1,174 results match your criteria: "Center for Information Technology[Affiliation]"

How to evaluate the accuracy of quantitative trait prediction is crucial to choose the best model among several possible choices in plant breeding. Pearson's correlation coefficient (PCC), serving as a metric for quantifying the strength of the linear association between two variables, is widely used to evaluate the accuracy of the quantitative trait prediction models, and generally performs well in most circumstances. However, PCC may not always offer a comprehensive view of predictive accuracy, especially in cases involving nonlinear relationships or complex dependencies in machine learning-based methods.

View Article and Find Full Text PDF

Automated fibril structure calculations in Xplor-NIH.

Structure

December 2024

Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA; National Magnetic Resonance Facility at Madison, University of Wisconsin-Madison, Madison, WI 53706, USA. Electronic address:

Article Synopsis
  • Amyloid fibrils are protein structures associated with neurodegenerative diseases, and they are important for creating specific ligands for medical imaging and treatment.
  • Solid-state NMR (SSNMR) is a technique used to analyze these fibrils, but traditional methods require a lot of manual data analysis, which slows down the process.
  • The study presents a new automated method using probabilistic assignment and symmetry in software, which successfully determined the structure of an α-synuclein fibril linked to Parkinson's, significantly reducing the time and manual effort needed for structure analysis.
View Article and Find Full Text PDF

We tested a hypothesis that misinformation exploits outrage to spread online, examining generalizability across multiple platforms, time periods, and classifications of misinformation. Outrage is highly engaging and need not be accurate to achieve its communicative goals, making it an attractive signal to embed in misinformation. In eight studies that used US data from Facebook (1,063,298 links) and Twitter (44,529 tweets, 24,007 users) and two behavioral experiments (1475 participants), we show that (i) misinformation sources evoke more outrage than do trustworthy sources; (ii) outrage facilitates the sharing of misinformation at least as strongly as sharing of trustworthy news; and (iii) users are more willing to share outrage-evoking misinformation without reading it first.

View Article and Find Full Text PDF

Walnut blight, caused by Xanthomonas arboricola pv. juglandis (Xaj), occurs worldwide in almost all areas where the Persian walnut (Juglans regia) is grown, causing significant reductions in nut yield via defoliation and fruit drop. The disease control relies on the calendar-based, repeated use of chemical bactericides, negatively impacting economic and environmental sustainability and potentially inducing Xaj resistance to chemicals.

View Article and Find Full Text PDF

Tea standard samples are the benchmark for tea product quality control. Understanding the inherent differences in Chinese national standards for Lapsang Souchong black tea of different grades is crucial for the scientific development of tea standardization work. In this study, Lapsang Souchong black tea of different grades that meet Chinese national standards was selected as the research object.

View Article and Find Full Text PDF
Article Synopsis
  • Cancer prognosis needs precision to identify high-risk patients, and our study uses deep learning to simplify complex medical data into useful feature vectors for better predictions across different cancer types.)
  • We developed a multi-task bimodal neural network that combines RNA sequencing and clinical data from various cancers, showing significant improvement in prognosis prediction, especially for Colon Adenocarcinoma with substantial increases in relevant metrics.)
  • Our approach demonstrates that integrating data from multiple cancer types can enhance predictive accuracy and offers a promising step toward using advanced techniques for personalized medicine in cancer treatment.)
View Article and Find Full Text PDF

Time course of visual attention in rats by atomic magnetometer.

PLoS One

October 2024

Laboratory of Quantum Precision Measurement of Zhejiang Province, Center for Optics and Optoelectronics Research, Collaborative Innovation Center for Information Technology in Biological and Medical Physics, College of Science, Zhejiang University of Technology, Hangzhou, China.

Atomic magnetometer (AM) is utilized to non-invasively detect event-related magnetic fields (ERMFs) evoked by visual stimuli in rats. The aim of this study was to investigate the relationship between N2-like amplitude and visual attention. To achieve this, we combined the AM with a visual stimulation system and employed the passive single-stimulus paradigm.

View Article and Find Full Text PDF

Ginseng is considered as a beneficial herbal remedy and over recent years its efficacy and safety have been verified in clinical therapy. There are two typical species of ginseng including Asian and American ginseng. The varieties of both species have been applied for commercialized materials in different stages of processing from raw to processed products.

