25 results match your criteria: "Centre de Biologie et Pathologie Nord[Affiliation]"

Article Synopsis
  • A study conducted in France during the 2023-24 RSV season analyzed the effectiveness of nirsevimab, a monoclonal antibody, in preventing RSV infections in infants, focusing on breakthrough cases.
  • Out of 695 RSV-infected infants, researchers sequenced the full-length RSV genome of 545 infants, identifying that 48% had breakthrough infections despite receiving nirsevimab.
  • While no resistance was found in RSV-A infections from nirsevimab-treated infants, two cases of RSV-B showed substitutions linked to resistance, indicating a potential concern for the antibody's effectiveness against this variant.
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Cefiderocol in Difficult-to-Treat Nf-GNB in ICU Settings.

Ann Intensive Care

May 2024

Département d'Anesthésie Réanimation, Centre Hospitalier Lyon Sud, Hospices Civils de Lyon, Lyon, France.

Background: The efficacy and safety of cefiderocol in ICU patients with difficult-to-treat resistance (DTR) non-fermenting Gram-negative bacteria (Nf-GNB) are not as well-established. Consequently, we conducted a cohort study to compare Cefiderocol with the Best Available Therapy (BAT) in ICU patients.

Methods: We included adult patients from 9 different ICUs, including a burn ICU unit, from 2019 to 2023 treated with Cefiderocol for DTR Nf-GNB isolated from the blood or lungs.

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Diagnostic, clinical management, and outcome of bone flap-related osteomyelitis after cranioplasty.

Int J Infect Dis

December 2023

Department of Infectious Diseases, Reference Center for the Management of Complex Bone and Joint Infections (CRIOAc, Lyon), Hospices Civils de Lyon, Lyon, France; CIRI - Centre International de Recherche en Infectiologie, Inserm, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308, Ecole Normale Supérieure de Lyon, Univ Lyon, Lyon, France. Electronic address:

Article Synopsis
  • The study analyzed the diagnosis, treatment, and outcomes of osteomyelitis related to bone flaps after cranioplasty in 144 patients from 2008 to 2021.
  • The majority of patients showed wound issues, with common pathogens identified as Staphylococcus aureus and Cutibacterium acnes; surgeries were performed in nearly all cases.
  • Findings indicated a significant treatment failure rate of 26.1%, with factors like the initial surgery for brain tumors and specific surgical techniques affecting outcomes, suggesting a need for specialized, long-term care in dedicated centers.
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Case series of 12 Bartonella quintana endocarditis from the Southwest Indian Ocean.

PLoS Negl Trop Dis

September 2023

Laboratoire de Bactériologie, CHU Félix Guyon, Saint-Denis, La Réunion, France.

Background: Bartonella spp. are fastidious bacteria frequently identified as the cause of blood culture-negative (BCN) endocarditis. However, Bartonella infections are difficult to diagnose in routine laboratory testing and their incidence is probably underestimated.

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Rapid, Easy, and Reliable Identification of sp. by MALDI-TOF Mass Spectrometry, VITEK-MS IVD V3.2 Database, Using Direct Deposit.

Int J Mol Sci

March 2023

Hospices Civils de Lyon, Laboratoire de Biologie Médicale Multi-Sites, Centre de Biologie et Pathologie Nord, Institut des Agents Infectieux, Laboratoire de Biologie Médicale de Référence des Nocardioses, 69004 Lyon, France.

The reference methods for identification are based on gene sequencing. These methods are time-consuming and not accessible for all laboratories. Conversely, matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry is easy to use and widely available in clinical laboratories, but for identification, the VITEK-MS manufacturer recommends a tedious step of colony preparation that is difficult to integrate into a laboratory workflow.

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Matrix Assisted Laser Desorption Ionisation/Time Of Flight (MALDI/TOF) mass spectrometry is not done revolutionizing clinical microbiology diagnostic.

Clin Microbiol Infect

February 2023

Hospices Civils de Lyon, 24/7 Microbiology Platform, Institut des Agents Infectieux, Centre de Biologie et Pathologie Nord, Lyon, France; Centre International de Recherche en Infectiologie, Inserm U1111, Université Claude Bernard Lyon 1, Lyon, France.

