122 results match your criteria: "Centre for Limnology[Affiliation]"
Intensifying extreme droughts are altering lentic ecosystems and disrupting services provisioning. Unfortunately, drought research often lacks a holistic and intersectoral consideration of drought impacts, which can limit relevance of the insights for adaptive management. This literature review evaluated the current state of lake and reservoir extreme drought research in relation to biodiversity and three ecosystem services.
View Article and Find Full Text PDFISME J
January 2024
Department of Aquatic Microbial Ecology, Institute of Hydrobiology, Biology Centre of the Czech Academy of Sciences, 37005, České Budějovice, Czech Republic.
Sci Data
June 2024
Department of River Ecology and Conservation, Senckenberg Research Institute and Natural History Museum Frankfurt, Gelnhausen, 63571, Germany.
Microbiologyopen
June 2024
Centre for Limnology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu County, Estonia.
The factors that influence the distribution of bacterial community composition are not well understood. The role of geographical patterns, which suggest limited dispersal, is still a topic of debate. Bacteria associated with hosts face unique dispersal challenges as they often rely on their hosts, which provide specific environments for their symbionts.
View Article and Find Full Text PDFNat Ecol Evol
March 2024
Department of River Ecology and Conservation, Senckenberg Research Institute and Natural History Museum Frankfurt, Gelnhausen, Germany.
Humans impact terrestrial, marine and freshwater ecosystems, yet many broad-scale studies have found no systematic, negative biodiversity changes (for example, decreasing abundance or taxon richness). Here we show that mixed biodiversity responses may arise because community metrics show variable responses to anthropogenic impacts across broad spatial scales. We first quantified temporal trends in anthropogenic impacts for 1,365 riverine invertebrate communities from 23 European countries, based on similarity to least-impacted reference communities.
View Article and Find Full Text PDFNature
August 2023
Department of River Ecology and Conservation, Senckenberg Research Institute and Natural History Museum Frankfurt, Gelnhausen, Germany.
Owing to a long history of anthropogenic pressures, freshwater ecosystems are among the most vulnerable to biodiversity loss. Mitigation measures, including wastewater treatment and hydromorphological restoration, have aimed to improve environmental quality and foster the recovery of freshwater biodiversity. Here, using 1,816 time series of freshwater invertebrate communities collected across 22 European countries between 1968 and 2020, we quantified temporal trends in taxonomic and functional diversity and their responses to environmental pressures and gradients.
View Article and Find Full Text PDFJ Fish Dis
October 2023
Chair of Aquaculture, Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia.
Proliferative kidney disease caused by the myxozoan parasite Tetracapsuloides bryosalmonae has been actively studied in juvenile salmonids for decades. However, very little is known about parasite prevalence and its geographical and intra-host distribution at older life stages. We screened T.
View Article and Find Full Text PDFNat Commun
June 2023
Northern Water Problems Institute, Karelian Research Centre RAS, Petrozavodsk, Russia.
J Plankton Res
June 2022
Marine Research Centre, Finnish Environment Institute, Latokartanonkaari 11, FI-00790 Helsinki, Finland.
We analyzed phytoplankton biodiversity trends in a 52 year (1967-2018) monitoring time-series from the archipelago of Helsinki, Gulf of Finland, the Baltic Sea. The community ordination revealed strong ordering of samples along the time axis (generalized additive model-gam fit: = 0.9).
View Article and Find Full Text PDFAquat Bot
December 2022
Centre for Limnology, Institute of Agricultural and Environmental Sciences, Chair of Hydrobiology and Fishery, Estonian University of Life Sciences, Rannu 61117, Tartu, Estonia.
Aquatic macrophyte taxonomic composition, species abundance and cover determine the physical structure, complexity and heterogeneity of aquatic habitats - the structuring role of macrophytes. These traits influence richness, distribution, feeding and strength of the relationships between food web communities in lakes. The aim of this study was to determine how lakes with different dominating macrophyte ecological groups affect planktonic food web components, emphasising the influence on young of year (YOY) fish and large (≥1 +) fish community.
View Article and Find Full Text PDFJ Environ Manage
December 2022
Institute of Technology, University of Tartu, Nooruse 1, Tartu, Estonia. Electronic address:
Ballast water is a main vector of introduction of potentially harmful or pathogenic aquatic organisms. The development of genetic tools for ballast water monitoring has been underway and highlighted as a source for accurate and reliable data for decision making. We used 16S rRNA gene amplicon sequencing to analyze the microbial communities found in the ballast water of fifteen commercial ships routed through two Estonian ports.
View Article and Find Full Text PDFNew Microbes New Infect
September 2022
Estonian University of Life Sciences, Centre for Limnology, EE61101, Elva, Tartu County, Estonia.
Nat Commun
October 2022
National Center for Theoretical Sciences, Taipei, 10617, Taiwan.
Nat Commun
August 2022
Northern Water Problems Institute, Karelian Research Centre RAS, Petrozavodsk, Russia.
The quality of lake ice is of uppermost importance for ice safety and under-ice ecology, but its temporal and spatial variability is largely unknown. Here we conducted a coordinated lake ice quality sampling campaign across the Northern Hemisphere during one of the warmest winters since 1880 and show that lake ice during 2020/2021 commonly consisted of unstable white ice, at times contributing up to 100% to the total ice thickness. We observed that white ice increased over the winter season, becoming thickest and constituting the largest proportion of the ice layer towards the end of the ice cover season when fatal winter drownings occur most often and light limits the growth and reproduction of primary producers.
