19 results match your criteria: "Centre for Bioinformatics and Photonics (CIBioFi)[Affiliation]"
Cells
November 2023
Grupo de Nutrición, Facultad de Salud, Universidad del Valle, Cali 760043, Colombia.
Sensors (Basel)
July 2023
PACDE SAS, Pacific+, Av 9a #21n-97, Cali 760043, Valle del Cauca, Colombia.
The present study contains an experimental analysis of the vibratory response in a low-cylinder engine motorcycle at varying suspension preloads. Three different speed bumps of varying heights were used to subject the motorcycle to different vibrations. The analysis was carried out in three domains: time, frequency, and time-frequency.
View Article and Find Full Text PDFInt J Mol Sci
October 2022
Heterocyclic Compounds Research Group, Department of Chemistry, Universidad del Valle, A.A., Cali 25360, Colombia.
A new series of sulfonamides, , and , were synthesized by -sulfonation reaction with sulfonyl chlorides . Five new series of chalcone-sulfonamide hybrids were prepared via Claisen-Schmidt condensation of the newly obtained sulfonamides with aromatic aldehydes in basic medium. Chalcones substituted with chlorine at position 4 of each series were used as precursors for the generation of their five-membered heterocyclic pyrazoline (, () and carbothioamide derivatives.
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October 2022
Grupo de Nutrición, Facultad de Salud, Universidad del Valle, Cali 760043, Colombia.
Due to the lack of chemotherapeutic drugs that selectively affect cervical cancer cells, natural sources such as snake venom are currently being investigated for molecules with antitumor potential. , a phospholipase A type-Asp49 from snake venom, induced cell death in a cervical cancer cell line-Ca Ski-related to dysfunction in the ability to resolve endoplasmic reticulum stress, evidenced by sub-expression of genes such as PERK, ERO1 PDIs, HSP70, and CHOP. Western blot analysis validated the last two genes' sub-expression at the protein level.
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February 2022
Centre for Bioinformatics and Photonics-CIBioFi, Universidad del Valle, Calle 13 No. 100-00, Edificio E20 No. 1069, 760032 Cali, Colombia.
Solar cells based on organic compounds are a proven emergent alternative to conventional electrical energy generation. Here, we provide a computational study of power conversion efficiency optimization of boron dipyrromethene (BODIPY) derivatives by means of their associated open-circuit voltage, short-circuit density, and fill factor. In doing so, we compute for the derivatives' geometrical structures, energy levels of frontier molecular orbitals, absorption spectra, light collection efficiencies, and exciton binding energies via density functional theory (DFT) and time-dependent (TD)-DFT calculations.
View Article and Find Full Text PDFJ Phys Chem A
April 2021
Centre for Bioinformatics and Photonics-CIBioFi, Universidad del Valle, Calle 13 No. 100-00, Edificio E20 No. 1069, 760032 Cali, Colombia.
Photoinduced electron transfer in multichromophore molecular systems is defined by a critical interplay between their core unit configuration (donor, molecular bridge, and acceptor) and their system-solvent coupling; these lead to energy and charge transport processes that are key in the design of molecular antennas for efficient light harvesting and organic photovoltaics. Here, we quantify the ultrafast non-Markovian dissipative dynamics of electron transfer in D-π-A molecular photosystems comprising 1,3,5,7-tetramethyl-8-phenyl-4,4-difluoroboradiazaindacene (BODIPY), Zn-porphyrin, fulleropyrrolidine, and fulleroisoxazoline. We find that the stabilization energy of the charge transfer states exhibits a significant variation for different polar (methanol, tetrahydrofuran (THF)) and nonpolar (toluene) environments and determine such sensitivity according to the molecular structure and the electron-vibration couplings that arise at room temperature.
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August 2020
Centre for Bioinformatics and Photonics (CIBioFi), Universidad del Valle, Edificio E20 No. 1069, 760032 Cali, Colombia.
Emergent technologies that make use of novel materials and quantum properties of light states are at the forefront in the race for the physical implementation, encoding and transmission of information. Photonic crystals (PCs) enter this paradigm with optical materials that allow the control of light propagation and can be used for optical communication, and photonics and electronics integration, making use of materials ranging from semiconductors, to metals, metamaterials, and topological insulators, to mention but a few. Here, we show how designer superconductor materials integrated into PCs fabrication allow for an extraordinary reduction of electromagnetic waves damping, making possible their optimal propagation and tuning through the structure, below critical superconductor temperature.
