57 results match your criteria: "CSIRO Australian e-Health Research Centre.[Affiliation]"
Health Informatics J
December 2024
The University of Queensland, Brisbane, QLD, Australia.
Objective: This study aimed to assess the practicality and trustworthiness of explainable artificial intelligence (XAI) methods used for explaining clinical predictive models.
Methods: Two popular XAIs used for explaining clinical predictive models were evaluated based on their ability to generate domain-appropriate representations, impact clinical workflow, and consistency. Explanations were benchmarked against true clinical deterioration triggers recorded in the data system and agreement was quantified.
Sci Rep
December 2024
Centre for Forensic Anthropology, School of Social Sciences, The University of Western Australia, Perth, Australia.
Interact J Med Res
August 2024
Commonwealth Scientific and Industrial Research Organisation (CSIRO) Australian e-Health Research Centre, Australia, Brisbane, Australia.
Background: Computational signal preprocessing is a prerequisite for developing data-driven predictive models for clinical decision support. Thus, identifying the best practices that adhere to clinical principles is critical to ensure transparency and reproducibility to drive clinical adoption. It further fosters reproducible, ethical, and reliable conduct of studies.
View Article and Find Full Text PDFPhys Imaging Radiat Oncol
July 2024
Univ. Rennes, CLCC Eugène Marquis, INSERM, LTSI - UMR 1099, F-35000 Rennes, France.
Background And Purpose: Magnetic resonance imaging (MRI)-to-computed tomography (CT) synthesis is essential in MRI-only radiotherapy workflows, particularly through deep learning techniques known for their accuracy. However, current supervised methods are limited to specific center's learnings and depend on registration precision. The aim of this study was to evaluate the accuracy of unsupervised and supervised approaches in the context of prostate MRI-to-CT generation for radiotherapy dose calculation.
View Article and Find Full Text PDFComput Med Imaging Graph
September 2024
University of New South Wales, South Western Sydney Clinical School, Sydney, Australia; Ingham Institute for Applied Medical Research, Sydney, Australia; Liverpool and Macarthur Cancer Therapy Centres, Department of Radiation Oncology, Sydney, Australia; University of Sydney, Institute of Medical Physics, Sydney, Australia.
Background And Objectives: Bio-medical image segmentation models typically attempt to predict one segmentation that resembles a ground-truth structure as closely as possible. However, as medical images are not perfect representations of anatomy, obtaining this ground truth is not possible. A surrogate commonly used is to have multiple expert observers define the same structure for a dataset.
View Article and Find Full Text PDFComput Biol Med
July 2024
CSIRO Australian e-Health Research Centre, Australia. Electronic address:
Bradycardia is a commonly occurring condition in premature infants, often causing serious consequences and cardiovascular complications. Reliable and accurate detection of bradycardia events is pivotal for timely intervention and effective treatment. Excessive false alarms pose a critical problem in bradycardia event detection, eroding trust in machine learning (ML)-based clinical decision support tools designed for such detection.
View Article and Find Full Text PDFPhys Eng Sci Med
September 2024
University of Queensland, Brisbane, Australia.
Cervical cancer is a common cancer in women globally, with treatment usually involving radiation therapy (RT). Accurate segmentation for the tumour site and organ-at-risks (OARs) could assist in the reduction of treatment side effects and improve treatment planning efficiency. Cervical cancer Magnetic Resonance Imaging (MRI) segmentation is challenging due to a limited amount of training data available and large inter- and intra- patient shape variation for OARs.
View Article and Find Full Text PDFStud Health Technol Inform
January 2024
A FHIR based platform for case-based instruction of health professions students has been developed and field tested. The system provides a non-technical case authoring tool; supports individual and team learning using digital virtual patients; and allows integration of SMART Apps into cases via its simulated EMR. Successful trials at the University of Queensland have led to adoption at the University of Melbourne.
View Article and Find Full Text PDFStud Health Technol Inform
January 2024
The University of Queensland, Brisbane, QLD, Australia.
The lack of transparency and explainability hinders the clinical adoption of Machine learning (ML) algorithms. While explainable artificial intelligence (XAI) methods have been proposed, little research has focused on the agreement between these methods and expert clinical knowledge. This study applies current state-of-the-art explainability methods to clinical decision support algorithms developed for Electronic Medical Records (EMR) data to analyse the concordance between these factors and discusses causes for identified discrepancies from a clinical and technical perspective.
View Article and Find Full Text PDFStud Health Technol Inform
January 2024
CSIRO Australian e-Health Research Centre, Australia.
Accurate identification of the QRS complex is critical to analyse heart rate variability (HRV), which is linked to various adverse outcomes in premature infants. Reliable and accurate extraction of HRV characteristics at a large scale in the neonatal context remains a challenge. In this paper, we investigate the capabilities of 15 state-of-the-art QRS complex detection implementations using two real-world preterm neonatal datasets.
View Article and Find Full Text PDFPhys Imaging Radiat Oncol
October 2023
Univ Rennes, CLCC Eugène Marquis, INSERM, LTSI - UMR 1099, F-35000 Rennes, France.
Addressing the need for accurate dose calculation in MRI-only radiotherapy, the generation of synthetic Computed Tomography (sCT) from MRI has emerged. Deep learning (DL) techniques, have shown promising results in achieving high sCT accuracies. However, existing sCT synthesis methods are often center-specific, posing a challenge to their generalizability.
View Article and Find Full Text PDFPhys Eng Sci Med
December 2023
Univ Rennes, CLCC Eugène Marquis, INSERM, LTSI - UMR 1099, Rennes, France.