View Article and Find Full Text PDFMol Ecol
December 2023
Centre for Limnology, Estonian University of Life Sciences, Tartu, Estonia.
The gut microbiome is one of the most important sites of host-microbe interactions, however, mechanisms governing the responses of host-associated microbes to changing environmental conditions are poorly understood. To address this, we investigated individual and combined effects of dietary changes and increase in salinity (from freshwater to salinity 3) or antibiotic concentration on the gastrointestinal bacterial community of the aquatic snail Ampullaceana balthica. In parallel, the energy reserves of the host were quantified.
View Article and Find Full Text PDFNat Commun
March 2022
National Center for Theoretical Sciences, Taipei, 10617, Taiwan.
Untangling causal links and feedbacks among biodiversity, ecosystem functioning, and environmental factors is challenging due to their complex and context-dependent interactions (e.g., a nutrient-dependent relationship between diversity and biomass).
View Article and Find Full Text PDFSci Total Environ
June 2022
Department of Biology, University of Southern Denmark, Campusvej 55, 5230 Odense M, Denmark.
Characteristics of bottom sediments in lake mesocosms 11 years after starting the experiment were studied in order to determine the effects of nutrient loading, temperature increase and vegetation type on concentration and vertical distribution of phosphorus (P) forms. The experimental setup consisted of 24 outdoor flow-through mesocosms with two nutrient treatments - low (L) and high (H) and 3 temperature levels - ambient (T0), heated by 2-4 °C (T1) and 3-6 °C (T2) in four replicates. Thickness of the organic sediment was measured and the sediment analysed for dry weight, organic matter, and P fractions (according to a sequential extraction scheme) and organic P compounds (by P nuclear magnetic resonance spectroscopy).
View Article and Find Full Text PDFZootaxa
September 2021
Estonian University of Life Sciences, Centre for Limnology, EE-61117 Rannu, Tartumaa, Estonia .
The purpose of our contribution is to propose a robust and practical order-level classification of the families of Oligochaeta, that is, non-leech Clitellata. The order level is mandatory in Linnaean rank-based classification and is also required in many internet-based biodiversity databases. However, it has received little attention in oligochaete systematics, and the few available order-level classifications of Oligochaeta no longer represent phylogenetic relationships adequately.
View Article and Find Full Text PDFPLoS One
September 2021
Research Centre for Limnology, Indonesian Institute of Sciences, Cibinong, Indonesia.
A Bayesian Belief Network, validated using past observational data, is applied to conceptualize the ecological response of Lake Maninjau, a tropical lake ecosystem in Indonesia, to tilapia cage farms operating on the lake and to quantify its impacts to assist decision making. The model captures ecosystem services trade-offs between cage farming and native fish loss. It is used to appraise options for lake management related to the minimization of the impacts of the cage farms.
View Article and Find Full Text PDFWater Res
February 2021
Itasca Biological Station and Laboratories, University of Minnesota Twin Cities, Lake Itasca, MI 56740, United States.
Zootaxa
June 2020
Estonian University of Life Sciences, Centre for Limnology, 61117 Rannu, Tartumaa, Estonia..
The aquatic oligochaete genus Pararhyacodrilus Snimščikova, 1986 included four species, P. aspersus Snimščikova, 1986, the type species, P. palustris (Ditlevsen, 1904), P.
View Article and Find Full Text PDFGlob Chang Biol
December 2020
Limnology Laboratory, Department of Biological Sciences, Middle East Technical University, Ankara, Turkey.
Submerged macrophytes are of key importance for the structure and functioning of shallow lakes and can be decisive for maintaining them in a clear water state. The ongoing climate change affects the macrophytes through changes in temperature and precipitation, causing variations in nutrient load, water level and light availability. To investigate how these factors jointly determine macrophyte dominance and growth, we conducted a highly standardized pan-European experiment involving the installation of mesocosms in lakes.
View Article and Find Full Text PDFFront Microbiol
May 2020
Centre for Limnology, Estonian University of Life Sciences, Tartu, Estonia.
Differences in salinity are boundaries that act as barriers for the dispersal of most aquatic organisms. This creates distinctive biota in freshwater and brackish water (mesohaline) environments. To test how saline boundaries influence the diversity and composition of host-associated microbiota, we analyzed the microbiome within the digestive tract of , an organism able to cross the freshwater and mesohaline boundary.
View Article and Find Full Text PDFSci Rep
May 2020
Limnology/Department of Ecology and Genetics, Uppsala University, Uppsala, Sweden.
The pool of dissolved organic carbon (DOC), is one of the main regulators of the ecology and biogeochemistry of inland water ecosystems, and an important loss term in the carbon budgets of land ecosystems. We used a novel machine learning technique and global databases to test if and how different environmental factors contribute to the variability of in situ DOC concentrations in lakes. In order to estimate DOC in lakes globally we predicted DOC in each lake with a surface area larger than 0.
View Article and Find Full Text PDFNat Commun
May 2020
Ontario Ministry of the Environment, Conservation and Parks, 125 Resources Road, Toronto, ON, M9P 3V6, Canada.
Globally, our knowledge on lake fisheries is still limited despite their importance to food security and livelihoods. Here we show that fish catches can respond either positively or negatively to climate and land-use changes, by analyzing time-series data (1970-2014) for 31 lakes across five continents. We find that effects of a climate or land-use driver (e.
View Article and Find Full Text PDF