158 results match your criteria: "Center for Biodiversity and Conservation[Affiliation]"

Ecological and anthropogenic effects on the genomic diversity of lemurs in Madagascar.

Nat Ecol Evol

January 2025

IBE, Institute of Evolutionary Biology (UPF-CSIC), Department of Medicine and Life Sciences, Universitat Pompeu Fabra, Barcelona, Spain.

Ecological variation and anthropogenic landscape modification have had key roles in the diversification and extinction of mammals in Madagascar. Lemurs represent a radiation with more than 100 species, constituting roughly one-fifth of the primate order. Almost all species of lemurs are threatened with extinction, but little is known about their genetic diversity and demographic history.

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Creating software tools that address the needs of a wide range of decision-makers requires the inclusion of differing perspectives throughout the development process. Software tools for biodiversity conservation often fall short in this regard, partly because broad decision-maker needs may exceed the toolkits of single research groups or even institutions. We show that participatory, collaborative codesign enhances the utility of software tools for better decision-making in biodiversity conservation planning, as demonstrated by our experiences developing a set of integrated tools in Colombia.

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Insight Into Body Size Evolution in Aves: Based on Some Body Size-Related Genes.

Integr Zool

December 2024

Institute of Eastern-Himalaya Biodiversity Research, Dali University, Dali, Yunnan, China.

Article Synopsis
  • Birds vary greatly in size, making them key for studying how evolution adapts traits like body size, but the genetic factors involved are still not well understood.
  • This study examined 15 genes linked to body size in birds, showing notable adaptive evolution in these genes across different bird lineages, especially highlighting the IGF2BP1 gene's connection to larger body sizes.
  • The research uncovered distinct evolutionary patterns and convergent evolution in genes associated with body size, providing new insights into the genetic mechanisms driving size adaptations in birds.
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Analyzing sorbitol biosynthesis using a metabolic network flux model of a lichenized strain of the green microalga .

Microbiol Spectr

January 2025

Australian National Herbarium, National Research Collections Australia, NCMI, CSIRO, Canberra, Australia.

a unicellular terrestrial microalga found either free-living or in association with lichenized fungi, protects itself from desiccation by synthesizing and accumulating low-molecular-weight carbohydrates such as sorbitol. The metabolism of this algal species and the interplay of sorbitol biosynthesis with its growth, light absorption, and carbon dioxide fixation are poorly understood. Here, we used a recently available genome assembly for to develop a metabolic flux model and analyze the alga's metabolic capabilities, particularly, for sorbitol biosynthesis.

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Community perceptions of invasive species and environmental management in a US island territory.

Conserv Biol

December 2024

Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, Virginia, USA.

Environmental managers struggle with communicating accurate and relevant information and with gaining trust from the communities they serve, problems that are especially pronounced in minority and colonized communities. An important step in developing successful management strategies is partnering directly with the communities involved, but community perceptions are rarely surveyed thoroughly when developing these strategies. We held discussions with 73 people across 22 small groups about their perceptions of environmental issues, with a focus on invasive species, on the island of Guåhan (Guam), a US island territory with a long and continued history of colonization by Western countries.

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Natural Language Processing Methods for the Study of Protein-Ligand Interactions.

ArXiv

October 2024

Department of Biology and Center for Biodiversity and Conservation Research, University of Mississippi, University, MS.

Article Synopsis
  • NLP is transforming how computers analyze human languages and is now being applied to study protein-ligand interactions, crucial for drug discovery.
  • * Techniques like LSTM networks and transformers are utilized to process diverse protein and ligand data for predicting these interactions.
  • * The review points out challenges, including limited negative data and model interpretability, and calls for better data quality and collaboration to improve predictions.*
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A broader view of aquaculture.

Sci Adv

October 2024

Deputy Editor, Science Advances, Center for Biodiversity and Conservation, American Museum of Natural History, New York, NY, USA.