View Article and Find Full Text PDF
Article Synopsis
  • Frozen shoulder (FS) causes pain and limited motion in the shoulder, and traditional assessment methods can be subjective.
  • This study introduces an inertial measurement unit (IMU)-based system that uses machine learning and deep learning to objectively identify shoulder tasks of both FS patients and healthy individuals.
  • The findings indicate that deep learning models (like convolutional neural networks) achieved high identification accuracy (88.26%) and that wrist features were more effective for FS identification than arm features.
View Article and Find Full Text PDF

Application of Machine Learning in the Diagnosis of Early Gastric Cancer Using the Kyoto Classification Score and Clinical Features Collected from Medical Consultations.

Bioengineering (Basel)

September 2024

Department of Gastroenterology, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing 100730, China.

The early detection accuracy of early gastric cancer (EGC) determines the choice of the optimal treatment strategy and the related medical expenses. We aimed to develop a simple, affordable, and time-saving diagnostic model using six machine learning (ML) algorithms for the diagnosis of EGC. It is based on the endoscopy-based Kyoto classification score obtained after the completion of endoscopy and other clinical features obtained after medical consultation.

View Article and Find Full Text PDF

Germany's healthcare sector suffers from a shortage of nursing staff, and robotic solutions are being explored as a means to provide quality care. While many robotic systems have already been established in various medical fields (e.g.

View Article and Find Full Text PDF
Article Synopsis
  • Current studies on electronic health records (EHR) using machine learning highlight the need for better patient representation to identify new medical patterns.
  • A novel unsupervised method was developed to embed high-dimensional EHR data and successfully predicts disease events and assesses patient diversity in complex diseases.
  • Validated on extensive datasets, the approach revealed distinct comorbidity patterns and variations in disease outcomes, demonstrating the effectiveness of representation learning in EHR analysis.
View Article and Find Full Text PDF
Article Synopsis
  • Various policy proposals can impact how innovation develops and thrives in different ways.
  • Some policies might favor certain industries or technologies over others, leading to uneven growth.
  • Understanding these effects is crucial for creating balanced policies that support a healthy innovation ecosystem across the board.
View Article and Find Full Text PDF

NIGMS Sandbox: a learning platform toward democratizing cloud computing for biomedical research.

Brief Bioinform

July 2024

National Institute of General Medical Sciences, National Institutes of Health, 9000 Rockville Pike, Bethesda, Marylnd 20892, USA.

Biomedical data are growing exponentially in both volume and levels of complexity, due to the rapid advancement of technologies and research methodologies. Analyzing these large datasets, referred to collectively as "big data," has become an integral component of research that guides experimentation-driven discovery and a new engine of discovery itself as it uncovers previously unknown connections through mining of existing data. To fully realize the potential of big data, biomedical researchers need access to high-performance-computing (HPC) resources.

View Article and Find Full Text PDF

Background: The environment shapes health behaviors and outcomes. Studies exploring this influence have been limited to research groups with the geographic information systems expertise required to develop built and social environment measures (eg, groups that include a researcher with geographic information system expertise).

Objective: The goal of this study was to develop an open-source, user-friendly, and privacy-preserving tool for conveniently linking built, social, and natural environmental variables to study participant addresses.

View Article and Find Full Text PDF

Current state of data stewardship tools in life science.

Front Big Data

September 2024

Bonn-Aachen International Center for Information Technology (B-IT), University of Bonn, Bonn, Germany.

Article Synopsis
  • Effective data stewardship is crucial for promoting scientific research and innovation in today's data-driven environment.
  • The article reviews key tools and frameworks that support modern data stewardship practices.
  • Over 300 tools were evaluated for their usefulness, relevance, and application in the life sciences sector.
View Article and Find Full Text PDF

Serum-deprivation response of ARPE-19 cells; expression patterns relevant to age-related macular degeneration.

PLoS One

September 2024

Molecular Structure and Functional Genomics Section, National Eye Institute, National Institutes of Health, Bethesda, Maryland, United States of America.

ARPE-19 cells are derived from adult human retinal pigment epithelium (RPE). The response of these cells to the stress of serum deprivation mimics some important processes relevant to age-related macular degeneration (AMD). Here we extend the characterization of this response using RNASeq and EGSEA gene set analysis of ARPE-19 cells over nine days of serum deprivation.

View Article and Find Full Text PDF

Face swapping in seizure videos for patient deidentification.