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Microbial risk assessment of in polluted environments, case of urban rainfall water.

Comput Struct Biotechnol J

December 2020

UMR Ecologie Microbienne, CNRS 5557, INRA 1418, Research Team on Bacterial Opportunistic Pathogens and Environment, VetAgro Sup and University, Lyon 1, F-69363 Lyon, France.

Unlabelled: Urban Infiltration Basins (UIBs) are used to manage urban runoff transfers and feed aquifers. These UIBs can accumulate urban pollutants and favor the growth of potentially pathogenic biological agents as .

Objectives: To assess the spatio-temporal dynamics of pathogenic in UIBs and to stablish phylogenetic relationships between clinical and UIB strains.

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Multicentric evaluation of BioFire FilmArray Pneumonia Panel for rapid bacteriological documentation of pneumonia.

Clin Microbiol Infect

September 2021

Service de Bactériologie-Hygiène hospitalière, CHU de Rennes, CNR de la Résistance aux Antibiotiques (laboratoire associé 'Entérocoques), Rennes, France; Unité Inserm U1230, Université de Rennes 1, Rennes, France. Electronic address:

Article Synopsis
  • The study aimed to evaluate the BioFire FilmArray Pneumonia Panel (FA-PP) for detecting bacterial pathogens and antibiotic resistance genes in respiratory samples like sputum and bronchoalveolar lavage.
  • Conducted in 11 French hospitals, the study found the FA-PP detected pathogens in 74.6% of specimens, performing well against conventional methods with a high positive agreement rate and capturing additional bacterial species not found by culture.
  • The results suggest that FA-PP can enhance diagnostic accuracy for pneumonia, indicating it could serve as a rapid and effective complement to traditional testing methods.
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Use of artificial intelligence for tailored routine urine analyses.

Clin Microbiol Infect

August 2021

Plateau de Microbiologie 24/24, Institut des Agents Infectieux, France.

Objectives: Urine is the most common material tested in clinical microbiology laboratories. Automated analysis is already performed, permitting quicker results and decreasing the laboratory technologist's (LT) workload. These automatic systems have introduced digital imaging concepts.

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Background: Improving timeliness of pathogen identification is crucial to allow early adaptation of antibiotic therapy and improve prognosis in patients with pneumonia. We evaluated the relevance of a new syndromic rapid multiplex PCR test (rm-PCR) on respiratory samples to guide empirical antimicrobial therapy in adult patients with community-acquired pneumonia (CAP), hospital-acquired pneumonia (HAP), and ventilator-acquired pneumonia (VAP).

Methods: This retrospective multicenter study was conducted in four French university hospitals.

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Early bacterial co-infection in ARDS related to COVID-19.

Intensive Care Med

September 2020

Médecine Intensive-Réanimation, Hôpital Edouard Herriot, Hospices Civils de Lyon, 5 place d'Arsonval, 69437, Lyon Cedex 03, France.

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Antibiotics are well-known disruptive elements of the intestinal microbiota and antibiotic-associated diarrhea appeared as the most common complication related with post-antibiotic dysbiosis. Lactobacillus rhamnosus GG (LGG) strain is very effective in preventing antibiotic-associated diarrhea in children and adults. However, as any probiotics, it is concerned by the loss of viability during storage and gastrointestinal transit.

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Background: Acyclovir (ACV) is the most commonly used drug for herpes simplex virus (HSV) infection therapy. Prolonged antiviral therapy or prophylaxis in immunocompromised patients may promote the development of drug-resistant strains. Due to the high polymorphism in genes involved in drug resistance, phenotypic methods, although work-intensive, are still required to test drug susceptibility.

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Article Synopsis
  • Four draft genome sequences of different strains are reported, including a pathogenic type strain (DSM 44484) and two environmental isolates (EML446 and EML1456).
  • The nonpathogenic type strain (ATCC 19247) is also included, with genome sizes estimated between 6.3 to 6.8 Mb.
  • Analyzing these isolates will enhance our understanding of the physiology, evolution, and pathogenicity of these species.
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The Surface-enhanced Raman spectroscopy (SERS) method based on gold nanoparticles as SERS substrate was investigated for the label-free detection and quantification of probiotic bacteria that are widely used in various pharmaceutical formulations. Indeed, the development of a simple and fast SERS method dedicated to the quantification of bacteria should be very useful for the characterization of such formulations in a more convenient way than the usually performed tedious and time-consuming conventional counting method. For this purpose, uncoated near-spherical gold nanoparticles were developed at room temperature by acidic treatment of star-like gold nanoparticle precursors.

