995 results match your criteria: "Department of Clinical Genomics[Affiliation]"

Article Synopsis
  • Philadelphia chromosome (Ph)-like acute lymphoblastic leukemia (ALL) has a high treatment failure rate and is characterized by gene fusions, particularly involving the PDGFRB gene.
  • Researchers identified a new PDGFRB fusion gene, NRIP1::PDGFRB, in a pediatric ALL patient, which encodes a protein with the kinase domain of PDGFRB but lacks the partner peptide.
  • The study confirmed that NRIP1::PDGFRB has oncogenic potential and can be effectively targeted by various ABL1-specific inhibitors like imatinib and dasatinib, highlighting a novel fusion gene pattern in Ph-like ALL.
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Article Synopsis
  • Most cervical adenocarcinomas are linked to HPV, but gastric-type cervical adenocarcinoma (GAS) is aggressive and HPV-independent, making treatment challenging due to chemotherapy resistance.
  • Researchers created patient-derived xenografts (PDXs) from two GAS patients and analyzed protein biomarkers to explore drug development possibilities.
  • The study found that HER3 was frequently overexpressed in both patient and PDX tumors, indicating potential new treatment avenues targeting HER3 and HER2 for GAS patients.
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Article Synopsis
  • - Mucopolysaccharidosis type II (MPS II) is an X-linked genetic disorder caused by a lack of the enzyme iduronate-2-sulfatase (IDS), leading to issues like cognitive decline, bone deformities, and internal organ problems.
  • - Researchers created a mouse model lacking the IDS enzyme, discovering a specific genetic modification that impaired enzyme activity and caused an accumulation of certain sugars in the body.
  • - The study found that these deficiency mice had enlarged skull bones due to increased bone formation, especially in a specific part of the skull, which could explain the larger head sizes seen in people with MPS II.
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variants in Brazilian Gaucher disease patients.

Mol Genet Metab Rep

December 2023

Basic Research and Advanced Investigations in Neurosciences Laboratory, Experimental Research Center, Hospital de Clínicas de Porto Alegre (HCPA), Porto Alegre, RS, Brazil.

Article Synopsis
  • Gaucher disease (GD) is an inherited disorder caused by a deficiency in the enzyme glucocerebrosidase due to genetic mutations, and this study focuses on the genetic profiles of 72 Brazilian patients with the disease.
  • The research identified 31 pathogenic variants, with the N370S mutation being the most common, found in 41% of patients, and a significant genotype was N370S/RecI, present in 23.6% of the cases.
  • Two new variants were discovered, and while full exon sequencing is the best approach, the study suggests a targeted analysis of specific exons could be effective for Brazilian GD patients.
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Key Clinical Message: EDTA-dependent pseudothrombocytopenia as well as myelosuppression should be suspected when thrombocytopenia occurs in patients with autoimmune disease during chemotherapy.

Abstract: A patient with pancreatic cancer and ulcerative colitis developed transient ethylenediaminetetraacetic acid (EDTA)-dependent pseudothrombocytopenia with exacerbation of ulcerative colitis during chemotherapy. Unfortunately, pseudothrombocytopenia could not be immediately detected because thrombocytopenia was masked by a reasonable time course of adverse events associated with chemotherapy and ulcerative colitis recurrence.

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Herbal products have been very popular in Pakistan for their curative significance against various disorders. Demaghi (DEMG) is a widely used herbal product claimed to own natural substances having neuroprotective potential. The current study aims to scientifically validate the chemical composition as well as its neuroprotective claims of this widely used herbal tonic.

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Cell Therapy Improves Quality-of-Life in Heart Failure: Outcomes From a Phase III Clinical Trial.

Stem Cells Transl Med

February 2024

Department of Cardiovascular Medicine, Center for Regenerative Medicine, Marriott Heart Disease Research Program, Van Cleve Cardiac Regenerative Medicine Program, Mayo Clinic, Rochester, MN, USA.

