104 results match your criteria: "DFG Center for Functional Nanostructures[Affiliation]"

Cells mechanical behaviour in physiological environments is mediated by interactions with the extracellular matrix (ECM). In particular, cells can adapt their shape according to the availability of ECM proteins, e.g.

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Controlling Fibronectin Fibrillogenesis Using Visible Light.

Front Mol Biosci

July 2020

DFG-Center for Functional Nanostructures, Karlsruhe Institute of Technology, Karlsruhe, Germany.

We previously developed a surface-assisted assay to image early steps of cell-induced plasma fibronectin (FN) fibrillogenesis by timelapse atomic force microscopy (AFM). Unexpectedly, complementary attempts to visualize FN fibrillogenesis using fluorescently labeled FN (Alexa Fluor 488 or 568) and live-cell light microscopy initially failed consistently. Further analysis revealed that fibrillar remodeling was inhibited efficiently in the focal area illuminated during fluorescence imaging, but progressed normally elsewhere on the substrate, suggesting photo sensitivity of the FN fibrillogenesis process.

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αVβ3 integrin can bind to multiple extracellular matrix proteins, including vitronectin (Vn) and fibronectin (Fn), which are often presented to cells in culture as homogenous substrates. However, in tissues, cells experience highly complex and changing environments. To better understand integrin ligand selection in such complex environments, we employed binary-choice substrates of Fn and Vn to dissect αVβ3 integrin-mediated binding to different ligands on the subcellular scale.

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Tspan8 exhibits a functional role in many cancer types including pancreatic, colorectal, oesophagus carcinoma, and melanoma. We present a first study on the expression and function of Tspan8 in breast cancer. Tspan8 protein was present in the majority of human primary breast cancer lesions and metastases in the brain, bone, lung, and liver.

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Directed placement of solution-based nanomaterials at predefined locations with nanoscale precision limits bottom-up integration in semiconductor process technology. We report a method for electric-field-assisted placement of nanomaterials from solution by means of large-scale graphene layers featuring nanoscale deposition sites. The structured graphene layers are prepared via either transfer or synthesis on standard substrates, and then are removed once nanomaterial deposition is completed, yielding material assemblies with nanoscale resolution that cover surface areas >1 mm.

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CD44, a large family of transmembrane glycoproteins, plays decisive roles in physiological and pathological conditions. CD44 isoforms are involved in several signaling pathways essential for life such as growth factor-induced signaling by EGF, HGF or VEGF. CD44 is also the main hyaluronan (HA) receptor and as such is involved in HA-dependent processes.

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Actomyosin contractility and RhoGTPases affect cell-polarity and directional migration during haptotaxis.

Integr Biol (Camb)

October 2016

Zoological Institute, Department of Cell- and Neurobiology, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 4, 76131 Karlsruhe, Germany. and DFG-Center for Functional Nanostructures (CFN), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany and Institute of Functional Interfaces, Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany.

Article Synopsis
  • The study investigates haptotaxis, the process where cells migrate towards gradients of proteins attached to a substrate, highlighting the mechanics behind it that are not well understood.
  • Researchers created controlled fibronectin dot patterns to analyze how various factors like dot size and concentration affect fibroblast movement, finding that specific conditions led to optimal cell migration towards areas of higher fibronectin density.
  • The findings revealed that cell movement depends on intracellular forces and interactions among proteins like RhoA, Cdc42, and aPKCζ, which play crucial roles in recognizing and responding to adhesive gradients during haptotaxis.
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A Hexakis Terpyridine-Fullerene Ligand in Six-Fold Ruthenium, Iridium, and Iron Complexes: Synthesis and Electrochemical Properties.

Chemistry

August 2016

Institute for Organic Chemistry and, DFG Center for Functional Nanostructures (CFN), Karlsruhe Institute of Technology (KIT), Campus South, Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany.

An unprecedented straightforward route to six-fold terpyridine ligands around C60 , the latter being regioselectively functionalized in pseudo-octahedral positions using a six-fold Bingel reaction, is reported. Ruthenium, iridium, and iron complexes have been synthesized, and unambiguously characterized by NMR, MS, and cyclic voltammetry.

