41 results match your criteria: "CREA - Research Centre for Genomics and Bioinformatics[Affiliation]"
Plant Genome
March 2025
CREA - Research Centre for Genomics and Bioinformatics, Fiorenzuola d'Arda (PC), Italy.
Fusarium head blight (FHB), mainly caused by Fusarium graminearum and Fusarium culmorum, is a major wheat disease. Significant efforts have been made to improve resistance to FHB in bread wheat (Triticum aestivum), but more work is needed for durum wheat (Triticum turgidum spp. durum).
View Article and Find Full Text PDFPlant Cell Rep
September 2024
Department of Biosciences, University of Milan, 20133, Milan, Italy.
The barley mutant xan-h.chli-1 shows phenotypic features, such as reduced leaf chlorophyll content and daily transpiration rate, typical of wild barley accessions and landraces adapted to arid climatic conditions. The pale green trait, i.
View Article and Find Full Text PDFFront Plant Sci
August 2024
Council for Agricultural Research and Economics (CREA) - Research Centre for Genomics and Bioinformatics, Fiorenzuola d'Arda, Italy.
Sci Rep
March 2024
Department of Agricultural and Environmental Sciences (DISAA), University of Milan, 20133, Milan, Italy.
Mutations affecting flower shape in many plants have been favored by human selection, and various fruit trees are also grown for ornamental purposes. Mei (Prunus mume) is a dual purpose tree originated in China well known in the Western world for its generous early blooms, often bearing double flowers. Building on the knowledge of its genomic location, a candidate gene approach was used to identify a 49 bp deletion encompassing the miR172 target site of the euAP2 gene pmTOE (PmuVar_Ch1_3490) as a prime variant linked to flower doubleness.
View Article and Find Full Text PDFPlants (Basel)
November 2023
Council for Agricultural Research and Economics (CREA)-Research Centre for Genomics and Bioinformatics, Via S. Protaso 302, 29017 Fiorenzuola d'Arda, PC, Italy.
Basic features of seed dormancy are illustrated. The seed overall regulatory network governs seed metabolism and development, and it is coordinated by plant hormones. A functional model focused on abscisic acid (ABA), the foremost plant hormone in dormancy, is used as a framework to critically discuss the literature.
View Article and Find Full Text PDFFront Plant Sci
October 2023
Council for Agricultural Research and Economics (CREA) - Research Centre for Genomics and Bioinformatics, Fiorenzuola d'Arda, Italy.
Durum wheat breeding relies on grain yield improvement to meet its upcoming demand while coping with climate change. Kernel size and shape are the determinants of thousand kernel weight (TKW), which is a key component of grain yield, and the understanding of the genetic control behind these traits supports the progress in yield potential. The present study aimed to dissect the genetic network responsible for kernel size components (length, width, perimeter, and area) and kernel shape traits (width-to-length ratio and formcoefficient) as well as their relationships with kernel weight, plant height, and heading date in durum wheat.
View Article and Find Full Text PDFMethods Mol Biol
August 2023
Instituto de Biología Molecular y Celular de Plantas CSIC-UPV, Campus de la Universidad Politécnica de Valencia, Valencia, Spain.
Carpels are the female reproductive organs of the flower, organized in a gynoecium, which is likely the most complex organ of the plant. The gynoecium provides protection for the ovules, helps to discriminate between male gametophytes, and facilitates successful pollination. After fertilization, it develops into a fruit, a specialized organ for seed protection and dispersal.
View Article and Find Full Text PDFJ Exp Bot
October 2023
Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022 Valencia, Spain.
Eggplant (Solanum melongena) is a major vegetable crop with great potential for genetic improvement owing to its large and mostly untapped genetic diversity. It is closely related to over 500 species of Solanum subgenus Leptostemonum that belong to its primary, secondary, and tertiary genepools and exhibit a wide range of characteristics useful for eggplant breeding, including traits adaptive to climate change. Germplasm banks worldwide hold more than 19 000 accessions of eggplant and related species, most of which have yet to be evaluated.
