14 results match your criteria: "France University of Lille[Affiliation]"

Deciphering the ghost proteome in ovarian cancer cells by deep proteogenomic characterization.

Cell Death Dis

September 2024

Univ. Lille, Inserm, CHU Lille, U1192, Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, F-59000, Lille, France.

Article Synopsis
  • Proteogenomics integrates genomics and mass spectrometry to uncover both standard and alternative proteins, enhancing personalized medicine for conditions like ovarian cancer.
  • Through RNA-sequencing and protein database generation, researchers identified 128 reference proteins and 30 alternative proteins unique to ovarian cancer cell lines, uncovering a specific mutation in an alternative protein.
  • Advanced techniques like cross-linking mass spectrometry revealed interactions between alternative and reference proteins, suggesting that some alternative proteins may play crucial roles in important cellular processes such as DNA replication and repair.
View Article and Find Full Text PDF

Employing non-targeted interactomics approach and subcellular fractionation to increase our understanding of the ghost proteome.

iScience

February 2023

Université de Lille, University Lille, CHU Lille, Inserm U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, 59000 Lille, France.

Article Synopsis
  • Eukaryotic mRNA, long thought to only code for one protein (monocistronic), is being challenged by the discovery of alternative proteins (AltProts), suggesting a more complex "ghost proteome."
  • Researchers utilized subcellular fractionation techniques to better identify these AltProts and their protein-protein interactions, uncovering 112 unique AltProts and 220 crosslinks, including interactions between AltProts and well-known Reference Proteins (RefProts).
  • Specific interactions highlighted in the study included IP_2292176 (AltFAM227B) with HLA-B, indicating a potential new immunopeptide, and interactions between HIST1H4F and various AltProts, suggesting their role in
View Article and Find Full Text PDF

Background: Sedation/analgesia is a daily challenge faced by intensivists managing patients with brain injury (BI) in intensive care units (ICUs). The optimization of sedation in patients with BI presents particular challenges. A choice must be made between the potential benefit of a rapid clinical evaluation and the potential exacerbation of intracranial hypertension in patients with impaired cerebral compliance.

View Article and Find Full Text PDF

Background: Extreme leukocytosis is known to induce remarkable variations of some clinical chemistry tests, thus leading to possible clinical misinterpretation. This study aimed to define whether also moderate leukocytosis may influence the stability of glucose and blood gases.

Methods: Blood samples are sent to the local laboratory through a pneumatic tube system.

View Article and Find Full Text PDF

Background: Although the 6-min walk test (6MWT) is the gold standard for assessing exercise-induced impairment of gas exchange, it cannot easily be performed in a clinical office environment. The aim of this study was to compare the 1-min sit-to-stand test (1STST) with the 6MWT for the ability to assess exercise-induced oxygen desaturation in patients with interstitial lung diseases (ILDs).

Methods: A total of 107 patients were enrolled and classified into three groups: sarcoidosis, fibrotic idiopathic interstitial pneumonia (f-IIP), and other forms of ILD.

View Article and Find Full Text PDF

Time for Targeted Therapies in Acute Respiratory Distress Syndrome? Understanding Every Single Piece of the Puzzle.

Crit Care Med

May 2018

University of Lille;, CNRS, UMR 8204;, INSERM, U1019; and CHU Lille, Pôle de Réanimation, Hôpital Roger Salengro, Lille, France University of Lille;, CHU Lille, Pôle de Réanimation, Hôpital Roger Salengro;, U995-LIRIC-Lille Inflammation Research International Center, University of Lille; and U995, INSERM, Lille, France University of Lille;, CNRS, UMR 8204;, INSERM, U1019; and CHU Lille, Pôle de Réanimation, Hôpital Roger Salengro, Lille, France.

View Article and Find Full Text PDF

Magnetic resonance imaging changes following natalizumab discontinuation in multiple sclerosis patients with progressive multifocal leukoencephalopathy.

Mult Scler

December 2018

University of Lille, CHU Lille, INSERM U1171 - Degenerative and Vascular Cognitive Disorders, F-59045 Lille, France/Department of Neuroradiology, University of Lille, CHU Lille, F-59000, Lille, France.

Background: Detecting early progressive multifocal leukoencephalopathy-immune reconstitution inflammatory syndrome (PML-IRIS) is clinically relevant.

Objective: Evaluating magnetic resonance imaging (MRI) changes following natalizumab (NTZ) discontinuation and preceding PML-IRIS.

Methods: MRIs (including diffusion-weighted imaging (DWI), T2-weighted fluid-attenuated inversion recovery (T2-FLAIR), post-contrast T1-weighted sequences) were performed every week following PML diagnosis in 11 consecutive NTZ-PML patients.