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Concealed d-wave pairs in the s± condensate of iron-based superconductors.

Proc Natl Acad Sci U S A

May 2016

Institute for Theory of Condensed Matter, Karlsruhe Institute of Technology, 76131 Karlsruhe, Germany; DFG Center for Functional Nanostructures, Karlsruhe Institute of Technology, 76128 Karlsruhe, Germany.

A central question in iron-based superconductivity is the mechanism by which the paired electrons minimize their strong mutual Coulomb repulsion. In most unconventional superconductors, Coulomb repulsion is minimized through the formation of higher angular momentum Cooper pairs, with Fermi surface nodes in the pair wavefunction. The apparent absence of such nodes in the iron-based superconductors has led to a belief they form an s-wave ([Formula: see text]) singlet state, which changes sign between the electron and hole pockets.

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Silica is the second most abundant biomineral being exceeded in nature only by biogenic CaCO3. Many land plants (such as rice, cereals, cucumber, etc.) deposit silica in significant amounts to reinforce their tissues and as a systematic response to pathogen attack.

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We evaluate the suitability of conventional sample preparation and labelling methods for two superresolution techniques, structured illumination microscopy and direct stochastic optical reconstruction microscopy, by a comparison to established confocal laser scanning microscopy. We show that SIM is compatible with standard fixation procedures and immunofluorescence labelling protocols and improves resolution by a factor of two compared to confocal laser scanning microscopy. With direct stochastic optical reconstruction microscopy, fluorophores can theoretically be localized with much higher precision.

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Fibronectin (FN) is an extracellular matrix protein that can be assembled by cells into large fibrillar networks, but the dynamics of FN remodeling and the transition through intermediate fibrillar stages are incompletely understood. Here we used a combination of fluorescence microscopy and time-lapse atomic force microscopy (AFM) to visualize initial stages of FN fibrillogenesis in living fibroblasts at high resolution. Initial FN nanofibrils form within <5 min of cell-matrix contact and subsequently extend at a rate of 0.

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Cell type-specific adaptation of cellular and nuclear volume in micro-engineered 3D environments.

Biomaterials

November 2015

Karlsruhe Institute of Technology (KIT), Zoological Institute, Department of Cell- and Neurobiology, Haid-und-Neu-Straße 9, D-76131 Karlsruhe, Germany; Karlsruhe Institute of Technology (KIT), DFG-Center for Functional Nanostructures (CFN), Wolfgang-Gaede-Straße 1a, D-76131 Karlsruhe, Germany; Karlsruhe Institute of Technology (KIT), Institute of Functional Interfaces (IFG), 76344 Eggenstein-Leopoldshafen, Germany. Electronic address:

Bio-functionalized three-dimensional (3D) structures fabricated by direct laser writing (DLW) are structurally and mechanically well-defined and ideal for systematically investigating the influence of three-dimensionality and substrate stiffness on cell behavior. Here, we show that different fibroblast-like and epithelial cell lines maintain normal proliferation rates and form functional cell-matrix contacts in DLW-fabricated 3D scaffolds of different mechanics and geometry. Furthermore, the molecular composition of cell-matrix contacts forming in these 3D micro-environments and under conventional 2D culture conditions is identical, based on the analysis of several marker proteins (paxillin, phospho-paxillin, phospho-focal adhesion kinase, vinculin, β1-integrin).

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Geometric quantum noise of spin.

Phys Rev Lett

May 2015

Institut für Theoretische Physik, Universität zu Köln, Zülpicher Straße 77, D-50937 Köln, Germany.

The presence of geometric phases is known to affect the dynamics of the systems involved. Here, we consider a quantum degree of freedom, moving in a dissipative environment, whose dynamics is described by a Langevin equation with quantum noise. We show that geometric phases enter the stochastic noise terms.