View Article and Find Full Text PDFFront Plant Sci
January 2023
Institute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Haná for Biotechnological and Agricultural Research, Olomouc, Czechia.
Nat Plants
June 2022
John Innes Centre, Norwich Research Park, Norwich, UK.
Poor vitamin D status is a global health problem; insufficiency underpins higher risk of cancer, neurocognitive decline and all-cause mortality. Most foods contain little vitamin D and plants are very poor sources. We have engineered the accumulation of provitamin D in tomato by genome editing, modifying a duplicated section of phytosterol biosynthesis in Solanaceous plants, to provide a biofortified food with the added possibility of supplement production from waste material.
View Article and Find Full Text PDFAntioxidants (Basel)
April 2022
CREA-Research Centre for Genomics and Bioinformatics, Via San Protaso 302, 29017 Fiorenzuola d'Arda, Italy.
Given the general beneficial effects of antioxidants-rich foods on human health and disease prevention, there is a continuous interest in plant secondary metabolites conferring attractive colors to fruits and grains and responsible, together with others, for nutraceutical properties. Cereals and are important components of the human diet, thus, they are the main targets for functional food development by exploitation of genetic resources and metabolic engineering. In this review, we focus on the impact of antioxidants-rich cereal and derived foods on human health by analyzing natural biodiversity and biotechnological strategies aiming at increasing the antioxidant level of grains and fruits, the impact of agronomic practices and food processing on antioxidant properties combined with a focus on the current state of pre-clinical and clinical studies.
View Article and Find Full Text PDFPlants (Basel)
March 2022
Department Agraria, University Mediterranea of Reggio Calabria, 89122 Reggio Calabria, Italy.
Nitrogen (N) fertilization is one of the main inputs to increase crop yield and food production. However, crops utilize only 30-40% of N applied; the remainder is leached into the soil, causing environmental and health damage. In this scenario, the improvement of nitrogen-use efficiency (NUE) will be an essential strategy for sustainable agriculture.
View Article and Find Full Text PDFMol Plant
March 2022
CREA Research Centre for Genomics and Bioinformatics, Via San Protaso 302, Fiorenzuola d'Arda 29017, Italy. Electronic address:
Einkorn (Triticum monococcum L. subsp. monococcum, 2n = 2× = 14, AmAm) is a diploid wheat whose cultivation was widespread in the Mediterranean and European area till the Bronze Age, before it was replaced by the more productive durum and bread wheats.
View Article and Find Full Text PDFPlant Physiol Biochem
October 2021
CREA Research Centre for Genomics and Bioinformatics, via Paullese 28, 26836, Montanaso Lombardo (LO), Italy.
Eggplant fruits are normally harvested and marketed when they reach the commercial maturity, that precedes the physiological ripening when dramatic changes in taste, composition and peel color take place. The biochemical changes in fruit peel across the developmental stages, characterized also by a sizeable decrement of anthocyanins, were studied in four eggplant genotypes differing for fruit pigmentation. HPLC-DAD, HPLC-ESI-MS and NMR analyses identified naringenin chalcone and naringenin 7-O-glucoside as the main phenolic compounds in extracts from the physiological ripe stage, along with compounds tentatively identified as glycosylated naringenin chalcone, naringenin and kaempferol.
View Article and Find Full Text PDFPlant J
July 2021
ENEA, Casaccia Res Ctr, Via Anguillarese 301, Rome, 00123, Italy.
Eggplant (Solanum melongena L.) is an important horticultural crop and one of the most widely grown vegetables from the Solanaceae family. It was domesticated from a wild, prickly progenitor carrying small, round, non-anthocyanic fruits.
View Article and Find Full Text PDFInt J Mol Sci
March 2021
DiSIT-Dipartimento di Scienze e Innovazione Tecnologica, Università del Piemonte Orientale, 13100 Vercelli, Italy.
Leaf rust and powdery mildew are two important foliar diseases in wheat. A recombinant inbred line (RIL) population, obtained by crossing two bread wheat cultivars ('Victo' and 'Spada'), was evaluated for resistance to the two pathogens at seedling stage. Upon developing a genetic map of 8726 SNP loci, linkage analysis identified three resistance Quantitative Trait Loci (QTLs), with 'Victo' contributing the resistant alleles to all loci.