View Article and Find Full Text PDF

Statistical Tools for Propensity Score Matching.

Ann Surg

June 2017

Department of Biostatistics EA 2694, University Hospital of Lille, Lille, France University of Lille---Nord de France, Lille, France SIRIC ONCOLille, Rue Polonovski, Lille Cedex, France Department of Biostatistics EA 2694, University Hospital of Lille, Lille, France University of Lille---Nord de France, Lille, France Department of Digestive and Oncological Surgery, University Hospital of Lille, Lille, France University of Lille---Nord de France, Lille, France Department of Digestive and Oncological Surgery, University Hospital of Lille, Lille, France SIRIC ONCOLille, Rue Polonovski Lille Cedex, France.

View Article and Find Full Text PDF

The impact of short periods of match congestion on injury risk and patterns in an elite football club.

Br J Sports Med

June 2016

Department of Research and Development, LOSC Lille Métropole Football Club, Camphin-en-Pévèle, France University of Lille Nord de France, UDSL, Ronchin, France.

Background: The effect of fixture congestion on injury rates and patterns has received scarce attention in elite football and existing investigations have not accounted for player rotation or examined the temporal distribution and potential cause of injuries.

Aim: To prospectively investigate the epidemiology of injury during short periods of fixture congestion in a professional football club.

Methods: Over a six-season period, exposure time and injury data were compared in the same players (n=25 (14 individuals)) when participating in two frequently occurring short congested fixture cycles in comparison to match-play outside these cycles.

View Article and Find Full Text PDF

Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing.

Nucleic Acids Res

January 2016

University of Lille, CRIStAL, UMR CNRS 9189, cité scientifique-bat M3ext, 59650 Villeneuve d'Ascq, France Inria Lille Nord Europe, Bonsai team, Parc scientifique de la Haute Borne, 40, avenue Halley-Bt A, 59650 Villeneuve d'Ascq, France University of Lille, bilille, cité scientifique-bat M3ext, 59650 Villeneuve d'Ascq, France

Since its creation in 2006, Norine remains the unique knowledgebase dedicated to non-ribosomal peptides (NRPs). These secondary metabolites, produced by bacteria and fungi, harbor diverse interesting biological activities (such as antibiotic, antitumor, siderophore or surfactant) directly related to the diversity of their structures. The Norine team goal is to collect the NRPs and provide tools to analyze them efficiently.

View Article and Find Full Text PDF

Synergistic Effect of SN-38 in Combination with Cetuximab on Angiogenesis and Cancer Cell Invasion.

Anticancer Res

November 2015

Oscar Lambret Centre, Lille, France French National Institute of Health and Medical Research (INSERM U.837), Institute for Cancer Research of Lille, Lille, France Hospital Group of Lille Catholic Institute, Lille Catholic University, Lille, France.

Background: The combination of irinotecan, a topoisomerase I inhibitor with cetuximab, an antibody against epidermal growth factor receptor, produces synergistic and beneficial effects in patients with irinotecan-refractory colorectal cancer. Our hypothesis was that synergistic effects could be due to anti-angiogenesis and anti-invasion, but not to cytotoxicity.

Materials And Methods: Cytotoxicity was assessed by viability test and flow cytometry.

View Article and Find Full Text PDF

Aims: Previous studies have reported that decreased serine 208 phosphorylation of troponin T (TnTpSer208) is associated with ischaemic heart failure (HF), but the molecular mechanisms and functional consequences of these changes are unknown. The aim of this study was to characterize the balance between serine phosphorylation and O-N-acetylglucosaminylation (O-GlcNAcylation) of TnT in HF, its mechanisms, and the consequences of modulating these post-translational modifications.

Methods And Results: Decreased TnTpSer208 levels in the left ventricles of HF male Wistar rats were associated with reduced expression of PKCε but not of other cardiac PKC isoforms.

View Article and Find Full Text PDF

We report the first case of postneurosurgical meningitis due to Psychrobacter sanguinis, identified only by 16S rRNA analysis. Psychrobacter spp. usually live in deep sea environments and cold habitats.

View Article and Find Full Text PDF

Exercise performance is regulated during repeated sprints to limit the development of peripheral fatigue beyond a critical threshold.

Exp Physiol

July 2014

University of Nice Sophia Antipolis, Toulon, LAMHESS, EA 6309, F-06205, Nice, France University of Lille Nord de France, F-59000, Lille, France; UDSL, EA 4488, F-59790, Ronchin, France

We hypothesized that exercise performance is adjusted during repeated sprints in order not to surpass a critical threshold of peripheral fatigue. Twelve men randomly performed three experimental sessions on different days, i.e.

View Article and Find Full Text PDF