-head study of both protocols using oil phantoms and mouse populations to determine the parameters that best align CT data with that from QMR.

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Current research targeting filtered macrobial environmental DNA (eDNA) often relies upon cold ambient temperatures at various stages, including the transport of water samples from the field to the laboratory and the storage of water and/or filtered samples in the laboratory. This poses practical limitations for field collections in locations where refrigeration and frozen storage is difficult or where samples must be transported long distances for further processing and screening. This study demonstrates the successful preservation of eDNA at room temperature (20 °C) in two lysis buffers, CTAB and Longmire's, over a 2-week period of time.

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The CRTC1-SIK1 pathway regulates entrainment of the circadian clock.

Cell

August 2013

Nuffield Department of Clinical Neurosciences (Nuffield Laboratory of Ophthalmology), University of Oxford, Levels 5-6 West Wing, John Radcliffe Hospital, Headley Way, Oxford OX3 9DU, UK. Electronic address:

Retinal photoreceptors entrain the circadian system to the solar day. This photic resetting involves cAMP response element binding protein (CREB)-mediated upregulation of Per genes within individual cells of the suprachiasmatic nuclei (SCN). Our detailed understanding of this pathway is poor, and it remains unclear why entrainment to a new time zone takes several days.

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X-ray Computed Tomography (CT) is one of the most commonly utilized anatomical imaging modalities for both research and clinical purposes. CT combines high-resolution, three-dimensional data with relatively fast acquisition to provide a solid platform for non-invasive human or specimen imaging. The primary limitation of CT is its inability to distinguish many soft tissues based on native contrast.

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Multimodal optical, X-ray CT, and SPECT imaging of a mouse model of breast cancer lung metastasis.

Curr Mol Med

March 2013

Department of Biological Sciences, 100 Galvin Life Sciences Center, University of Notre Dame, Notre Dame, IN 46556, USA.

Tumor heterogeneity is recognized as a major issue within clinical oncology, and the concept of personalized molecular medicine is emerging as a means to mitigate this problem. Given the vast number of cancer types and subtypes, robust pre-clinical models of cancer must be studied to interrogate the molecular mechanisms involved in each scenario. In particular, mouse models of tumor metastasis are of critical importance for pre-clinical cancer research at the cancer cell molecular level.

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