Effects of light regimes on circadian gene co-expression networks in .

Light/dark (LD) cycles are responsible for oscillations in gene expression, which modulate several aspects of plant physiology. Those oscillations can persist under constant conditions due to regulation by the circadian oscillator. The response of the transcriptome to light regimes is dynamic and allows plants to adapt rapidly to changing environmental conditions.

Utility of decision tools for assessing plant health risks from management strategies in natural environments.

Increased imports of plants and timber through global trade networks provide frequent opportunities for the introduction of novel plant pathogens that can cross-over from commercial to natural environments, threatening native species and ecosystem functioning. Prevention or management of such outbreaks relies on a diversity of cross-sectoral stakeholders acting along the invasion pathway. Yet, guidelines are often only produced for a small number of stakeholders, missing opportunities to consider ways to control outbreaks in other parts of the pathway.

Expanding growers' choice of plant disease management options can promote suboptimal social outcomes.

Previous models of growers' decision-making during epidemics have unrealistically limited disease management choices to just two options. Here, we expand previous game-theoretic models of grower decision-making to include three control options: a crop that is tolerant, resistant or susceptible to disease. Using tomato yellow leaf curl virus (TYLCV) as a case study, we investigate how growers can be incentivized to use different control options to achieve socially optimal outcomes.

Non-destructive, whole-plant phenotyping reveals dynamic changes in water use efficiency, photosynthesis, and rhizosphere acidification of sorghum accessions under osmotic stress.

Noninvasive phenotyping can quantify dynamic plant growth processes at higher temporal resolution than destructive phenotyping and can reveal phenomena that would be missed by end-point analysis alone. Additionally, whole-plant phenotyping can identify growth conditions that are optimal for both above- and below-ground tissues. However, noninvasive, whole-plant phenotyping approaches available today are generally expensive, complex, and non-modular.

Strawberry varieties differ in pollinator-relevant floral traits.

A rising global population will need more food, increasing demand for insect pollination services. However, general insect declines conflict with this demand. One way to mitigate this conflict is to grow crop flowers that are easier for insects to find and more rewarding to those that visit them.

Bumblebee responses to variation in pollinator-attracting traits of flowers.

Adaptations that attract pollinators to flowers are central to the reproductive success of insect-pollinated plants, including crops. Understanding the influence of these non-rewarding traits on pollinator preference is important for our future food security by maintaining sufficient crop pollination. We have identified substantial variation in flower shape, petal size, corolla-tube length, petal spot size and floral volatile compounds among a panel of 30 genetically distinct lines of .

Implications for conservation assessment from flux in the botanical record over 20 years in southwest Ghana.

At best, conservation decisions can only be made using the data available at the time. For plants and especially in the tropics, natural history collections remain the best available baseline information upon which to base conservation assessments, in spite of well-documented limitations in their taxonomic, geographic, and temporal coverage. We explore the extent to which changes to the plant biological record over 20 years have changed our conception of the conservation importance of 931 plant taxa, and 114 vegetation samples, recorded in forest reserves of the southwest Ghana biodiversity hotspot.

Fresh perspectives on an established technique: Pulsed amplitude modulation chlorophyll fluorescence.

Pulsed amplitude modulation (PAM) chlorophyll fluorescence provides information about photosynthetic energy transduction. When reliably measured, chlorophyll fluorescence provides detailed information about critical in vivo photosynthetic processes. Such information has recently provided novel and critical insights into how the yield potential of crops can be improved and it is being used to understand remotely sensed fluorescence, which is termed solar-induced fluorescence and will be solely measured by a satellite scheduled to be launched this year.

Distinct C sub-types and C bundle sheath isolation in the Paniceae grasses.

In C plants, the enzymatic machinery underpinning photosynthesis can vary, with, for example, three distinct C acid decarboxylases being used to release CO in the vicinity of RuBisCO. For decades, these decarboxylases have been used to classify C species into three biochemical sub-types. However, more recently, the notion that C species mix and match C acid decarboxylases has increased in popularity, and as a consequence, the validity of specific biochemical sub-types has been questioned.

Visualising an invisible symbiosis.