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[Ochrobactrum anthropi catheter-related infection associated with superior vena cava syndrome].

Med Mal Infect

October 2019

Service de Médecine Interne, Centre Hospitalier Universitaire de la Croix Rousse, Groupement Hospitalier Nord, Hospices Civils de Lyon, 69317 Lyon cedex 04, France; Faculté de Médecine Lyon Sud Charles Mérieux, 69600 Oullins, France. Electronic address:

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[Staphylococcal toxic shock syndrome should be considered in the event of diffuse erythema with fever and shock].

Ann Dermatol Venereol

April 2019

Service de dermatologie-infectiologie, CHI Fréjus Saint-Raphaël, 240, avenue de Saint-Lambert, 83600 Fréjus, France.

Background: Toxic shock syndrome (TSS) was first described by Todd in 1978. The relevant Lancet publication reported 7 cases of children with fever, exanthema, hypotension and diarrhoea associated with multiple organ failure. An association between TSS and use of hyper-absorbent tampons in menstruating women was discovered in the 1980s.

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High Intraspecific Genetic Diversity of , a Pathogen Responsible for Cutaneous Nocardiosis Found in France: Phylogenetic Relationships by Using and Genes.

Biomed Res Int

October 2018

Research Group on "Bacterial Opportunistic Pathogens and Environment", UMR Ecologie Microbienne, CNRS 5557, INRA 1418, UCBL, Université de Lyon, VetAgro Sup, Faculté de Pharmacie, 8 avenue Rockefeller, Lyon, France.

This study aims at genetic characterization and phylogenetic relationships of focusing by using housekeeping , and genes. is the species responsible for 80% of cases of actinomycetoma, one form of cutaneous nocardiosis which occurs mainly in tropical regions reaching immunocompetent patients in which the disease can lead to amputation. We analyze 36 indigenous cases of that happened in France.

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Sepsis is the leading cause of death among patients in intensive care units (ICUs) requiring an early diagnosis to introduce efficient therapeutic intervention. Rapid identification (ID) of a causative pathogen is key to guide directed antimicrobial selection and was recently shown to reduce hospitalization length in ICUs. Direct processing of positive blood cultures by MALDI-TOF MS technology is one of the several currently available tools used to generate rapid microbial ID.

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Direct Identification of Staphylococcus aureus and Determination of Methicillin Susceptibility From Positive Blood-Culture Bottles in a Bact/ALERT System Using Binax Now S. aureus and PBP2a Tests.

Ann Lab Med

July 2015

Hospices Civils de Lyon, Laboratoire de Bactériologie, Centre de Biologie et de Pathologie Est, Bron, France. ; Hospices Civils de Lyon, Centre National de Référence des Staphylocoques, Centre de Biologie et de Pathologie Est, Bron, France. ; International Center for Research in Infectiology, INSERM U 1111, Lyon, France. ; Université de Lyon, Faculté de Médecine Lyon Est, Domaine de la Buire, Lyon, France.

Staphylococcus aureus bacteremia is associated with high mortality and morbidity, requiring prompt and appropriate antimicrobial treatment. Therefore, it is important to detect methicillin-resistant S. aureus (MRSA) rapidly from blood cultures.

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[Lymphoma-like lesions of the endometrium].

Ann Pathol

December 2008

Service d'anatomie et cytologie pathologiques des hôpitaux Nord, centre de biologie et pathologie Nord, hôpital de la Croix-Rousse, 103 Grande-Rue de la Croix-Rousse, 69317 Lyon cedex 04, France.

Chronic endometritis is a rare entity characterized by an endometrial plasmocytic infiltrate. The lymphoid infiltrate may be abundant and simulate a lymphoma of the uterus. We report two cases of lymphoma-like lesions of the endometrium in two postmenopausal women of 79 and 89 year-old, who presented with abundant vaginal discharge.

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