Article Synopsis
  • Heart failure patients struggle with daily activities and have a low quality of life, which necessitates more than just tracking deaths and hospitalizations to measure treatment effectiveness.
  • In the CHART-1 trial, both cell therapy and placebo showed similar improvements in quality of life as measured by the Minnesota Living with Heart Failure Questionnaire (MLHFQ), although cell therapy benefited a specific subgroup with advanced heart conditions.
  • The study suggests that cell therapy may enhance quality of life and reduce hospitalizations in certain patients, indicating the need for more research to validate these findings and potentially improve heart failure management.
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Article Synopsis
  • - The study investigates how cancers develop resistance to anti-cancer drugs like platinum drugs by analyzing the molecular networks of drugs like cisplatin, carboplatin, and oxaliplatin across different cancers.
  • - It focuses on diffuse-type stomach adenocarcinoma, known for its aggressive behavior, and reveals key genes and pathways involved in resistance, particularly in relation to lung adenocarcinoma and large B-cell lymphoma.
  • - The findings highlight the role of tumor microenvironment and potential interactions with microRNAs, suggesting new targets for developing treatments against drug-resistant cancers.
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The purpose of this study was to query healthcare practitioners (HCPs) who treat firefighter injuries to identify risk factors and mechanisms associated with musculoskeletal injuries during exercise. A phenomenological design was utilized to understand the experiences of HCPs while treating firefighters' musculoskeletal injuries due to exercise. Semi-structured interviews were conducted with 14 HCPs.

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Modern regenerative medicine dictionary: an augmented guide to biotherapy.

Regen Med

December 2023

Marriott Heart Disease Research Program, Department of Cardiovascular Medicine, Department of Molecular Pharmacology & Experimental Therapeutics, Department of Clinical Genomics, Mayo Clinic, Rochester, MN 55905, USA.

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Neurological manifestations in PMM2-congenital disorders of glycosylation (PMM2-CDG): Insights into clinico-radiological characteristics, recommendations for follow-up, and future directions.

Genet Med

February 2024

Department of Clinical Genomics, Mayo Clinic, Rochester, MN; Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN; Department of Medical Genetics, University Medical School, Pecs, Hungary.

Purpose: In the absence of prospective data on neurological symptoms, disease outcome, or guidelines for system specific management in phosphomannomutase 2-congenital disorders of glycosylation (PMM2-CDG), we aimed to collect and review natural history data.

Methods: Fifty-one molecularly confirmed individuals with PMM2-CDG enrolled in the Frontiers of Congenital Disorders of Glycosylation natural history study were reviewed. In addition, we prospectively reviewed a smaller cohort of these individuals with PMM2-CDG on off-label acetazolamide treatment.

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Objectives: Sensorineural hearing loss (SNHL) occurs commonly as part of mitochondriopathies and varies in severity and onset. In this study, we characterized hearing with specific consideration for hearing loss as a potential early indicator of mitochondrial disease (MD). We hypothesize that genetic testing at the earliest detection of SNHL may lead to an earlier MD diagnosis.

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The phosphatidylinositol glycan anchor biosynthesis class O protein (PIGO) enzyme is an important step in the biosynthesis of glycosylphosphatidylinositol (GPI), which is essential for the membrane anchoring of several proteins. Bi-allelic pathogenic variants in lead to a congenital disorder of glycosylation (CDG) characterized by global developmental delay, an increase in serum alkaline phosphatase levels, congenital anomalies including anorectal, genitourinary, and limb malformations in most patients; this phenotype has been alternately called "Mabry syndrome" or "hyperphosphatasia with impaired intellectual development syndrome 2." We report a 22-month-old female with PIGO deficiency caused by novel variants.

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Intracerebroventricular enzyme replacement therapy in patients with neuronopathic mucopolysaccharidosis type II: Final report of 5-year results from a Japanese open-label phase 1/2 study.

Mol Genet Metab

December 2023

Department of Clinical Genomics, Saitama Medical University, 1397-1 Yamane, Hidaka, Saitama 350-1241, Japan; Division of Medical Genetics, National Center for Child Health and Development, 2-10-1 Okura, Setagaya-ku, Tokyo 157-8535, Japan. Electronic address:

Intravenous idursulfase is standard treatment for mucopolysaccharidosis II (MPS II) in Japan. In the interim analysis of this open-label, phase 1/2 study (Center for Clinical Trials, Japan Medical Association: JMA-IIA00350), intracerebroventricular (ICV) idursulfase beta was well tolerated, suppressed cerebrospinal fluid (CSF) heparan sulfate (HS) levels, and stabilized developmental decline over 100 weeks in Japanese children with MPS II. Here, we report the final study results, representing 5 years of ICV idursulfase beta treatment.