View Article and Find Full Text PDFArch Pharm (Weinheim)
May 2020
Grupo de Investigación de Compuestos Heterocíclicos, Departamento de Química, Universidad del Valle, Cali, Colombia.
A new series of N-substituted pyrazoline derivatives 6a-g, 7a-g, 8a-g, and 9a-g was synthetized by reaction of hydrazine derivatives and chalcone-thiazole hybrids bearing nitrogen mustard 5a-g. The chalcones 5a-g were obtained by Claisen-Schmidt condensation of thiazole-2-nitrogen mustard 3 and selected acetophenones 4a-g. These new compounds 6/7/8/9a-g were screened for their antifungal activity against Cryptococcus neoformans, with IC values of 3.
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November 2019
Instituto de Química Médica (IQM, CSIC), Juan de la Cierva 3, 28006 Madrid, Spain.
New substituted benzo[g]indazoles functionalized with a 6-nitro and 6-amino groups have been synthesized by the reaction of benzylidene tetralones with hydrazine in acetic acid. The resulting conformationally-constrained compounds were evaluated for their antiproliferative activity against selected cancer cell lines. The nitro-based indazoles , , and have shown IC values between 5-15 μM against the lung carcinoma cell line NCI-H460.
View Article and Find Full Text PDFPhys Chem Chem Phys
June 2019
Centre for Bioinformatics and Photonics (CIBioFi), Universidad del Valle, Calle 13 No. 100-00, Edificio E20 No. 1069, 760032 Cali, Colombia. and Departamento de Física, Universidad del Valle, 760032 Cali, Colombia.
Understanding electron transfer in organic molecules is of great interest in quantum materials for light harvesting, energy conversion and integration of molecules into solar cells. This, however, poses the challenge of designing specific optimal molecular structure for which the processes of ultrafast quantum coherence and electron transport are not so well understood. In this work, we investigate subpicosecond time scale quantum dynamics and electron transfer in an efficient electron acceptor rhodanine chromophoric complex.
View Article and Find Full Text PDFEur J Med Chem
August 2019
Heterocyclic Compounds Research Group, Department of Chemistry, Universidad del Valle, Cali, A.A, 25360, Colombia; Centre for Bioinformatics and Photonics-CIBioFI, Universidad del Valle, Cali, A.A, 25360, Colombia. Electronic address:
New sulfonamides 5/6 derived from 4-methoxyacetophenone 1 were synthesized by N-sulfonation reaction of ammonia (3) and aminopyrimidinone (4) with its sulfonyl chloride derivative 2. Sulfonamides 5 and 6 were used as precursors of two new series of chalcones 8a-f and 9a-f, which were obtained through Claisen-Schmidt condensation with aromatic aldehydes 7a-f. Compounds 5/6, 8a-d, 8f, 9a-d, and 9f were screened by the US National Cancer Institute (NCI) at 10 μM against sixty different human cancer cell lines (one-dose trial).
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April 2019
Biology department (Departamento de biología), Universidad del Valle, Street 13 No. 100-00, 760032, Cali, Colombia.
Insects harbor a wide variety of microorganisms that form complex and changing communities and play an important role in the biology and evolution of their hosts. Aphids have been used as model organisms to study microorganism-insect interactions. Almost all aphids are infected with the obligate endosymbiont Buchnera aphidicola and can host different bacteria that allow them to acquire traits of agronomic importance, such as resistance to high temperatures and/or defense against natural enemies.
View Article and Find Full Text PDFJ Phys Chem A
November 2018
Centre for Bioinformatics and Photonics-CIBioFi, Universidad del Valle , Calle 13 No. 100-00, Edificio E20, No. 1069, Cali 760032 , Colombia.
