27 results match your criteria: "Chicago Neuroscience Institute[Affiliation]"
Nat Commun
December 2024
Department of Organismal Biology and Anatomy, University of Chicago, Chicago, IL, 60637, USA.
Mechanisms of computation in sensorimotor cortex must be flexible and robust to support skilled motor behavior. Patterns of neuronal coactivity emerge as a result of computational processes. Pairwise spike-time statistical relationships, across the population, can be summarized as a functional network (FN) which retains single-unit properties.
View Article and Find Full Text PDFDevelopment
August 2024
Department of Neurobiology, University of Chicago, Chicago, IL 60637, USA.
Terminal selectors are transcription factors that control neuronal identity by regulating expression of key effector molecules, such as neurotransmitter biosynthesis proteins and ion channels. Whether and how terminal selectors control neuronal connectivity is poorly understood. Here, we report that UNC-30 (PITX2/3), the terminal selector of GABA nerve cord motor neurons in Caenorhabditis elegans, is required for neurotransmitter receptor clustering, a hallmark of postsynaptic differentiation.
View Article and Find Full Text PDFDev Cogn Neurosci
April 2024
Department of Psychology, Vanderbilt University, Nashville, TN 37240, USA. Electronic address:
Brain networks are continuously modified throughout development, yet this plasticity can also make functional networks vulnerable to early life stress. Little is currently known about the effect of early life stress on the functional organization of the brain. The current study investigated the association between environmental stressors and network topology using data from the Adolescent Brain Cognitive Development (ABCD®) Study.
View Article and Find Full Text PDFCell Rep
March 2024
Department of Neurobiology, University of Chicago, Chicago, IL 60637, USA; University of Chicago Neuroscience Institute, Chicago, IL 60637, USA. Electronic address:
Motor neurons (MNs) constitute an ancient cell type targeted by multiple adult-onset diseases. It is therefore important to define the molecular makeup of adult MNs in animal models and extract organizing principles. Here, we generate a comprehensive molecular atlas of adult Caenorhabditis elegans MNs and a searchable database.
View Article and Find Full Text PDFNat Commun
February 2024
Department of Psychology, University of Chicago, Chicago, IL, USA.
Implicit biases - differential attitudes towards members of distinct groups - are pervasive in human societies and create inequities across many aspects of life. Recent research has revealed that implicit biases are generally driven by social contexts, but not whether they are systematically influenced by the ways that humans self-organize in cities. We leverage complex system modeling in the framework of urban scaling theory to predict differences in these biases between cities.
View Article and Find Full Text PDFFASEB J
January 2024
Section of Emergency Medicine, Department of Medicine, University of Chicago, Chicago, Illinois, USA.
Front Neurosci
July 2023
Department of Psychology, Vanderbilt University, Nashville, TN, United States.
Background: Many studies of brain-behavior relationships rely on univariate approaches where each variable of interest is tested independently, which does not allow for the simultaneous investigation of multiple correlated variables. Alternatively, multivariate approaches allow for examining relationships between psychopathology and neural substrates simultaneously. There are multiple multivariate methods to choose from that each have assumptions which can affect the results; however, many studies employ one method without a clear justification for its selection.
View Article and Find Full Text PDFbioRxiv
August 2023
Department of Neurobiology, University of Chicago, Chicago, IL, 60637, USA.
Motor neurons (MNs) constitute an ancient cell type targeted by multiple adult-onset diseases. It is therefore important to define the molecular makeup of adult MNs in animal models and extract organizing principles. Here, we generated a comprehensive molecular atlas of adult MNs and a searchable database (http://celegans.
View Article and Find Full Text PDFBiol Psychiatry Glob Open Sci
July 2023
Department of Psychology, Vanderbilt University, Nashville, Tennessee.
Background: When brain networks deviate from typical development, this is thought to contribute to varying forms of psychopathology. However, research has been limited by the reliance on discrete diagnostic categories that overlook the potential for psychological comorbidity and the dimensional nature of symptoms.
Methods: This study examined the topology of functional networks in association with 4 bifactor-defined psychopathology dimensions-general psychopathology, internalizing symptoms, conduct problems, and attention-deficit/hyperactivity disorder symptoms-via the Child Behavior Checklist in a sample of 3568 children from the ABCD (Adolescent Brain Cognitive Development) Study.
Front Mol Neurosci
June 2023
Institute for Integrative Physiology, The University of Chicago, Chicago, IL, United States.
Underdeveloped breathing results from premature birth and causes intermittent hypoxia during the early neonatal period. Neonatal intermittent hypoxia (nIH) is a condition linked to the increased risk of neurocognitive deficit later in life. However, the mechanistic basis of nIH-induced changes to neurophysiology remains poorly resolved.
View Article and Find Full Text PDFSemin Cell Dev Biol
February 2024
Department of Neurobiology, University of Chicago, Chicago, IL, USA; Committee on Development, Regeneration and Stem Cell Biology, University of Chicago, Chicago, IL, USA; Committee on Genetics, Genomics, and Systems Biology, University of Chicago, Chicago, IL, USA; University of Chicago Neuroscience Institute, Chicago, IL, USA. Electronic address:
Neurons are remarkably long-lived, non-dividing cells that must maintain their functional features (e.g., electrical properties, chemical signaling) for extended periods of time - decades in humans.
View Article and Find Full Text PDFNetw Neurosci
June 2023
Committee on Computational Neuroscience, University of Chicago, Chicago, IL, USA.
Skillful, voluntary movements are underpinned by computations performed by networks of interconnected neurons in the primary motor cortex (M1). Computations are reflected by patterns of coactivity between neurons. Using pairwise spike time statistics, coactivity can be summarized as a ().