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Proteomic Profiling Identifies Distinct Regulation of Proteins in Obese Diabetic Patients Treated with Metformin.

Pharmaceuticals (Basel)

September 2023

Proteomics Resource Unit, Obesity Research Center, College of Medicine, King Saud University, P.O. Box 2925 (98), Riyadh 11461, Saudi Arabia.

: Obesity and type 2 diabetes mellitus (T2DM) are characterized by underlying low-grade chronic inflammation. Metformin has been used as the first line of therapy in T2DM as it decreases hepatic glucose production and glucose intestinal absorption, enhances insulin sensitivity and weight loss, and is known to ameliorate inflammation. The mechanisms through which metformin exerts its effect remain unclear.

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(1) Background: Mutations in , a transcriptional regulator of immunomodulating proteins, are a known cause of inborn errors of immunity. Our proband is a 22-year-old male with a diagnosis of common variable immunodeficiency (CVID), cytopenias with massive splenomegaly, and nodular regenerative hyperplasia of the liver. Genetic studies identified a novel, single-point mutation variant in , c.

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Introduction: Vosoritide is the first precision medical therapy approved to increase growth velocity in children with achondroplasia. Sharing early prescribing experiences across different regions could provide a framework for developing practical guidance for the real-world use of vosoritide.

Methods: Two meetings were held to gather insight and early experience from experts in Europe, the Middle East, and the USA.

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There is a broad phenotypic spectrum of monogenic polycystic kidney diseases (PKDs). These disorders often involve cilia-related genes and lead to the development of fluid-filled cysts and eventual kidney function decline and failure. Preimplantation genetic testing for monogenic (PGT-M) disorders has moved into the clinical realm.

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Inflammatory Rhabdomyoblastic Tumor: Clinicopathologic and Molecular Analysis of 13 Cases.

Mod Pathol

January 2024

Department of Diagnostic Pathology, National Cancer Center Hospital, Tokyo, Japan; Rare Cancer Center, National Cancer Center, Tokyo, Japan. Electronic address:

Inflammatory rhabdomyoblastic tumors (IRMTs) are newly recognized skeletal muscle tumors with uncertain malignant potential. We investigated 13 IRMTs using clinicopathologic, genetic, and epigenetic methods. The cohort included 7 men and 6 women, aged 23 to 80 years (median, 50 years), of whom 2 had neurofibromatosis type 1.

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Multiple system atrophy (MSA) is a rare and progressive neurodegenerative disorder characterized by motor and autonomic dysfunction. Accurate and early diagnosis of MSA is challenging due to its clinical similarity with other neurodegenerative disorders, such as Parkinson's disease and atypical parkinsonian disorders. Currently, MSA diagnosis is based on clinical criteria drawing from the patient's symptoms, lack of response to levodopa therapy, neuroimaging studies, and exclusion of other diseases.

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CSF1R-related disorder: State of the art, challenges, and proposition of a new terminology.

Parkinsonism Relat Disord

April 2024

Department of Neurology, Mayo Clinic, Jacksonville, FL, USA. Electronic address:

Recent developments in adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ALSP) and other disorders due to CSF1R variants led to the emergence of symptomatic and prophylactic treatment options. The growing body of knowledge on genetics, pathomechanisms, clinical, and radiological features in patients harboring CSF1R variants challenges the current concepts and terminology to define the disorders, in addition to bringing up new questions on genotype-phenotype relationships. Therefore, this paper discusses the present complexities and challenges in the research on ALSP due to CSF1R variants.

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Proteomics Investigation of the Impact of the Secretome on MCF-7 Tumor Cells.

Int J Mol Sci

October 2023

Proteomics Resource Unit, Obesity Research Center, College of Medicine, King Saud University, Riyadh 11461, Saudi Arabia.

Breast cancer is the most prevalent form of cancer among women. The microenvironment of a cancer tumor is surrounded by various cells, including the microbiota. An imbalance between microbes and their host may contribute to the development and spread of breast cancer.

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