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We describe the geographical variation in tree species composition across Amazonian forests and show how environmental conditions are associated with species turnover. Our analyses are based on 2023 forest inventory plots (1 ha) that provide abundance data for a total of 5188 tree species. Within-plot species composition reflected both local environmental conditions (especially soil nutrients and hydrology) and geographical regions.

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pH and buffering capacity: Fundamental yet underappreciated drivers of algal-bacterial interactions.

Cell Syst

September 2024

Department of Biology, University of Mississippi, University, MS 38677, USA; Center for Biodiversity and Conservation Research, University of Mississippi, University, MS 38677, USA. Electronic address:

Article Synopsis
  • Studying microbial interactions in natural habitats is challenging due to their complex nature.
  • A recent study used advanced microfluidics to analyze over 100,000 cultures of algae and bacteria in various conditions.
  • The findings reveal that environmental pH and buffering capacity significantly influence how phototrophs (like algae) and heterotrophs (like bacteria) interact.
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Background: Nature-based interventions (NbIs) for climate change mitigation include a diverse set of interventions aimed at conserving, restoring, and/or managing natural and modified ecosystems to improve their ability to store and sequester carbon and avoid greenhouse gas (GHG) emissions. Recent projections estimate that terrestrial NbIs can lead to more than one-third of the climate change mitigation necessary to meet the Paris Climate Agreement by 2030. Further, these interventions can provide co-benefits in the form of social and ecological outcomes.

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Article Synopsis
  • This study examines how human activities and climate factors affect biodiversity in river ecosystems, specifically looking at various measures of diversity within macroinvertebrate communities across different watersheds in China.
  • Findings indicate significant declines in alpha diversity in less diverse environments, showing a loss of unique species, while beta diversity varies depending on microhabitat conditions.
  • Key drivers of these biodiversity patterns include nutrient levels, organic matter, and water quality, emphasizing the need for better conservation strategies that address environmental extremes and promote habitat diversity.
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Linking watershed formation with the phylogenetic distribution of a soil microscopic fungus in Yunnan Province, China.

BMC Microbiol

August 2024

Institute of Eastern-Himalaya Biodiversity Research, Dali University, Hongsheng Rd. no. 2, Dali, 671003, Yunnan, China.

Article Synopsis
  • Phylogeographic studies have primarily focused on plants, overlooking the distribution patterns of soil microbes, prompting this research on the nematode-trapping fungus Arthrobotrys oligospora in a tectonically active area of the Qinghai-Tibetan Plateau.
  • The study identified five distinct genetic clusters of the fungus correlating with major watersheds, indicating that historical river connections significantly influenced the distribution of its genetic diversity.
  • The findings highlight the importance of historical geological events in shaping microbial biogeography, suggesting that watershed boundaries can serve as effective analytical units for studying regional biodiversity patterns.
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from Dali Bai Autonomous Prefecture, Yunnan Province, China, is described based on chorionic structure, nymph, and winged stages. The new species is closely related to (Kang & Yang, 1995), but it can be distinguished in the male imago stage by its mesonotum and penes morphology, coloration, and the forking point of the stem of MA+Rs on the forewing; in the nymph stage, it can be distinguished by the length of the posterolateral projections of abdominal segment IX and the setation of the abdominal terga. Compared to other congeners, nymphs and male imagoes of the new species and share several morphological characteristics, such as a larger body, mesothorax with medially notched anterolateral projections, forefemur without a subapical band of transverse spines of the nymphs, the area between C, Sc and R1 of the forewings distinctly pigmented, and an apical sclerite on the ventral face of the penes of the male imagoes, supporting the proposition of a new species complex, the complex.

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Globally, human house types are diverse, varying in shape, size, roof type, building materials, arrangement, decoration and many other features. Here we offer the first rigorous, global evaluation of the factors that influence the construction of traditional (vernacular) houses. We apply macroecological approaches to analyse data describing house features from 1900 to 1950 across 1000 societies.

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Article Synopsis
  • The original publication discusses the main themes and findings of a specific research study.
  • It highlights the methodology used and the significance of the results in the context of the relevant field.
  • Key conclusions and implications for future research or practice are also presented, providing a comprehensive overview of the subject matter.
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Let's celebrate Earth Day as the Age of Open Science.