Unlabelled: Despite the vast abundance and global importance of plant and microbial species, the large majority go unnoticed and unappreciated by humans, contributing to pressing issues including the neglect of study and research of these organisms, the lack of interest and support for their protection and conservation, low microbial and botanical literacy in society, and a growing disconnect between people and nature. The invisibility of many of these organisms is a key factor in their oversight by society, but also points to a solution: sharing the wealth of visual data produced during scientific research with a broader audience. Here, we discuss how the invisible can be visualised for a public audience, and the benefits it can bring.

The effect of dilution on eco-evolutionary dynamics of experimental microbial communities.

Changing environmental conditions can infer structural modifications of predator-prey communities. New conditions often increase mortality which reduces population sizes. Following this, predation pressure may decrease until populations are dense again.

Integrating demography and distribution modeling for the iconic Colm. in the Romanian Carpathians.

Both climate change and human exploitation are major threats to plant life in mountain environments. One species that may be particularly sensitive to both of these stressors is the iconic alpine flower edelweiss (m Colm.).

A phylogenetic analysis of the wild species (Liliaceae) of Kosovo based on plastid and nuclear DNA sequence.

In Kosovo, the genus is represented by eight taxa, most of which form a species complex surrounding . To investigate the phylogenetic relationship of these species a Bayesian analysis was undertaken using the ITS nuclear marker and , and plastid markers. The resulting phylogenetic trees show that Kosovarian species consistently group into two main clades, the subgenera and .

Population modelling and genetics of a critically endangered Madagascan palm .

Madagascar is home to 208 indigenous palm species, almost all of them endemic and >80% of which are endangered. We undertook complete population census and sampling for genetic analysis of a relatively recently discovered giant fan palm, the Critically Endangered in 2008 and 2016. Our 2016 study included newly discovered populations and added to our genetic study.

Fluorescent reporters for functional analysis in rice leaves.

Fluorescent reporters have facilitated non-invasive imaging in multiple plant species and thus allowed the analysis of processes ranging from gene expression and protein localization to cellular patterning. However, in rice, a globally important crop and model species, there are relatively few reports of fluorescent proteins being used in leaves. Fluorescence imaging is particularly difficult in the rice leaf blade, likely due to a high degree of light scattering in this tissue.

Seasonal drivers of understorey temperature buffering in temperate deciduous forests across Europe.

Aim: Forest understorey microclimates are often buffered against extreme heat or cold, with important implications for the organisms living in these environments. We quantified seasonal effects of understorey microclimate predictors describing canopy structure, canopy composition and topography (i.e.

How do trees respond to species mixing in experimental compared to observational studies?

For decades, ecologists have investigated the effects of tree species diversity on tree productivity at different scales and with different approaches ranging from observational to experimental study designs. Using data from five European national forest inventories (16,773 plots), six tree species diversity experiments (584 plots), and six networks of comparative plots (169 plots), we tested whether tree species growth responses to species mixing are consistent and therefore transferrable between those different research approaches. Our results confirm the general positive effect of tree species mixing on species growth (16% on average) but we found no consistency in species-specific responses to mixing between any of the three approaches, even after restricting comparisons to only those plots that shared similar mixtures compositions and forest types.

An optimized protocol for isolation of high-quality RNA through laser capture microdissection of leaf material.

Laser Capture Microdissection is a powerful tool that allows thin slices of specific cell types to be separated from one another. However, the most commonly used protocol, which involves embedding tissue in paraffin wax, results in severely degraded RNA. Yields from low abundance cell types of leaves are particularly compromised.

Estimating below-canopy light regimes using airborne laser scanning: An application to plant community analysis.

Light is a key driver of forest biodiversity and functioning. Light regimes beneath tree canopies are mainly driven by the solar angle, topography, and vegetation structure, whose three-dimensional complexity creates heterogeneous light conditions that are challenging to quantify, especially across large areas. Remotely sensed canopy structure data from airborne laser scanning (ALS) provide outstanding opportunities for advancement in this respect.

An analysis of the energetic reward offered by field bean () flowers: Nectar, pollen, and operative force.

Global consumption of crops with a yield that is dependent on animal pollinators is growing, with greater areas planted each year. However, the floral traits that influence pollinator visitation are not usually the focus of breeding programmes, and therefore, it is likely that yield improvements may be made by optimizing floral traits to enhance pollinator visitation rates. We investigated the variation present in the floral reward of the bee-pollinated crop (field bean).