SIGIRR plays a dual role in zebrafish infected with Edwardsiella piscicida: boosting digestive system wellness and mitigating inflammation.

Single immunoglobulin interleukin-1 receptor-associated protein (SIGIRR) negatively regulates the inflammatory response induced by bacterial infection by inhibiting the excessive synthesis of inflammatory mediators and overactivation. This inhibitory mechanism reduces the fish's susceptibility to pathogens and enhances survival rates. Zebrafish lacking the SIGIRR gene were generated using CRISPR/Cas9 gene knockout technology.

Genome size influences plant growth and biodiversity responses to nutrient fertilization in diverse grassland communities.

Experiments comparing diploids with polyploids and in single grassland sites show that nitrogen and/or phosphorus availability influences plant growth and community composition dependent on genome size; specifically, plants with larger genomes grow faster under nutrient enrichments relative to those with smaller genomes. However, it is unknown if these effects are specific to particular site localities with speciifc plant assemblages, climates, and historical contingencies. To determine the generality of genome size-dependent growth responses to nitrogen and phosphorus fertilization, we combined genome size and species abundance data from 27 coordinated grassland nutrient addition experiments in the Nutrient Network that occur in the Northern Hemisphere across a range of climates and grassland communities.

Seasonal dynamics of groundwater discharge: Unveiling the complex control over reservoir greenhouse gas emissions.

The pronounced topographical differences, giving rise to numerous water bodies, also endow these formations with substantial hydraulic gradients, leading to pronounced groundwater discharge within their low-lying, natural reservoir settings. However, the dynamics of groundwater discharge in reservoirs and their impact on greenhouse gas (GHG) production and emission under different conditions remain unclear. This study focuses on a reservoir in southeastern China, where we conducted seasonal field observations alongside microcosm incubation experiments to elucidate the relationship between greenhouse gas emissions and groundwater discharge.

Effects of climate and forest development on habitat specialization and biodiversity in Central European mountain forests.

Mountain forests are biodiversity hotspots with competing hypotheses proposed to explain elevational trends in habitat specialization and species richness. The altitudinal-niche-breadth hypothesis suggests decreasing specialization with elevation, which could lead to decreasing species richness and weaker differences in species richness and beta diversity among habitat types with increasing elevation. Testing these predictions for bacteria, fungi, plants, arthropods, and vertebrates, we found decreasing habitat specialization (represented by forest developmental stages) with elevation in mountain forests of the Northern Alps - supporting the altitudinal-niche-breadth hypothesis.

Comprehensive analysis of Capsicum annuum CaLhcs uncovered the roles of CaLhca5.1 and CaLhcb1.7 in photosynthesis and stress tolerance.

The light-harvesting chlorophyll a/b-binding proteins (Lhcs) are integral to plants' capture and transfer of light energy during photosynthesis. However, the Lhc gene family remains unexplored in pepper. In this study, 37 CaLhcs (Capsicum annuum Lhc) were identified from the reference genome and classified into five subfamilies (Lhca, Lhcb, CP24, CP26, and CP29) based on phylogenetic relationships and conserved domains, with members of each subfamily displaying similar conserved motifs and gene structures.

Temporal variability of litter pollution of rivers in Germany - A long-term assessment by schoolchildren as citizen scientists.

Understanding litter dynamics on riversides is challenging due to the need for extensive data. A seven-year citizen science study with schoolchildren showed no major changes in litter density, composition, and sources on German riversides. The study categorized 26,757 macrolitter items (> 2.

Toward harnessing biodiversity-ecosystem function relationships in fungi.

Fungi are crucial for terrestrial ecosystems, yet the role of fungal diversity in ecosystem functions remains unclear. We synthesize fungal biodiversity and ecosystem function (BEF) relationships, focusing on plant biomass production, carbon storage, decomposition, and pathogen or parasite resistance. The observed BEF relationships for these ecosystem functions vary in strength and direction, complicating generalizations.

Facade eluates affect active and total soil microbiome.

The application of biocides in building materials has become a prevalent practice to mitigate the growth of microorganisms such as algae, fungi, and bacteria on the façades. These can leach out from the material and reach the nearby soil environment. This study aimed to characterize the effect of façade eluates generated within different leaching experiments on total and metabolic active soil microbial community composition and functions.

Biosurfactant-mediated transport of tetracycline antibiotics in saturated porous media: Combined effects of the chemical properties of contaminants and solution chemistry conditions.