Epilepsy Res

November 2024

Department of Neurology, Neurological Institute, Taipei Veterans General Hospital, Taiwan; College of Medicine, National Yang Ming Chiao Tung University College of Medicine, Taiwan; Brain Research Center, National Yang Ming Chiao Tung University, Taiwan. Electronic address:

Article Synopsis
  • The study tested various AI face-swapping models on videos of epileptic seizures to maintain patient privacy while preserving important clinical details.
  • Three open-source models were used to replace original faces in seizure videos, with evaluations conducted by both AI metrics and expert clinicians.
  • Results showed that all models were effective at concealing original identities, but the GHOST model was slightly better at preserving clinically relevant details, suggesting potential for enhancing educational resources while protecting patients' identities.
View Article and Find Full Text PDF

Collective intelligence underpins the success of groups, organizations, markets and societies. Through distributed cognition and coordination, collectives can achieve outcomes that exceed the capabilities of individuals-even experts-resulting in improved accuracy and novel capabilities. Often, collective intelligence is supported by information technology, such as online prediction markets that elicit the 'wisdom of crowds', online forums that structure collective deliberation or digital platforms that crowdsource knowledge from the public.

View Article and Find Full Text PDF

Objectives: Effectiveness of nirmatrelvir/ritonavir (NR) in kidney transplant recipients (KTRs) infected COVID-19 for more than 5 days has not been evaluated.

Methods: In this multicenter retrospective study, 85 KTRs with COVID-19 were enrolled, including 50 moderate, 21 severe, and 14 critical patients.

Results: The median time from onset to starting NR treatment was 14 (IQR, 11-19) days.

View Article and Find Full Text PDF

Theories of visual working memory have seen significant progress through the use of continuous reproduction tasks. However, these tasks have mainly focused on studying visual features, with limited examples existing in the auditory domain. Therefore, it is unknown to what extent newly developed memory models reflect domain-general limitations or are specific to the visual domain.

View Article and Find Full Text PDF

Using machine learning to predict bacteremia in urgent care patients on the basis of triage data and laboratory results.

Am J Emerg Med

November 2024

Department of Computer Science and Information Engineering, National Cheng Kung University, Tainan 70101, Taiwan; Department of Computer Science and Information Engineering, National Chi Nan University, Nantou 545301, Taiwan; Institute of Manufacturing Information and Systems, National Cheng Kung University. Tainan. 70101, Taiwan; Institute of information Science, Academia Sinica, Taipei, 115, Taiwan; Research Center for Information Technology Innovation. Academia Sinica, Taipei, 115. Taiwan. Electronic address:

Background: Despite advancements in antimicrobial therapies, bacteremia remains a life-threatening condition. Appropriate antimicrobials must be promptly administered to ensure patient survival. However, diagnosing bacteremia based on blood cultures is time-consuming and not something emergency department (ED) personnel are routinely trained to do.

View Article and Find Full Text PDF

Individual health data is crucial for scientific advancements, particularly in developing Artificial Intelligence (AI); however, sharing real patient information is often restricted due to privacy concerns. A promising solution to this challenge is synthetic data generation. This technique creates entirely new datasets that mimic the statistical properties of real data, while preserving confidential patient information.

View Article and Find Full Text PDF

Blockchain-based proxy re-encryption access control method for biological risk privacy protection of agricultural products.

Sci Rep

August 2024

National Engineering Laboratory for Agri-product Quality Traceability, Beijing, 100097, China.

In today's globalized agricultural system, information leakage of agricultural biological risk factors can lead to business risks and public panic, jeopardizing corporate reputation. To solve the above problems, this study constructs a blockchain network for agricultural product biological risk traceability based on agricultural product biological risk factor data to achieve traceability of biological risk traceability data of agricultural product supply chain to meet the sustainability challenges. To guarantee the secure and flexible sharing of agricultural product biological risk privacy information and limit the scope of privacy information dissemination, the blockchain-based proxy re-encryption access control method (BBPR-AC) is designed.

View Article and Find Full Text PDF

Predicting the oil content of individual corn kernels using hyperspectral imaging and ML offers the advantages of being rapid and non-destructive. However, traditional methods rely on expert experience for setting parameters. In response to these limitations, this study has designed an innovative multi-stage grid search technique, tailored to the characteristics of spectral data.

View Article and Find Full Text PDF