45 results match your criteria: "Centre for Synthesis and Chemical Biology (CSCB)[Affiliation]"

Enantioselective Organozinc Addition to Aldehydes Using Planar Chiral [2.2]Paracyclophane-Imidazoline N,O-Ligands.

Chemistry

December 2024

Centre for Synthesis and Chemical Biology (CSCB), School of Chemistry, University College Dublin (UCD), Belfield, Dublin 4, Ireland.

We present an improved and convenient synthesis of [2.2]paracyclophane-imidazoline N,O-ligands with central and planar chirality in seven steps starting from [2.2]paracyclophane.

View Article and Find Full Text PDF

Catalytic Enantioselective [3+2] Cycloaddition of N-Metalated Azomethine Ylides.

Chemistry

May 2023

Centre for Synthesis and Chemical Biology (CSCB), School of Chemistry, University College Dublin (UCD) Belfield, Dublin 4, Ireland.

Article Synopsis
  • Asymmetric [3+2] cycloaddition reactions are effective methods for creating enantioenriched pyrrolidines, which are significant for biological and organocatalytic uses.
  • This review focuses on recent developments in the enantioselective synthesis of pyrrolidines through these reactions, specifically involving azomethine ylides and metal catalysis.
  • The review categorizes reactions based on the type of metal used and the complexity of the dipolarophile, discussing the benefits and challenges of each method.
View Article and Find Full Text PDF

Discovery of a new class of triazole based inhibitors of acetyl transferase KAT2A.

J Enzyme Inhib Med Chem

December 2022

Centre for Synthesis and Chemical Biology (CSCB), Department of Chemistry, Royal College of Surgeons in Ireland, Dublin, Ireland.

We have recently developed a new synthetic methodology that provided both -aryl-5-hydroxytriazoles and -pyridine-4-alkyl triazoles. A selection of these products was carried through virtual screening towards targets that are contemporary and validated for drug discovery and development. This study determined a number of potential structure target dyads of which -pyridinium-4-carboxylic-5-alkyl triazole displayed the highest score specificity towards KAT2A.

View Article and Find Full Text PDF

Zinc-Catalyzed Enantioselective [3+2] Cycloaddition of Azomethine Ylides Using Planar Chiral [2.2]Paracyclophane-Imidazoline N,O-ligands.

Angew Chem Int Ed Engl

August 2022

Centre for Synthesis and Chemical Biology (CSCB), School of Chemistry, University College Dublin (UCD), Belfield, Dublin 4, Ireland.

We present a facile synthetic route toward a novel series of imidazolinyl-[2.2]paracyclophanol (UCD-Imphanol) ligands possessing central and planar chirality. Both sets of diastereomeric ligands were successfully purified by column chromatography.

View Article and Find Full Text PDF

The 3D structure and surface characteristics of proteins and peptides are crucial for interactions with receptors or ligands and can be modified to some extent to modulate their biological roles and pharmacological activities. The introduction of halogen atoms on the side-chains of amino acids is a powerful tool for effecting this type of tuning, influencing both the physico-chemical and structural properties of the modified polypeptides, helping to first dissect and then rationally modify features that affect their mode of action. This review provides examples of the influence of different types of halogenation in amino acids that replace native residues in proteins and peptides.

View Article and Find Full Text PDF

Preparation of Acidic 5-Hydroxy-1,2,3-triazoles via the Cycloaddition of Aryl Azides with β-Ketoesters.

J Org Chem

September 2021

Centre for Synthesis and Chemical Biology (CSCB), Department of Chemistry, Royal College of Surgeons in Ireland, 123 St. Stephen's Green, Dublin 2, Ireland.

Herein, a high-yielding cycloaddition reaction of β-ketoesters and azides to provide 1,2,3-triazoles is described. The reactions employing 2-unsubstituted β-ketoesters were found to provide 5-methyl-1,2,3-triazoles, whereas 2-alkyl-substituted β-ketoesters provided 5-hydroxy-1,2,3-triazoles (shown to be relatively acidic) in high yields and as single regioisomers. Several novel compounds were reported and characterized including long-chain 5-hydroxy-1,2,3-triazoles potentially bioisosteric to hydroxamic acids.

View Article and Find Full Text PDF

Synthesis of α-Aryl Oxindoles by Friedel-Crafts Alkylation of Arenes.

J Org Chem

May 2020

Centre for Synthesis and Chemical Biology (CSCB), Synthesis and Solid State Pharmaceutical Centre (SSPC), School of Chemistry, University College Dublin (UCD), Belfield, Dublin 4, Ireland.