Sci Adv

April 2024

Shahid Naeem, Deputy Editor, Science Advances, Department of Ecology, Evolution, and Environmental Biology (E3B), Columbia University, 1200 Amsterdam Ave, 10th Floor Schermerhorn Extension, MC5557, New York, NY, 10027, USA. Email:

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Fallback foods (FBF), categorized into staple and filler types, are suboptimal food sources chosen by animals in response to a scarcity of preferred food items during specific periods. Using lichens as FBF by Yunnan snub-nosed monkeys () represents a distinctive ecological adaptation and evolutionary development within nonhuman primates. This study delves into the annual dietary choices of the species to address issues, elucidate the nutritional value, and understand the ecological significance of lichens for this primate species, which resides at the highest altitudes and experiences the coldest weather among global primates.

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Article Synopsis
  • Amazonia's floodplain system is the largest and most biodiverse, but our understanding of its forest species and their unique roles is still limited, especially as changing flood patterns impact these communities.
  • About one-sixth of the tree diversity in Amazonia is specifically adapted to live in floodplain environments, indicating a significant ecological specialization within these forests.
  • The study emphasizes that the unique composition of floodplain forests is influenced by regional flooding patterns, highlighting the necessity of maintaining overall hydrological health to ensure the survival of Amazon's tree diversity and its essential ecosystem functions.
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This study explores the impact of anthropogenic land use changes on the macroinvertebrate community structure in the streams of the Cangshan Mountains. Through field collections of macroinvertebrates, measurement of water environments, and delineation of riparian zone land use in eight streams, we analyzed the relationship between land use types, stream water environments, and macroinvertebrate diversities. The results demonstrate urban land use type and water temperature are the key environmental factors driving the differences in macroinvertebrate communities up-, mid-, and downstream.

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The Genus Dysoxylum (Meliaceae) consists of approximately 80 species that are abundant in structurally diverse triterpenoids. The present study focused on isolating new triterpenoids from the bark of Dysoxylum malabaricum, one of the predominant species of Dysoxylum present in India. The methanol-dichloromethane bark extract was subjected to LCMS profiling followed by silica gel column chromatography and HPLC analysis to target new compounds.

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Improving models of species' distributions is essential for conservation, especially in light of global change. Species distribution models (SDMs) often rely on mean environmental conditions, yet species distributions are also a function of environmental heterogeneity and filtering acting at multiple spatial scales. Geodiversity, which we define as the variation of abiotic features and processes of Earth's entire geosphere (inclusive of climate), has potential to improve SDMs and conservation assessments, as they capture multiple abiotic dimensions of species niches, however they have not been sufficiently tested in SDMs.

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Whole community shotgun metagenomes of two biological soil crust types from the Mojave Desert.

Microbiol Resour Announc

March 2024

Department of Biology and Center for Biodiversity and Conservation Research, University of Mississippi, University, Mississippi, USA.

We present six whole community shotgun metagenomic sequencing data sets of two types of biological soil crusts sampled at the ecotone of the Mojave Desert and Colorado Desert in California. These data will help us understand the diversity and function of biocrust microbial communities, which are essential for desert ecosystems.

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Genetic evidence for algal auxin production in and its role in algal-bacterial mutualism.

iScience

January 2024

Departamento de Bioquímica y Biología Molecular. Campus de Rabanales y Campus Internacional de Excelencia Agroalimentario (CeiA3), Edificio Severo Ochoa, Universidad de Córdoba, 14071 Córdoba, Spain.

Interactions between algae and bacteria are ubiquitous and play fundamental roles in nutrient cycling and biomass production. Recent studies have shown that the plant auxin indole acetic acid (IAA) can mediate chemical crosstalk between algae and bacteria, resembling its role in plant-bacterial associations. Here, we report a mechanism for algal extracellular IAA production from L-tryptophan mediated by the enzyme L-amino acid oxidase (LAO1) in the model .

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