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The interactions between hydrophobic or semihydrophobic gold and silver nanoparticles (NPs) and a dimyristoylphosphatidylcholine (DMPC) bilayer as a model cell membrane in two ionic solutions result in the structural reorganization within the bilayer manifested as locally increased nanomechanical compaction in the vicinity of NP clusters as well as changed overall thermotropic properties. The effects of NP surface charge and hydrophobicity were examined using AFM imaging, force spectroscopy and IR spectroscopy. The NP clustering occurred during hydration process of dry films containing both the DMPC molecules and the NPs by the mechanism in which the number of bilayer deformations was reduced by NP clustering.

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Subcellular stretch-induced cytoskeletal response of single fibroblasts within 3D designer scaffolds.

Biomaterials

March 2015

Institute of Applied Physics (APH), Karlsruhe Institute of Technology (KIT), 76128 Karlsruhe, Germany; DFG-Center for Functional Nanostructures (CFN), and Institute of Nanotechnology (INT), Karlsruhe Institute of Technology (KIT), 76128 Karlsruhe, Germany. Electronic address:

In vivo, cells are exposed to mechanical forces in many different ways. These forces can strongly influence cell functions or may even lead to diseases. Through their sensing machinery, cells are able to perceive the physical information of the extracellular matrix and translate it into biochemical signals resulting in cellular responses.

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Circular-polarization-sensitive metamaterial based on triple-quantum-dot molecules.

Phys Rev Lett

December 2014

Institut für Theoretische Festkörperphysik, Karlsruhe Institute of Technology, 76128 Karlsruhe, Germany and DFG Center for Functional Nanostructures (CFN), Karlsruhe Institute of Technology, 76128 Karlsruhe, Germany.

We propose a new type of chiral metamaterial based on an ensemble of artificial molecules formed by three identical quantum dots in a triangular arrangement. A static magnetic field oriented perpendicular to the plane breaks mirror symmetry, rendering the molecules sensitive to the circular polarization of light. By varying the orientation and magnitude of the magnetic field one can control the polarization and frequency of the emission spectrum.

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Imaging collagen type I fibrillogenesis with high spatiotemporal resolution.

Ultramicroscopy

February 2015

JPK Instruments AG, Bouchéstrasse 12, 12435 Berlin, Germany.

Fibrillar collagens, such as collagen type I, belong to the most abundant extracellular matrix proteins and they have received much attention over the last five decades due to their large interactome, complex hierarchical structure and high mechanical stability. Nevertheless, the collagen self-assembly process is still incompletely understood. Determining the real-time kinetics of collagen type I formation is therefore pivotal for better understanding of collagen type I structure and function, but visualising the dynamic self-assembly process of collagen I on the molecular scale requires imaging techniques offering high spatiotemporal resolution.

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Implementation of a quantum metamaterial using superconducting qubits.

Nat Commun

October 2014

1] Physikalisches Institut, Karlsruhe Institute of Technology, D-76131 Karlsruhe, Germany [2] Russian Quantum Center, 100 Novaya Street, Skolkovo, Moscow region 143025, Russia [3] National University of Science and Technology MISIS, Leninsky prosp. 4, Moscow 119049, Russia.

The key issue for the implementation of a metamaterial is to demonstrate the existence of collective modes corresponding to coherent oscillations of the meta-atoms. Atoms of natural materials interact with electromagnetic fields as quantum two-level systems. Artificial quantum two-level systems can be made, for example, using superconducting nonlinear resonators cooled down to their ground state.

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Signature of the Dirac cone in the properties of linear oligoacenes.

Nat Commun

September 2014

1] Institut für Nanotechnologie, Karlsruhe Institute of Technology (KIT), PO Box 3640, 76021 Karlsruhe, Germany [2] DFG Center for Functional Nanostructures, Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Str. 1a, 76131 Karlsruhe, Germany [3] Institut für Theorie der Kondensierten Materie, Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Str. 1, 76128 Karlsruhe, Germany.

Organic electronics offers prospects of functionality for science, industry and medicine that are new as compared with silicon technology and available at a very low material cost. Among the plethora of organic molecules available for materials design, polymers and oligomers are very promising, for example, because of their mechanical flexibility. They consist of repeated basic units, such as benzene rings, and the number of these units N determines their excitation gap, a property that is often used in proposals of organic photovoltaics.

