57 results match your criteria: "CSIRO Australian e-Health Research Centre.[Affiliation]"

Objective: This study aimed to assess the practicality and trustworthiness of explainable artificial intelligence (XAI) methods used for explaining clinical predictive models.

Methods: Two popular XAIs used for explaining clinical predictive models were evaluated based on their ability to generate domain-appropriate representations, impact clinical workflow, and consistency. Explanations were benchmarked against true clinical deterioration triggers recorded in the data system and agreement was quantified.

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Article Synopsis
  • Cranial sex estimation traditionally relies on visual assessments by forensic anthropologists, which can be biased and less accurate for diverse populations.
  • This study investigates a deep learning (DL) framework to improve sex estimation accuracy using 200 CT scans of Indonesian individuals, finding that the top DL model achieved 97% accuracy, significantly higher than the human observer's 82%.
  • The results suggest that DL models can effectively analyze cranial traits while considering overall size and shape, offering a valuable tool to enhance the reliability of sex estimation in forensic anthropology.
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Background: Computational signal preprocessing is a prerequisite for developing data-driven predictive models for clinical decision support. Thus, identifying the best practices that adhere to clinical principles is critical to ensure transparency and reproducibility to drive clinical adoption. It further fosters reproducible, ethical, and reliable conduct of studies.

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Background And Purpose: Magnetic resonance imaging (MRI)-to-computed tomography (CT) synthesis is essential in MRI-only radiotherapy workflows, particularly through deep learning techniques known for their accuracy. However, current supervised methods are limited to specific center's learnings and depend on registration precision. The aim of this study was to evaluate the accuracy of unsupervised and supervised approaches in the context of prostate MRI-to-CT generation for radiotherapy dose calculation.

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Uncertainty estimation using a 3D probabilistic U-Net for segmentation with small radiotherapy clinical trial datasets.

Comput Med Imaging Graph

September 2024

University of New South Wales, South Western Sydney Clinical School, Sydney, Australia; Ingham Institute for Applied Medical Research, Sydney, Australia; Liverpool and Macarthur Cancer Therapy Centres, Department of Radiation Oncology, Sydney, Australia; University of Sydney, Institute of Medical Physics, Sydney, Australia.

Background And Objectives: Bio-medical image segmentation models typically attempt to predict one segmentation that resembles a ground-truth structure as closely as possible. However, as medical images are not perfect representations of anatomy, obtaining this ground truth is not possible. A surrogate commonly used is to have multiple expert observers define the same structure for a dataset.

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Bradycardia is a commonly occurring condition in premature infants, often causing serious consequences and cardiovascular complications. Reliable and accurate detection of bradycardia events is pivotal for timely intervention and effective treatment. Excessive false alarms pose a critical problem in bradycardia event detection, eroding trust in machine learning (ML)-based clinical decision support tools designed for such detection.

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Cervical cancer is a common cancer in women globally, with treatment usually involving radiation therapy (RT). Accurate segmentation for the tumour site and organ-at-risks (OARs) could assist in the reduction of treatment side effects and improve treatment planning efficiency. Cervical cancer Magnetic Resonance Imaging (MRI) segmentation is challenging due to a limited amount of training data available and large inter- and intra- patient shape variation for OARs.

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A FHIR based platform for case-based instruction of health professions students has been developed and field tested. The system provides a non-technical case authoring tool; supports individual and team learning using digital virtual patients; and allows integration of SMART Apps into cases via its simulated EMR. Successful trials at the University of Queensland have led to adoption at the University of Melbourne.

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The lack of transparency and explainability hinders the clinical adoption of Machine learning (ML) algorithms. While explainable artificial intelligence (XAI) methods have been proposed, little research has focused on the agreement between these methods and expert clinical knowledge. This study applies current state-of-the-art explainability methods to clinical decision support algorithms developed for Electronic Medical Records (EMR) data to analyse the concordance between these factors and discusses causes for identified discrepancies from a clinical and technical perspective.

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Accurate identification of the QRS complex is critical to analyse heart rate variability (HRV), which is linked to various adverse outcomes in premature infants. Reliable and accurate extraction of HRV characteristics at a large scale in the neonatal context remains a challenge. In this paper, we investigate the capabilities of 15 state-of-the-art QRS complex detection implementations using two real-world preterm neonatal datasets.

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Addressing the need for accurate dose calculation in MRI-only radiotherapy, the generation of synthetic Computed Tomography (sCT) from MRI has emerged. Deep learning (DL) techniques, have shown promising results in achieving high sCT accuracies. However, existing sCT synthesis methods are often center-specific, posing a challenge to their generalizability.

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Radiation therapy is moving from CT based to MRI guided planning, particularly for soft tissue anatomy. An important requirement of this new workflow is the generation of synthetic-CT (sCT) from MRI to enable treatment dose calculations. Automatic methods to determine the acceptable range of CT Hounsfield Unit (HU) uncertainties to avoid dose distribution errors is thus a key step toward safe MRI-only radiotherapy.

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Clinical target volume delineation quality assurance for MRI-guided prostate radiotherapy using deep learning with uncertainty estimation.

Radiother Oncol

September 2023

Ingham Institute for Applied Medical Research, Sydney, New South Wales, Australia; South Western Clinical Campuses, University of New South Wales, Australia; Centre for Medical Radiation Physics, University of Wollongong, New South Wales, Australia; Institute of Medical Physics, The University of Sydney, New South Wales, Australia; Liverpool and Macarthur Cancer therapy Centres, Liverpool Hospital, New South Wales, Australia.

