The Role of the S40 Gene Family in Leaf Senescence.

Senescence affect different traits of plants, such as the ripening of fruit, number, quality and timing of seed maturation. While senescence is induced by age, growth hormones and different environmental stresses, a highly organized genetic mechanism related to substantial changes in gene expression regulates the process. Only a few genes associated to senescence have been identified in crop plants despite the vital significance of senescence for crop yield.

Assessing transhumance corridors on high mountain environments by least cost path analysis: the case of yak herds in Gilgit-Baltistan, Pakistan.

Mountain environments in the world host highly specialized flora and fauna which are vulnerable because of land use and climate change. Transhumance and other land use traditional practices are present in most of the mountains of the world, and management tools able to cope with new socioeconomic settings and environmental changes are urgently needed. During past centuries, yak (Bos grunniens) herding in Northern Pakistan involved the migration of herds to high mountain international rangelands, but the recent establishment of international borders breaks the traditional transhumance paths, promoting several ecological problems.

Microbial volatile compounds alter the soil microbial community.

Volatile organic compounds (VOCs) from soil bacteria are likely to have an important role in the interactions among soil microorganisms. However, their effects on the soil microbial community have not been extensively studied. In this study, the effect of bacterial VOCs generated by growing Bacillus amyloliquefaciens NJN-6 on modified MS medium on soil microbial community was evaluated.

Bacterial Survival in .

We performed an assay to test the ability of different strains to survive inside amoebal cells after ingestion. In the assay we incubated bacteria together with cells of for six hours. After co-incubation most of the uningested bacteria were removed by centrifugation and the remaining uningested bacteria were killed by gentamicin.

Genomic Characterization of Travel-Associated Dengue Viruses Isolated from the Entry-Exit Ports in Fujian Province, China, 2013-2015.

Over the past decade, indigenous dengue outbreaks have occurred occasionally in Fujian province in southeastern China because of sporadic imported dengue viruses (DENV). In this study, 3 DENV-2 and 2 DENV-4 strains were isolated from suspected febrile travelers at 2 ports of entry in Fujian between 2013-2015. Complete viral genome sequences of these new isolates were obtained with Sanger chemistry.

Land scale biogeography of arsenic biotransformation genes in estuarine wetland.

As an analogue of phosphorus, arsenic (As) has a biogeochemical cycle coupled closely with other key elements on the Earth, such as iron, sulfate and phosphate. It has been documented that microbial genes associated with As biotransformation are widely present in As-rich environments. Nonetheless, their presence in natural environment with low As levels remains unclear.

Metal homeostasis and resistance in bacteria.

Metal ions are essential for many reactions, but excess metals can be toxic. In bacteria, metal limitation activates pathways that are involved in the import and mobilization of metals, whereas excess metals induce efflux and storage. In this Review, we highlight recent insights into metal homeostasis, including protein-based and RNA-based sensors that interact directly with metals or metal-containing cofactors.

A new species and three newly recorded species of the dacnusine genus Haliday (Hymenoptera: Braconidae: Alysiinae) from China.

A new species of the genus Dacnusa from the Palaearctic region of China, Dacnusa (Pachysema) heterodentatus sp. nov. is described.

Metabolic Profiling and Identification of Shikonins in Root Periderm of Two Invasive Echium spp. Weeds in Australia.

Metabolic profiling can be successfully implemented to analyse a living system's response to environmental conditions by providing critical information on an organism's physiological state at a particular point in time and allowing for both quantitative and qualitative assessment of a specific subset(s) of key metabolites. Shikonins are highly reactive chemicals that affect various cell signalling pathways and possess antifungal, antibacterial and allelopathic activity. Based on previous bioassay results, bioactive shikonins, are likely to play important roles in the regulation of rhizosphere interactions with neighbouring plants, microbes and herbivores.

Ecology and genetics affect relative invasion success of two Echium species in southern Australia.

Echium plantagineum and E. vulgare are congeneric exotics first introduced to Australia in the early 1800 s. There, E.

Recent amplification of Osr4 LTR-retrotransposon caused rice gene mutation and dwarf phenotype.

A novel rice mutant was identified using map-based cloning and comparative analysis of known mutants. The mutant () shows a mild dwarf trait, which differs only slightly from the wildtype in plant height at the tillering stage. The mutant is different from other mutants.

CuMnOS Nanoflowers with Different Cu/Cu Ratios for the CO-to-CHOH and the CHOH-to-H Redox Reactions.

A conservative CO-Methanol (CHOH) regeneration cycle, to capture and reutilize the greenhouse gas of CO by aqueous hydrogenation for industry-useful CHOH and to convert aqueous CHOH solution by dehydrogenation for the clean energy of hydrogen (H), is demonstrated at normal temperature and pressure (NTP) with two kinds of CuMnOS nanoflower catalysts. The [Cu]-high CuMnOS led to a CHOH yield of 21.1 mmol·gcatal.

Investigation of the crosstalk between the flg22 and the UV-B-induced flavonol pathway in Arabidopsis thaliana seedlings.