α-Aryl oxindoles are accessed from isatin via a two-step procedure involving a phospha-Brook rearrangement and a Friedel-Crafts alkylation in a one-pot procedure. The use of 1,1,1,3,3,3-hexafluoro-2-propanol as solvent significantly extended the reaction substrate scope to include relatively less electron-rich arenes including benzene. This new alkylation method is fast and straightforward and allows for the direct introduction of the oxindole moiety onto a range of aromatic compounds including phenols.

View Article and Find Full Text PDF

Herein, we present the first example of synthesis of 3,4-dihydropyran-2-ones from cinnamic thioesters via a stereoselective phase-transfer-catalyzed domino Michael-cyclization reaction with acetylacetone. The reaction proceeded under the catalysis of -derived quaternary ammonium phenoxide that, in combination with inorganic bases, provided 3,4-dihydropyran-2-ones in yields of up to 93% and enantioselectivities of up to 88% enantiomeric excess.

View Article and Find Full Text PDF

First enantioselective synthesis of gingesulfonic acids and unequivocal determination of their absolute stereochemistry.

Org Biomol Chem

February 2020

Centre for Synthesis and Chemical Biology (CSCB), Department of Chemistry, The Royal College of Surgeons in Ireland, 123 St. Stephen's Green, Dublin 2, Dublin, Ireland.

Herein we report the first organocatalysed enantioselective synthesis of gingesulfonic acids and shogasulfonic acids via a mild and convenient aminothiourea-catalysed conjugate addition of bisulfite to the olefin moiety of α,β-unsaturated carbonyls-a technology previously reported by us. A series of optically active naturally occurring sulfonic acids are prepared in their natural and unnatural configurations, and their absolute configurations are unequivocally confirmed by single crystal X-ray diffractometry.

View Article and Find Full Text PDF

Sulphide as a leaving group: highly stereoselective bromination of alkyl phenyl sulphides.

Chem Sci

October 2019

Centre for Synthesis and Chemical Biology (CSCB) , Department of Chemistry , Royal College of Surgeons in Ireland, 123 St. Stephen's Green , Dublin 2 , Ireland . Email: ; Email:

A conceptionally novel nucleophilic substitution approach to synthetically important alkyl bromides is presented. Using molecular bromine (Br), readily available secondary benzyl and tertiary alkyl phenyl sulphides are converted into the corresponding bromides under exceptionally mild, acid- and base-free reaction conditions. This simple transformation allows the isolation of elimination sensitive benzylic β-bromo carbonyl and nitrile compounds in mostly high yields and purities.

View Article and Find Full Text PDF

Development of and recent advances in asymmetric A3 coupling.

Chem Soc Rev

September 2019

Centre for Synthesis and Chemical Biology (CSCB), School of Chemistry, University College Dublin (UCD), Belfield, Dublin 4, Ireland.

Asymmetric A3 coupling has emerged as an important class of reactions to synthesise chiral propargylamines. In this tutorial review, an up to date progress of this reaction, with significant recent advancements in terms of ligand development, is presented. Applications of asymmetric A3 coupling in natural product synthesis and in tandem processes are also discussed.

View Article and Find Full Text PDF

Enantioselective Catalytic Asymmetric A3 Coupling with Phosphino-Imidazoline Ligands.

J Org Chem

May 2019

Centre for Synthesis and Chemical Biology (CSCB), Synthesis and Solid State Pharmaceutical Centre, School of Chemistry , University College Dublin (UCD), Belfield, Dublin 4 , Ireland.

A practical application of the UCD-PHIM ligand in the copper-catalyzed asymmetric A3 coupling is reported for aromatic, alkenylic, and alkynylic aldehydes under mild reaction conditions, low catalytic loading, and at ambient temperature. A broad range of aldehydes, secondary amines with a cheaper ethyne equivalent, 2-methyl-3-butyn-2-ol, was explored and enantioselectivities of up to 99% ee were obtained. The importance of (i) axial chirality and central chirality, (ii) imidazoline moiety over oxazoline moiety, and (iii) phosphine unit is investigated for A3 coupling by synthesizing and testing a series of related ligands to UCD-PHIM.

View Article and Find Full Text PDF

An enantioselective protocol for the desymmetrization of cis-3,5- O-arylidenecyclohexanones has been developed that proceeded under the catalysis of readily available and inexpensive Cinchona-derived quaternary ammonium salts. The synthetic relevance of the methodology was exemplified by the synthesis of a key intermediate that could be used in the preparation of the active pharmaceutical ingredient, paricalcitol (Zemplar).