Radiation therapy is moving from CT based to MRI guided planning, particularly for soft tissue anatomy. An important requirement of this new workflow is the generation of synthetic-CT (sCT) from MRI to enable treatment dose calculations. Automatic methods to determine the acceptable range of CT Hounsfield Unit (HU) uncertainties to avoid dose distribution errors is thus a key step toward safe MRI-only radiotherapy.
View Article and Find Full Text PDFRadiother Oncol
September 2023
Ingham Institute for Applied Medical Research, Sydney, New South Wales, Australia; South Western Clinical Campuses, University of New South Wales, Australia; Centre for Medical Radiation Physics, University of Wollongong, New South Wales, Australia; Institute of Medical Physics, The University of Sydney, New South Wales, Australia; Liverpool and Macarthur Cancer therapy Centres, Liverpool Hospital, New South Wales, Australia.
Crit Care
May 2023
Department of Anaesthesia and Intensive Care Medicine, School of Medicine, Clinical Sciences Institute, University of Galway, Galway University Hospital, Saolta Hospital Group, Galway, H91 YR71, Ireland.
Int J Nurs Stud
July 2023
School of Nursing & Centre for Healthcare Transformation, Queensland University of Technology (QUT), Kelvin Grove, Queensland 4059, Australia; Metro North Hospital and Health Service, Herston, Queensland 4029, Australia.
Background: Monitoring body temperature is essential for safe perioperative care. Without patient monitoring during each surgical phase, alterations in core body temperature will not be recognised, prevented, or treated. Safe use of warming interventions also depends on monitoring.
View Article and Find Full Text PDFPhys Eng Sci Med
June 2023
School of Mechanical, Medical and Process Engineering, Faculty of Engineering, Queensland University of Technology, Brisbane, QLD, Australia.
Crit Care
January 2023
Department of Anaesthesia and Intensive Care Medicine, School of Medicine, Clinical Sciences Institute, University of Galway, Galway University Hospital, Saolta Hospital Group, Galway, H91 YR71, Ireland.
Background: Acute kidney injury (AKI) is a frequent and severe complication of both COVID-19-related acute respiratory distress syndrome (ARDS) and non-COVID-19-related ARDS. The COVID-19 Critical Care Consortium (CCCC) has generated a global data set on the demographics, management and outcomes of critically ill COVID-19 patients. The LUNG-SAFE study was an international prospective cohort study of patients with severe respiratory failure, including ARDS, which pre-dated the pandemic.
View Article and Find Full Text PDFPhys Med
November 2022
Univ. Rennes 1, CLCC Eugène Marquis, INSERM, LTSI - UMR 1099, F-35000 Rennes, France.
Purpose: The first aim was to generate and compare synthetic-CT (sCT) images using a conditional generative adversarial network (cGAN) method (Pix2Pix) for MRI-only prostate radiotherapy planning by testing several generators, loss functions, and hyper-parameters. The second aim was to compare the optimized Pix2Pix model with five other architectures (bulk-density, atlas-based, patch-based, U-Net, and GAN).
Methods: For 39 patients treated by VMAT for prostate cancer, T2-weighted MRI images were acquired in addition to CT images for treatment planning.
Sci Rep
August 2022
Intensive Care Unit, Princess Alexandra Hospital, Brisbane, QLD, 4102, Australia.
Australas Emerg Care
March 2023
James Cook University, College of Public Health, Medical and Veterinary Sciences, 1 James Cook Drive, Townsville, Queensland, Australia.
Introduction: Acute appendicitis is the most common cause of acute abdominal pain presentations to the ED and common air ambulance transfer.
Aims: describe how linked data can be used to explore patients' journeys, referral pathways and request-to-activation responsiveness of patients' appendectomy outcomes (minor vs major complexity).
Methods: Data sources were linked: aeromedical, hospital and death.
Sci Rep
July 2022
Intensive Care Unit, Princess Alexandra Hospital, Brisbane, QLD, 4102, Australia.
The Electronic Medical Record (EMR) provides an opportunity to manage patient care efficiently and accurately. This includes clinical decision support tools for the timely identification of adverse events or acute illnesses preceded by deterioration. This paper presents a machine learning-driven tool developed using real-time EMR data for identifying patients at high risk of reaching critical conditions that may demand immediate interventions.
View Article and Find Full Text PDFJ Med Radiat Sci
March 2022
Calvary Mater Newcastle Hospital, Newcastle, New South Wales, Australia.
Introduction: Assessing the use of a radiation therapy (RT) planning MRI performed in the treatment position (pMRI) on target volume delineation and effect on organ at risk dose for oropharyngeal cancer patients planned with diagnostic MRI (dMRI) and CT scan.
Methods: Diagnostic MRI scans were acquired for 26 patients in a neutral patient position using a 3T scanner (dMRI). Subsequent pMRI scans were acquired on the same scanner with a flat couch top and the patient in their immobilisation mask.
Phys Med Biol
September 2021
Ingham Institute for Applied Medical Research, Sydney, New South Wales, Australia.
Phys Med
September 2021
Univ. Rennes 1, CLCC Eugène Marquis, INSERM, LTSI - UMR 1099, F-35000 Rennes, France.
Purpose: In radiotherapy, MRI is used for target volume and organs-at-risk delineation for its superior soft-tissue contrast as compared to CT imaging. However, MRI does not provide the electron density of tissue necessary for dose calculation. Several methods of synthetic-CT (sCT) generation from MRI data have been developed for radiotherapy dose calculation.
View Article and Find Full Text PDFJ Med Radiat Sci
December 2020
Department of Radiation Oncology, Calvary Mater Newcastle Hospital, Newcastle, New South Wales, Australia.
Deformable image registration is an increasingly important method to account for soft tissue deformation between image acquisitions. This editorial discusses the clinical need and current status of deformable image registration.
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