View Article and Find Full Text PDFEMBO Rep
June 2023
Department of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL, USA.
Teneurins are conserved cell adhesion molecules essential for embryogenesis and neural development in animals. Key to teneurin function is the ability of its extracellular region to form homophilic interactions in cis and/or in trans. However, our molecular understanding of teneurin homophilic interaction remains largely incomplete.
View Article and Find Full Text PDFCell Rep
March 2023
Department of Neurobiology, University of Chicago, Chicago, IL 60637, USA; Committee on Neurobiology, University of Chicago, Chicago, IL 60637, USA; Committee on Development, Regeneration, and Stem Cell Biology, University of Chicago, Chicago, IL 60637, USA; University of Chicago Neuroscience Institute, Chicago, IL 60637, USA. Electronic address:
AT-rich interaction domain 3 (ARID3) transcription factors are expressed in the nervous system, but their mechanisms of action are largely unknown. Here, we provide, in vivo, a genome-wide binding map for CFI-1, the sole C. elegans ARID3 ortholog.
View Article and Find Full Text PDFElife
January 2023
Institute for Integrative Physiology, University of Chicago, Chicago, United States.
Obstructive sleep apnea (OSA) is characterized by sporadic collapse of the upper airway leading to periodic disruptions in breathing. Upper airway patency is governed by genioglossal nerve activity that originates from the hypoglossal motor nucleus. Mice with targeted deletion of the gene encoding the carbon monoxide (CO) producing enzyme, heme oxygenase-2 (HO-2), exhibit OSA, yet the contribution of central HO-2 dysregulation to the phenomenon is unknown.
View Article and Find Full Text PDFSemin Cell Dev Biol
December 2022
Department of Neurobiology, University of Chicago, 947 East 58th Street, Chicago, IL 60637, USA; University of Chicago Neuroscience Institute, 947 East 58th Street, Chicago, IL 60637, USA. Electronic address:
The nervous system emerges from a series of genetic programs that generate a remarkable array of neuronal cell types. Each cell type must acquire a distinct anatomical position, morphology, and function, enabling the generation of specialized circuits that drive animal behavior. How are these diverse cell types and circuits patterned along the anterior-posterior (A-P) axis of the animal body? Hox genes encode transcription factors that regulate cell fate and patterning events along the A-P axis of the nervous system.
View Article and Find Full Text PDFFront Cell Dev Biol
October 2022
Embryology: Modern Concepts and Techniques, Marine Biological Laboratory, Woods Hole, MA, United States.
Light sheet fluorescence microscopy (LSFM) has become a method of choice for live imaging because of its fast acquisition and reduced photobleaching and phototoxicity. Despite the strengths and growing availability of LSFM systems, no generalized LSFM mounting protocol has been adapted for live imaging of post-embryonic stages of . A major challenge has been to develop methods to limit animal movement using a mounting media that matches the refractive index of the optical system.
View Article and Find Full Text PDFJ Neurosci
November 2022
Department of Neurobiology, The University of Chicago, Chicago, Illinois 60637
Categorization is an essential cognitive and perceptual process for decision-making and recognition. The posterior parietal cortex, particularly the lateral intraparietal (LIP) area has been suggested to transform visual feature encoding into abstract categorical representations. By contrast, areas closer to sensory input, such as the middle temporal (MT) area, encode stimulus features but not more abstract categorical information during categorization tasks.
View Article and Find Full Text PDFNat Commun
October 2022
Department of Neurobiology, University of Chicago, Chicago, IL, USA.
Hox transcription factors play fundamental roles during early patterning, but they are also expressed continuously, from embryonic stages through adulthood, in the nervous system. However, the functional significance of their sustained expression remains unclear. In C.
View Article and Find Full Text PDFElife
June 2022
Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, United States.
How circuits self-assemble starting from neuronal stem cells is a fundamental question in developmental neurobiology. Here, we addressed how neurons from different stem cell lineages wire with each other to form a specific circuit motif. In larvae, we combined developmental genetics (twin-spot mosaic analysis with a repressible cell marker, multi-color flip out, permanent labeling) with circuit analysis (calcium imaging, connectomics, network science).
View Article and Find Full Text PDFJ Exp Biol
May 2022
Committee on Computational Neuroscience, University of Chicago, Chicago, IL 60637, USA.
Elife
March 2022
Department of Neurobiology, University of Chicago, Chicago, United States.
Spinal motor neurons (MNs) constitute cellular substrates for several movement disorders. Although their early development has received much attention, how spinal MNs become and remain terminally differentiated is poorly understood. Here, we determined the transcriptome of mouse MNs located at the brachial domain of the spinal cord at embryonic and postnatal stages.
View Article and Find Full Text PDFFront Neurosci
February 2022
Department of Neurobiology, University of Chicago, Chicago, IL, United States.
A remarkable diversity of cell types characterizes every animal nervous system. Previous studies provided important insights into how neurons commit to a particular fate, migrate to the right place and form precise axodendritic patterns. However, the mechanisms controlling later steps of neuronal development remain poorly understood.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
January 2022
Department of Psychology, University of Chicago, Chicago, IL 60637;
Proc Natl Acad Sci U S A
August 2021
The University of Chicago Neuroscience Institute, University of Chicago, Chicago, IL 60637
It is commonly assumed that cities are detrimental to mental health. However, the evidence remains inconsistent and at most, makes the case for differences between rural and urban environments as a whole. Here, we propose a model of depression driven by an individual's accumulated experience mediated by social networks.
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