The mobility of tetracycline antibiotics (TCs) in saturated aquifers is possibly affected by the presence of biosurfactants, which are widespread in the aquatic/soil environments. This study investigated the mobility characteristics of various tetracyclines-specifically tetracycline (TC), oxytetracycline (OTC), and chlortetracycline (CTC)-within quartz sand columns in the presence of rhamnolipid, a common biosurfactant. Exogenous rhamnolipid significantly inhibited the transport of the three TCs over the pH range of 5.

Consequences of Local Conspecific Density Effects for Plant Diversity and Community Dynamics.

Conspecific density dependence (CDD) in plant populations is widespread, most likely caused by local-scale biotic interactions, and has potentially important implications for biodiversity, community composition, and ecosystem processes. However, progress in this important area of ecology has been hindered by differing viewpoints on CDD across subfields in ecology, lack of synthesis across CDD-related frameworks, and misunderstandings about how empirical measurements of local CDD fit within the context of broader ecological theories on community assembly and diversity maintenance. Here, we propose a conceptual synthesis of local-scale CDD and its causes, including species-specific antagonistic and mutualistic interactions.

[Characterization of the Ecological Niche and Interspecific Connectivity of Plankton in Baiyangdian Lake by Combining Ecological Networks].

To understand the structure of the plankton community and the ecological niche characteristics of their dominant species, sampling surveys of plankton were conducted in Baiyangdian Lake in the spring （March）, summer （July）, and autumn （September） of 2022. The changes in the plankton community during the three seasons were analyzed by constructing ecological network diagrams, non-metric multidimensional scaling analysis （NMDS）, and the ecological niche width. The niche overlap of zooplankton dominant species was evaluated by the improved Levins' formula and Petraitis' index.

Mechanisms determining the multi-diversity of carrion visiting species along a gradient of carrion body mass.

Resource availability and habitat heterogeneity are essential drivers of biodiversity, but their individual roles often remain unclear since both factors are often correlated. Here, we tested the more-individuals hypothesis (MIH) and the habitat-heterogeneity hypothesis (HHH) for bacteria, fungi, dipterans, coleopterans, birds, and mammals on 100 experimentally exposed carcasses ranging by three orders of magnitude in body mass. At the level of each carcass we found marginal or significant support for the MIH for bacteria, fungi, and beetles in spring and significant support for fungi, dipterans, and mammals in summer.

Speciation happens in company - not in isolation.

Oceanic islands are considered the classic arenas for allopatric speciation and adaptive radiation. Established concepts of speciation and endemism are strongly focused on spatial and temporal scales. However, biotic interactions and ecological drivers, although widely recognized as playing a role, still need to be integrated into our understanding of these processes.

How plastic litter sunk by biofouling recovers buoyancy - The role of benthic predation.

Estimates suggest that the amount of plastic litter discarded in the ocean is several times greater than what remains floating at the sea surface, raising questions about the fate of this marine debris. Fouling-induced sinking of plastic litter is one of the proposed mechanisms responsible for this mass difference. While some of this 'missing' plastic mass may be explained by the effects of fouling, it has also been hypothesized that sinking litter may return to the surface after benthic organisms consume the biofouling.

Ecological drivers of carrion beetle (Staphylinidae: Silphinae) diversity on small to large mammals.

Silphinae (Staphylinidae; carrion beetles) are important contributors to the efficient decomposition and recycling of carrion necromass. Their community composition is important for the provision of this ecosystem function and can be affected by abiotic and biotic factors. However, investigations are lacking on the effects of carrion characteristics on Silphinae diversity.

Accurate Long-Read RNA Sequencing Analysis Reveals the Key Pathways and Candidate Genes under Drought Stress in the Seed Germination Stage in Faba Bean.

Faba bean is an important pulse. It provides proteins for the human diet and is used in industrial foodstuffs, such as flours. Drought stress severely reduces the yield of faba bean, and this can be efficiently overcome through the identification and application of key genes in response to drought.

Generation of Two-Line Restorer Line with Low Chalkiness Using Knockout of through CRISPR/Cas9 Editing.

Chalkiness is an important grain quality trait in rice. , encoding a vacuolar H-translocating pyrophosphatase, is a major gene affecting both the percentage of grains with chalkiness (PGWC) and chalkiness degree (DEC) in rice. Reducing its expression can decrease both PGEC and DEC.

[Phytic Acid Modification Enhanced Cadmium Sorption and Immobilization of Sludge-based Hydrochar].

Phytic acid-assisted sludge hydrothermal carbonization was employed to synthesize phytic acid-modified hydrochar via a one-step method. The surface morphology, pore structure, elemental composition, functional groups, and thermal stability of the phytic acid-modified hydrochar were characterized. Sorption kinetics and isotherm experiments were conducted to investigate the effects of humic acid, temperature, and pH on the sorption process of cadmium （Cd） onto the phytic acid-modified hydrochar.