View Article and Find Full Text PDF

Reaction of azides and enolisable aldehydes under the catalysis of organic bases and Cinchona based quaternary ammonium salts.

Org Biomol Chem

June 2017

Centre for Synthesis and Chemical Biology (CSCB), Royal College of Surgeons in Ireland (RCSI), Department of Pharmaceutical and Medicinal Chemistry, 123 St Stephen's Green, Dublin 2, Dublin, Republic of Ireland.

Herein we report a two-step sequence for the preparation of amides starting from azides and enolisable aldehydes. The reaction proceeded via the formation of triazoline intermediates that were converted into amides via Lewis acid catalysis. Preliminary studies on the preparation of triazolines under chiral phase transfer catalysis are also presented, demonstrating that enantioenriched amides could be prepared from achiral aldehydes in moderate to low enantioselectivity.

View Article and Find Full Text PDF

Desulfurative Chlorination of Alkyl Phenyl Sulfides.

Org Lett

February 2017

Centre for Synthesis and Chemical Biology (CSCB), Department of Pharmaceutical and Medicinal Chemistry, Royal College of Surgeons in Ireland, 123 St. Stephen's Green, Dublin 2, Ireland.

The chlorination of readily available secondary and tertiary alkyl phenyl sulfides using (dichloroiodo)benzene (PhICl) is reported. This mild and rapid nucleophilic chlorination is extended to sulfa-Michael derived sulfides, affording elimination-sensitive β-chloro carbonyl and nitro compounds in good yields. The chlorination of enantioenriched benzylic sulfides to the corresponding inverted chlorides proceeds with high stereospecificity, thus providing a formal entry into enantioenriched chloro-Michael adducts.

View Article and Find Full Text PDF

Enantioselective cyclopropanation of (Z)-3-substituted-2-(4-pyridyl)-acrylonitriles catalyzed by Cinchona ammonium salts.

Org Biomol Chem

March 2016

Centre for Synthesis and Chemical Biology (CSCB), Department of Pharmaceutical and Medicinal Chemistry, Royal College of Surgeons in Ireland, 123 St Stephen's Green, Dublin 2, Ireland.

Cyclopropane esters holding two quaternary centres were prepared in high yields, complete diastereoselection and up to 83% ee. The reaction described herein entailed reacting (Z)-3-substituted-2-(4-pyridyl)-acrylonitrile, a reactive class of Michael acceptor, with 2-bromomalonate esters in the presence of Cinchona derived phase-transfer catalysts. The reaction allowed multi-gram preparation of the desired products.

View Article and Find Full Text PDF

PNAs are emerging as useful synthetic devices targeting natural miRNAs. In particular 3 classes of structurally modified PNAs analogs are herein described, namely α, β and γ, which differ by their backbone modification. Their mode and binding affinity for natural nucleic acids and their use in medicinal chemistry as potential miRNA binders is discussed.

View Article and Find Full Text PDF

Catalytic asymmetric conjugate addition of isocyanoacetate to (Z)-3-substituted-2-(4-pyridyl)-acrylonitrile, a reactive class of Michael acceptor.

Chem Commun (Camb)

January 2016

Centre for Synthesis and Chemical Biology (CSCB), Department of Pharmaceutical and Medicinal Chemistry, Royal College of Surgeons in Ireland, 123 St. Stephen's Green, Dublin 2, Ireland.

(Z)-3-Substituted-2-(4-pyridyl)-acrylonitriles, a reactive class of Michael acceptors obtained exclusively as a single (Z) isomer, reacted with un-substituted isocyanoacetate esters mediated by phase-transfer catalysis to give, after base promoted cyclisation, functionalized imines in up to 94% ee and as a single diastereoisomer.

View Article and Find Full Text PDF

Catalytic enantioselective addition of isocyanoacetate to 3-methyl-4-nitro-5-styrylisoxazoles under phase transfer catalysis conditions.

Org Biomol Chem

November 2015

Centre for Synthesis and Chemical Biology (CSCB), Department of Pharmaceutical and Medicinal Chemistry, Royal College of Surgeons in Ireland, 123 St. Stephen's Green, Dublin 2, Ireland.

The reaction between 3-methyl-4-nitro-5-styrylisoxazoles and ethyl isocyanoacetate proceeded under phase transfer catalysis to give enantioenriched monoadducts in high enantiomeric excess (up to 99% ee). The resulting adducts were subsequently cyclised to give 2,3-dihydropyrroles and substituted pyrrolidines in identical high ees and as a single diastereoisomer.

View Article and Find Full Text PDF

An improved procedure to prepare 3-methyl-4-nitroalkylenethylisoxazoles and their reaction under catalytic enantioselective Michael addition with nitromethane.

