Normal and diseased personal eye modeling using age-appropriate lens parameters.

Personalized eye modeling of normal and diseased eye conditions is attractive due to the recent availability of detailed ocular measurements in clinic environments and the promise of its medical and industrial applications. In the customized modeling, the optical properties of the crystalline lens including the gradient refractive index, the lens bio-geometry and orientation are typically assigned with average lens parameters from literature since typically they are not clinically available. Although, through the optical optimization by assigning lens parameters as variables, the clinical measured wavefront aberration can be achieved, the optimized lens biometry and orientation often end up at edges of the statistical distribution.

Silica coating of polymer nanowires produced via nanoimprint lithography from femtosecond laser machined templates.

In this paper we report on the fabrication of regular arrays of silica nanoneedles by deposition of a thin layer of silica on patterned arrays of polymer nanowires (or polymer nanohair). An array of high-aspect-ratio nanoscale diameter holes of depths greater than 10 µm was produced at the surface of a fused silica wafer by an amplified femtosecond laser system operated in single-pulse mode. Cellulose acetate (CA) film was imprinted into the nanoholes and peeled off to form a patterned array of standing CA nanowires, a negative replica of the laser machined nanoholes.

Femtosecond laser machined microfluidic devices for imaging of cells during chemotaxis.

Microfluidic devices designed for chemotaxis assays were fabricated on fused silica substrates using femtosecond laser micromachining. These devices have built-in chemical concentration gradient forming structures and are ideally suited for establishing passive diffusion gradients over extended periods of time. Multiple gradient forming structures, with identical or distinct gradient forming characteristics, can be integrated into a single device, and migrating cells can be directly observed using an inverted microscope.

Computation of AlO B2Σ+ → X2Σ+ emission spectra.

Application of molecular spectroscopy to analytical chemistry usually requires accurate description of the particular transition of interest. In this communication we describe the creation of a list of spectral lines. Following the introduction and definition of the line strength, we present a recipe for computation of diatomic-line-strengths, including the Hönl-London factor and electric dipole line strength for each spectral line.

A path to soluble molecularly imprinted polymers.

Molecular imprinting is a technique for making a selective binding site for a specific chemical. The technique involves building a polymeric scaffold of molecular complements containing the target molecule. Subsequent removal of the target leaves a cavity with a structural "memory" of the target.

Reversible Control of Third-Order Optical Nonlinearity of DNA Decorated Carbon Nanotube Hybrids.

Positive and negative third-order optical nonlinearities have been investigated in single-stranded DNA wrapped semiconducting single-walled carbon nanotubes. It is found that the redox reactions of hydrogen peroxide can reverse the sign of the third-order nonlinearity. The observation proves that the lowest unoccupied molecular orbital has a lower density of electronic states than that of the highest occupied molecular orbital.

Simulation of single-molecule trapping in a nanochannel.

The detection and trapping of single fluorescent molecules in solution within a nanochannel is studied using numerical simulations. As optical forces are insufficient for trapping molecules much smaller than the optical wavelength, a means for sensing a molecule's position along the nanochannel and adjusting electrokinetic motion to compensate diffusion is assessed. Fluorescence excitation is provided by two adjacently focused laser beams containing temporally interleaved laser pulses.

Engineering the collected field for single-molecule orientation determination.

We theoretically investigate the use of spatial light modulators (SLMs) for transformation of the collected fluorescence field in a high numerical aperture confocal microscope, for improved molecular orientation determination in single-molecule spectroscopy. The electric vector field in the back aperture of the microscope objective is calculated using the Weyl representation and taking into account components emitted at angles above the critical angle of the coverglass-immersion fluid interface. The coherently imaged fluorescence undergoes spatially-dependent phase and polarization transformation by the SLMs, before it passes to a polarization beamsplitter, and is subsequently focused onto two pinholes and single-photon detectors.

How keratoconus influences optical performance of the eye.

Using a statistical description of keratoconus (KC) topography, schematic eye models of various KC conditions are constructed to study their optical influence on visual performance. The cone shape, protruding height and extent, and distance from the visual zone are independently investigated with the three-dimensional optical eye-modeling and ray-tracing techniques. The subsequent spherical equivalent (SE), cylinder, together with residual high-order ocular aberrations, are examined and related to each separated variable.

Temperature distribution in dental tissue after interaction with femtosecond laser pulses.

Algebraic and numerical solutions are presented of the temperature rise in dental tissue due to interaction with ultrashort optical radiation. Results of the studies with femtosecond laser pulses show agreement between theory and experiment. A temperature rise of typically 5 K is found for a 40 millisecond train of 7 nJ, 70 fs laser pulses at a repetition rate of 80 MHz.

Single-molecule detection with axial flow into a micrometer-sized capillary.

We characterize a new geometry for single-molecule detection with flow for use with a submilliliter drop of sample on an inverted confocal microscope. The solution is sucked into a glass capillary positioned above the ellipsoidal confocal volume so that molecules traverse the longest axis of the ellipsoid for greatest photon yield. Decreased spacing between the capillary tip and laser focus gives increased flow speed, as measured by fluorescence correlation spectroscopy, but also increased background from capillary autofluorescence.

Accounting for triplet and saturation effects in FCS measurements.

Fluorescence correlation spectroscopy (FCS) is an increasingly important tool for determining low concentrations and dynamics of molecules in solution. Oftentimes triplet transitions give rise to fast blinking effects, which are accounted for by including an exponential term in the fitting of the autocorrelation function (ACF). In such cases, concomitant saturation effects also modify the amplitude and shape of the remaining parts of the ACF.

Data reduction methods for application of fluorescence correlation spectroscopy to pharmaceutical drug discovery.

Fluorescence methods are commonly used in pharmaceutical drug discovery to assay the binding of drug-like compounds to signaling proteins and other bio-particles. For binding studies of non-fluorescent compounds, a competitive format may be used in which the binding of the compound results in displacement of another fluorescently labeled ligand. Highly-sensitive measurements within nano-liter sized open probe volumes can be accomplished using a confocal epi-illumination geometry and thus key tools for such drug-binding studies include fluorescence correlation spectroscopy (FCS) and its related techniques.

Measurement and analysis of atomic and diatomic carbon spectra from laser ablation of graphite.

Spectra from plasma produced by laser-induced breakdown of graphite were recorded and analyzed to increase our understanding of the way in which carbon nanoparticles are created during Nd:YAG laser ablation of graphite. The effects of various buffer gases were studied. Electron density and temperature were determined from spectra of the first and second ions of atomic carbon.

Balmer series Hbeta measurements in a laser-induced hydrogen plasma.

Stark-broadened emission profiles of the Balmer series Hbeta lines are measured subsequent to nanosecond laser-induced optical breakdown in gaseous hydrogen. Electron number densities are found from time-resolved spectra from Hbeta emissions to be in the range 10(15)-10(18) cm(-3). These results are compared with Halpha measurements for which number densities as high as 10(19) cm(-3) are determined from Stark widths and Stark shifts.

Measurement and analysis of OH emission spectra following laser-induced optical breakdown in air.

The measured emission spectra of the OH radical subsequent to laser-induced optical breakdown in air are analyzed to infer spectroscopic temperature and species number density. Emissions from the UV A2sigma+ --> X2IIi transition dominate the spectra in the wavelength range of 306-322 nm and for time delays from the optical breakdown of 30-300 micros. Contributions from other species to the recorded OH emission spectra were also investigated for spectroscopic temperature measurements in the range of 2000-6000 K and for OH number densities in the range of 10(14) - 2 x 10(16) cm(-3).