Article Synopsis
  • Previous studies on quality assurance (QA) for delineation have mainly focused on CT instead of MRI, highlighting the need for more MRI-specific research in prostate cancer treatment.
  • A new framework using deep learning (DL) for assessing clinical target volume (CTV) delineation was developed, employing a 3D ResUnet++ architecture and logistic regression for evaluation.
  • The framework demonstrated strong performance with an AUROC of 0.92 and faster processing times, signaling a significant improvement over older methods for MRI-guided prostate radiotherapy QA.
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Perioperative temperature monitoring for patient safety: A period prevalence study of five hospitals.

Int J Nurs Stud

July 2023

School of Nursing & Centre for Healthcare Transformation, Queensland University of Technology (QUT), Kelvin Grove, Queensland 4059, Australia; Metro North Hospital and Health Service, Herston, Queensland 4029, Australia.

Background: Monitoring body temperature is essential for safe perioperative care. Without patient monitoring during each surgical phase, alterations in core body temperature will not be recognised, prevented, or treated. Safe use of warming interventions also depends on monitoring.

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Automatic classification of distal radius fracture using a two-stage ensemble deep learning framework.

Phys Eng Sci Med

June 2023

School of Mechanical, Medical and Process Engineering, Faculty of Engineering, Queensland University of Technology, Brisbane, QLD, Australia.

Article Synopsis
  • * A two-stage deep learning framework was developed to automatically identify and classify DRFs from wrist X-rays using advanced models, mimicking how doctors examine images for abnormalities.
  • * The framework demonstrated promising results with 81% accuracy and a strong true positive rate, suggesting its potential for improving automatic fracture classification in clinical settings.
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Epidemiology and outcomes of early-onset AKI in COVID-19-related ARDS in comparison with non-COVID-19-related ARDS: insights from two prospective global cohort studies.

Crit Care

January 2023

Department of Anaesthesia and Intensive Care Medicine, School of Medicine, Clinical Sciences Institute, University of Galway, Galway University Hospital, Saolta Hospital Group, Galway, H91 YR71, Ireland.

Background: Acute kidney injury (AKI) is a frequent and severe complication of both COVID-19-related acute respiratory distress syndrome (ARDS) and non-COVID-19-related ARDS. The COVID-19 Critical Care Consortium (CCCC) has generated a global data set on the demographics, management and outcomes of critically ill COVID-19 patients. The LUNG-SAFE study was an international prospective cohort study of patients with severe respiratory failure, including ARDS, which pre-dated the pandemic.

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Purpose: The first aim was to generate and compare synthetic-CT (sCT) images using a conditional generative adversarial network (cGAN) method (Pix2Pix) for MRI-only prostate radiotherapy planning by testing several generators, loss functions, and hyper-parameters. The second aim was to compare the optimized Pix2Pix model with five other architectures (bulk-density, atlas-based, patch-based, U-Net, and GAN).

Methods: For 39 patients treated by VMAT for prostate cancer, T2-weighted MRI images were acquired in addition to CT images for treatment planning.

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Introduction: Acute appendicitis is the most common cause of acute abdominal pain presentations to the ED and common air ambulance transfer.

Aims: describe how linked data can be used to explore patients' journeys, referral pathways and request-to-activation responsiveness of patients' appendectomy outcomes (minor vs major complexity).

Methods: Data sources were linked: aeromedical, hospital and death.

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The Electronic Medical Record (EMR) provides an opportunity to manage patient care efficiently and accurately. This includes clinical decision support tools for the timely identification of adverse events or acute illnesses preceded by deterioration. This paper presents a machine learning-driven tool developed using real-time EMR data for identifying patients at high risk of reaching critical conditions that may demand immediate interventions.

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Introduction: Assessing the use of a radiation therapy (RT) planning MRI performed in the treatment position (pMRI) on target volume delineation and effect on organ at risk dose for oropharyngeal cancer patients planned with diagnostic MRI (dMRI) and CT scan.

Methods: Diagnostic MRI scans were acquired for 26 patients in a neutral patient position using a 3T scanner (dMRI). Subsequent pMRI scans were acquired on the same scanner with a flat couch top and the patient in their immobilisation mask.

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Article Synopsis
  • Volume delineation quality assurance (QA) is crucial in clinical trials to ensure precise protocol adherence, especially as it impacts patient outcomes; currently, this process is largely manual and resource-heavy.
  • This study proposes an automated delineation QA system for prostate MRI, utilizing 3D Unet variants that have been trained on a small dataset to generate benchmark delineations for clinical target volume (CTV) and organs-at-risk (OARs).
  • The results showed that the Unet with anatomical gates performed best, achieving high accuracy in identifying major correction needs, with significant potential to enhance the precision and reliability of radiotherapy treatment planning.
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Purpose: In radiotherapy, MRI is used for target volume and organs-at-risk delineation for its superior soft-tissue contrast as compared to CT imaging. However, MRI does not provide the electron density of tissue necessary for dose calculation. Several methods of synthetic-CT (sCT) generation from MRI data have been developed for radiotherapy dose calculation.

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Deformable image registration in radiation therapy.

J Med Radiat Sci

December 2020

Department of Radiation Oncology, Calvary Mater Newcastle Hospital, Newcastle, New South Wales, Australia.

Deformable image registration is an increasingly important method to account for soft tissue deformation between image acquisitions. This editorial discusses the clinical need and current status of deformable image registration.

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