In Arabidopsis cell culture, we have shown that flavonol metabolite accumulation depends on expression of the flavonol pathway genes (FPGs), which are up-regulated by UV-B irradiation but repressed during microbe-associated molecular pattern (MAMP) -triggered immunity (MTI) induced by the bacterial elicitor flg22. The suppression of flavonoid production during MTI is believed to allow the plant focusing its metabolism on the pathogen defense by directing phenylalanine resources from UV-B protective flavonol production towards production of phytoalexins and cell wall fortification by lignin incorporation. Here, we show that UV-B-induced FPGs are also suppressed by flg22 in Arabidopsis seedlings, demonstrating that this kind of 'crosstalk' is fully functional in planta.

Pests, diseases and crop protection practices in the smallholder sweetpotato production system of the highlands of Papua New Guinea.

Sweetpotato () is a food crop of global significance. The storage roots and foliage of crop are attacked by a wide range of pests and diseases. Whilst these are generally well controlled in developed countries using approaches such as clean planting material and monitoring with pheromone traps to guide insecticide use, research into methods suitable for developing countries has lagged.

Expanding and exploring the diversity of phytoplasmas from lucerne (Medicago sativa).

Phytoplasmas are a group of insect-vectored bacteria responsible for disease in many plant species worldwide. Among the crop species affected is the economically valuable forage species lucerne. Here we provide comprehensive molecular evidence for infection in multiple lucerne plants by a phytoplasma not previously known from this plant species.

Homeobox Is Pivotal for OsWUS Controlling Tiller Development and Female Fertility in Rice.

OsWUS has recently been shown to be a transcription factor gene critical for tiller development and fertility in rice. The OsWUS protein consists of three conserved structural domains, but their biological functions are still unclear. We discovered a new rice mutant resulting from tissue culture, which hardly produced tillers and exhibited complete female sterility.

Identification and localization of bioactive naphthoquinones in the roots and rhizosphere of Paterson's curse (Echium plantagineum), a noxious invader.

Bioactive plant secondary products are frequently the drivers of complex rhizosphere interactions, including those with other plants, herbivores and microbiota. These chemically diverse molecules typically accumulate in a highly regulated manner in specialized plant tissues and organelles. We studied the production and localization of bioactive naphthoquinones (NQs) in the roots of Echium plantagineum, an invasive endemic weed in Australia.

Comprehensive Mitochondrial Metabolic Shift during the Critical Node of Seed Ageing in Rice.

The critical node (CN) in seed aging in rice (Oryza sativa) is the transformation from Phase I (P-I) to Phase II (P-II) of the reverse S-shaped curve (RS-SC). Although mitochondrial dysfunction plays a key role in seed ageing, the metabolic shift in the CN remains poorly understood. Here, we investigated the mitochondrial regulatory mechanisms during the CN of rice seed ageing.

Conserved and unique features of the homeologous maize Aux/IAA proteins ROOTLESS WITH UNDETECTABLE MERISTEM 1 and RUM1-like 1.

The maize (Zea mays L.) Aux/IAA protein RUM1 (ROOTLESS WITH UNDETECTABLE MERISTEM 1) is a key regulator of lateral and seminal root formation. An ancient maize genome duplication resulted in the emergence of its homeolog rum1-like1 (rul1), which displays 92% amino acid sequence identity with RUM1.

Metabolic Profiling of Pyrrolizidine Alkaloids in Foliage of Two Echium spp. Invaders in Australia--A Case of Novel Weapons?

Metabolic profiling allows for simultaneous and rapid annotation of biochemically similar organismal metabolites. An effective platform for profiling of toxic pyrrolizidine alkaloids (PAs) and their N-oxides (PANOs) was developed using ultra high pressure liquid chromatography quadrupole time-of-flight (UHPLC-QTOF) mass spectrometry. Field-collected populations of invasive Australian weeds, Echium plantagineum and E.

Four new species of Tanycarpa (Hymenoptera, Braconidae, Alysiinae) from the Palaearctic Region and new records of species from China.

Four new species of Tanycarpa (Hymenoptera, Braconidae, Alysiinae), T. gymnonotum Yao sp. n.

Determination of Rab5 activity in the cell by effector pull-down assay.

Rab5 targets to early endosomes and is a master regulator of early endosome fusion and endocytosis in all eukaryotic cells. Like other GTPases, Rab5 functions as a molecular switch by alternating between GTP-bound and GDP-bound forms, with the former being biologically active via interactions with multiple effector proteins. Thus the Rab5-GTP level in the cell reflects Rab5 activity in promoting endosome fusion and endocytosis and is indicative of cellular endocytic activity.

A new species in the newly recorded genus Trachyusa (Hymenoptera: Braconidae: Alysiinae) from China.

Trachyusa whartoni Yao sp. nov. from Dalian, Liaoning, China is described and illustrated.

Whole-genome analysis revealed the positively selected genes during the differentiation of indica and temperate japonica rice.

To investigate the selective pressures acting on the protein-coding genes during the differentiation of indica and japonica, all of the possible orthologous genes between the Nipponbare and 93-11 genomes were identified and compared with each other. Among these genes, 8,530 pairs had identical sequences, and 27,384 pairs shared more than 90% sequence identity. Only 2,678 pairs of genes displaying a Ka/Ks ratio significantly greater than one were revealed, and most of these genes contained only nonsynonymous sites.