Org Biomol Chem

February 2015

Centre for Synthesis and Chemical Biology (CSCB), Department of Pharmaceutical and Medicinal Chemistry, Royal College of Surgeons in Ireland, 123 St. Stephen's Green, Dublin 2, Ireland.

Herein, we describe a short synthesis of 3-methyl-4-nitro-5-alkylethenyl isoxazoles and their reactivity as Michael acceptors. The title compounds reacted with nitromethane under phase-transfer catalysis to provide highly enantioenriched adducts (up to 93% ee) which were then converted to the corresponding γ-nitroacids.

View Article and Find Full Text PDF

Automated flow cytometry for monitoring CHO cell cultures.

Methods

March 2012

School of Chemical and Bioprocess Engineering, Centre for Synthesis and Chemical Biology-CSCB, University College Dublin, Belfield, Dublin 4, Ireland.

Flow cytometry has been used to accurately monitor cell events that indicate the spatio-temporal state of a bioreactor culture. The introduction of process analytical technology (PAT) has led to process improvements using real-time or semi real-time monitoring systems. Integration of flow cytometry into an automated scheme for improved process monitoring can benefit PAT in bioreactor-based biopharmaceutical productions by establishing optimum process conditions and better quality protocols.

View Article and Find Full Text PDF

Phase transfer catalyzed enantioselective cyclopropanation of 4-nitro-5-styrylisoxazoles.

Chem Commun (Camb)

April 2012

Centre for Synthesis and Chemical Biology (CSCB), Department of Pharmaceutical and Medicinal Chemistry, Royal College of Surgeons in Ireland, 123 St. Stephen's Green, Dublin 2, Ireland.

Heavily substituted cyclopropane esters were prepared in high yields, complete diastereoselection and high (up to 96%) enantioselectivity. The reaction described herein entailed reacting 4-nitro-5-styrylisoxazoles, a class of cinnamate synthetic equivalent, with 2-bromomalonate esters under the catalysis of 5 mol% of a Cincona derived phase-transfer catalyst. The reaction allowed multi-gram preparation of desired products.

View Article and Find Full Text PDF

Synthesis and biological evaluation of achiral indole-substituted titanocene dichloride derivatives.

Int J Med Chem

May 2015

Conway Institute of Biomolecular and Biomedical Research, Centre for Synthesis and Chemical Biology (CSCB), UCD School of Chemistry and Chemical Biology, University College Dublin, Belfield, Dublin 4, Ireland.

Six new titanocene compounds have been isolated and characterised. These compounds were synthesised from their fulvene precursors using Super Hydride (LiBEt3H) followed by transmetallation with titanium tetrachloride to yield the corresponding titanocene dichloride derivatives. These complexes are bis-[((1-methyl-3-diethylaminomethyl)indol-2-yl)methylcyclopentadienyl] titanium (IV) dichloride (5a), bis-[((5-methoxy-1-methyl,3-diethylaminomethyl)indol-2-yl)methylcyclopentadienyl] titanium (IV) dichloride (5b), bis-[((1-methyl,3-diethylaminomethyl)indol-4-yl)methylcyclopentadienyl] titanium (IV) dichloride (5c), bis-[((5-bromo-1-methyl)indol-3-yl)methylcyclopentadienyl] titanium (IV) dichloride (5d), bis-[((5-chloro-1-methyl)indol-3-yl)methylcyclopentadienyl] titanium (IV) dichloride (5e), and bis-[((5-fluoro-1-methyl)indol-3-yl)methylcyclopentadienyl] titanium (IV) dichloride (5f).

View Article and Find Full Text PDF

Design, synthesis and structure of novel para-quinones and their antibacterial activity.

Chem Biol Drug Des

November 2011

Centre for Synthesis and Chemical Biology (CSCB), School of Chemistry and Chemical Biology, University College Dublin, Belfield, Dublin 4, Ireland.

Eight new para-quinones and one known analogue have been synthesized from p-chloranil. Five have been structurally characterized by single crystal diffraction, and a range of ligand folding is observed. All nine have been tested for their potency towards Gram(+) S.

View Article and Find Full Text PDF

Catalytic enantioselective addition of sodium bisulfite to chalcones.

Angew Chem Int Ed Engl

July 2011

Centre for Synthesis and Chemical Biology (CSCB), Department of Pharmaceutical and Medicinal Chemistry, Royal College of Surgeons in Ireland, 123 St. Stephen's Green, Dublin 2, Ireland.

View Article and Find Full Text PDF