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An elasto-mechanical unfeelability cloak made of pentamode metamaterials.

Nat Commun

June 2014

1] Institute of Applied Physics and DFG-Center for Functional Nanostructures (CFN), Karlsruhe Institute of Technology (KIT), 76128 Karlsruhe, Germany [2] Institute of Nanotechnology (INT), Karlsruhe Institute of Technology (KIT), 76128 Karlsruhe, Germany [3] Nanoscribe GmbH, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany.

Metamaterial-based cloaks make objects different from their surrounding appear just like their surrounding. To date, cloaking has been demonstrated experimentally in many fields of research, including electrodynamics at microwave frequencies, optics, static electric conduction, acoustics, fluid dynamics, thermodynamics and quasi two-dimensional solid mechanics. However, cloaking in the seemingly simple case of three-dimensional solid mechanics is more demanding.

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Structure analysis and conformational transitions of the cell penetrating peptide transportan 10 in the membrane-bound state.

PLoS One

February 2015

Karlsruhe Institute of Technology (KIT), Institute of Organic Chemistry and DFG-Center for Functional Nanostructures (CFN), Karlsruhe, Germany; KIT, Institute of Biological Interfaces (IBG2), Karlsruhe, Germany.

Structure analysis of the cell-penetrating peptide transportan 10 (TP10) revealed an exemplary range of different conformations in the membrane-bound state. The bipartite peptide (derived N-terminally from galanin and C-terminally from mastoparan) was found to exhibit prominent characteristics of (i) amphiphilic α-helices, (ii) intrinsically disordered peptides, as well as (iii) β-pleated amyloid fibrils, and these conformational states become interconverted as a function of concentration. We used a complementary approach of solid-state (19)F-NMR and circular dichroism in oriented membrane samples to characterize the structural and dynamical behaviour of TP10 in its monomeric and aggregated forms.

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Assay for characterizing the recovery of vertebrate cells for adhesion measurements by single-cell force spectroscopy.

FEBS Lett

October 2014

Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 4058 Basel, Switzerland. Electronic address:

Single-cell force spectroscopy (SCFS) is becoming a widely used method to quantify the adhesion of a living cell to a substrate, another cell or tissue. The high sensitivity of SCFS permits determining the contributions of individual cell adhesion molecules (CAMs) to the adhesion force of an entire cell. However, to prepare adherent cells for SCFS, they must first be detached from tissue-culture flasks or plates.

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Metamaterials. Invisibility cloaking in a diffusive light scattering medium.

Science

July 2014

Institute of Applied Physics, Karlsruhe Institute of Technology (KIT), D-76128 Karlsruhe, Germany. Deutsche Forschungsgemeinschaft (DFG)-Center for Functional Nanostructures (CFN), KIT, D-76128 Karlsruhe, Germany. Institute of Nanotechnology, KIT, D-76021 Karlsruhe, Germany.

In vacuum, air, and other surroundings that support ballistic light propagation according to Maxwell's equations, invisibility cloaks that are macroscopic, three-dimensional, broadband, passive, and that work for all directions and polarizations of light are not consistent with the laws of physics. We show that the situation is different for surroundings leading to multiple light scattering, according to Fick's diffusion equation. We have fabricated cylindrical and spherical invisibility cloaks made of thin shells of polydimethylsiloxane doped with melamine-resin microparticles.

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Force-controlled manipulation of single cells: from AFM to FluidFM.

Trends Biotechnol

July 2014

Institute of Microbiology, ETH Zurich, Vladimir-Prelog-Weg 4, 8093 Zurich, Switzerland. Electronic address:

The ability to perturb individual cells and to obtain information at the single-cell level is of central importance for addressing numerous biological questions. Atomic force microscopy (AFM) offers great potential for this prospering field. Traditionally used as an imaging tool, more recent developments have extended the variety of cell-manipulation protocols.

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