Push-pull functional compounds consisting of dicyanorhodanine derivatives have attracted a lot of interest because their optical, electronic, and charge transport properties make them useful as building blocks for organic photovoltaic implementations. The analysis of the frontier molecular orbitals shows that the vertical transitions of electronic absorption are characterized as intramolecular charge transfer; furthermore, we show that the analyzed compounds exhibit bathochromic displacements when comparing the presence (or absence) of solvent as an interacting medium. In comparison with materials defined by their energy of reorganization of electrons (holes) as electron (hole) transporters, we find a transport hierarchy whereby the molecule ( Z)-2-(1,1-dicyanomethylene)-5-[(4-dimethylamino)benzylidene]-1,3-thiazol-4 is better at transporting holes than molecule ( Z)-2-(1,1-dicyanomethylene)-5-(tetrathiafulvalene-2-ylidene)-1,3-thiazol-4.
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August 2018
Heterocyclic Compounds Research Group, Department of Chemistry, Universidad del Valle, A.A. 25360 Cali, Colombia.
A new series of 1,3,5-triazine-containing 2-pyrazoline derivatives (⁻)⁻ was synthesized by cyclocondensation reactions of [(4,6-bis((2-hydroxyethyl)amino)-1,3,5-triazin-2-yl)amine]chalcones ⁻ with hydrazine hydrate and derivatives. Chalcones ⁻ were obtained by Claisen-Schmidt condensation between aromatic aldehydes and triazinic derivative , which was synthesized in high yield by a microwave-assisted reaction. Seventeen of the synthesized compounds were selected and tested by the US National Cancer Institute (NCI) for their anticancer activity against 58 different human tumor cell lines.
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November 2017
University Institute for Intelligent Systems and Numerical Applications in Engineering (SIANI), University of Las Palmas de Gran Canaria, 35017 Las Palmas de Gran Canaria, Spain.
We propose a highly sensitive sensor based on enhancing the transversal magneto-optical Kerr effect (TMOKE) through excitation of surface plasmon resonances in a novel and simple architecture, which consists of a metal grating on a metal magneto-optical layer. Detection of the change in the refractive index of the analyte medium is made by monitoring the angular shift of the Fano-like resonances associated with TMOKE. A higher resolution is obtained with this technique than with reflectance curves.
View Article and Find Full Text PDFSmall
November 2017
Organic and Hybrid Electronics, Macromolecular Chemistry I, University of Bayreuth, Universitätstr. 30, 95447, Bayreuth, Germany.
Organic-inorganic metal halide perovskites (e.g., CH NH PbI Cl ) emerge as a promising optoelectronic material.
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March 2017
Centre for Bioinformatics and Photonics-CIBioFi, Calle 13 No. 100-00, Edificio 320 No. 1069, 760032 Cali, Colombia.
Game theory is a well established branch of mathematics whose formalism has a vast range of applications from the social sciences, biology, to economics. Motivated by quantum information science, there has been a leap in the formulation of novel game strategies that lead to new (quantum Nash) equilibrium points whereby players in some classical games are always outperformed if sharing and processing joint information ruled by the laws of quantum physics is allowed. We show that, for a bipartite non zero-sum game, input local quantum correlations, and separable states in particular, suffice to achieve an advantage over any strategy that uses classical resources, thus dispensing with quantum nonlocality, entanglement, or even discord between the players' input states.
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August 2016
Organic and Hybrid Electronics, Macromolecular Chemistry I, University of Bayreuth, Universitätstr. 30, Bayreuth 95447, Germany.
Inorganic-organic halide organometal perovskites have demonstrated very promising performance for opto-electronic applications, such as solar cells, light-emitting diodes, lasers, single-photon sources, etc. However, the little knowledge on the underlying photophysics, especially on a microscopic scale, hampers the further improvement of devices based on this material. In this communication, correlated conventional photoluminescence (PL) characterization and wide-field PL imaging as a function of time are employed to investigate the spatially- and temporally-resolved PL in CH₃NH₃PbI3-xClx perovskite films.
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December 2014
Departamento de Física, Faculdade de Ciências, UNESP, Bauru, SP, CEP 17033-360, Brazil.
Most works on open quantum systems generally focus on the reduced physical system by tracing out the environment degrees of freedom. Here we show that the qubit distributions with the environment are essential for a thorough analysis, and demonstrate that the way that quantum correlations are distributed in a quantum register is constrained by the way in which each subsystem gets correlated with the environment. For a two-qubit system coupled to a common dissipative environment E, we show how to optimise interqubit correlations and entanglement via a quantification of the qubit-environment information flow, in a process that, perhaps surprisingly, does not rely on the knowledge of the state of the environment.
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