View Article and Find Full Text PDFJ Exp Bot
May 2021
Dipartimento Agraria, Università degli Studi Mediterranea di Reggio Calabria, Loc. Feo di Vito, Reggio Calabria, Italy.
Nitrogen-use efficiency (NUE) is a complex trait of great interest in breeding programs because through its improvement, high crop yields can be maintained whilst N supply is reduced. In this study, we report a transcriptomic analysis of four NUE-contrasting eggplant (Solanum melongena) genotypes following short- and long-term exposure to low N, to identify key genes related to NUE in the roots and shoots. The differentially expressed genes in the high-NUE genotypes are involved in the light-harvesting complex and receptor, a ferredoxin-NADP reductase, a catalase and WRKY33.
View Article and Find Full Text PDFTrends Plant Sci
July 2021
CREA Research Centre for Genomics and Bioinformatics, Fiorenzuola d'Arda, 29017, Italy. Electronic address:
Durum wheat (tetraploid) and bread wheat (hexaploid) are two closely related species with potentially different adaptation capacities and only a few distinct technological properties that make durum semolina and wheat flour more suitable for pasta, or bread and bakery products, respectively. Interspecific crosses and new breeding technologies now allow researchers to develop wheat lines with durum or bread quality features in either a tetraploid or hexaploid genetic background; such lines combine any technological properties of wheat with the different adaptation capacity expressed by tetraploid and hexaploid wheat genomes. Here, we discuss what makes bread and durum wheat different, consider their environmental adaptation capacity and the major quality-related genes that explain the different end-uses of semolina and bread flour and that could be targets for future wheat breeding programs.
View Article and Find Full Text PDFFront Plant Sci
January 2021
CREA Research Centre for Genomics and Bioinformatics, Fiorenzuola d'Arda, Italy.
The Italian grape germplasm is characterized by a high level of richness in terms of varieties number, with nearly 600 wine grape varieties listed in the Italian National Register of Grapevine Varieties and with a plethora of autochthonous grapes. In the present study an extended SNP genotyping has been carried out on Italian germplasm of cultivated subsp. and hybrids.
View Article and Find Full Text PDFInt J Mol Sci
December 2020
Department of Agricultural and Environmental Science, University of Bari Aldo Moro, 70126 Bari, Italy.
Durum wheat ( L. ssp. ) is a minor crop grown on about 17 million hectares of land worldwide.
View Article and Find Full Text PDFFlowering and fruiting are processes subject to complex control by environmental and endogenous signals. Endogenous signals comprise, besides classical phytohormones, also signaling peptides and miniproteins. Tomato cystine-knot miniproteins (TCMPs), which belong to a Solanaceous-specific group of Cys-rich protein family, have been recently involved in fruit development.
View Article and Find Full Text PDFPlants (Basel)
October 2020
CNR-IBBR, National Research Council of Italy, Institute of Biosciences and BioResources, Via Università 133, 80055 Portici (NA), Italy.
In various crops, genetic bottlenecks occurring through domestication can limit crop resilience to biotic and abiotic stresses. In the present study, we investigated nucleotide diversity in tomato chloroplast genome through sequencing seven plastomes of cultivated accessions from the Campania region (Southern Italy) and two wild species among the closest () and most distantly related () species to cultivated tomatoes. Comparative analyses among the chloroplast genomes sequenced in this work and those available in GenBank allowed evaluating the variability of plastomes and defining phylogenetic relationships.
View Article and Find Full Text PDFInt J Mol Sci
October 2020
Centre for Agricultural Research, Agricultural Institute, 2462 Martonvásár, Hungary.
In cereals, C-repeat binding factor genes have been defined as key components of the light quality-dependent regulation of frost tolerance by integrating phytochrome-mediated light and temperature signals. This study elucidates the differences in the lipid composition of barley leaves illuminated with white light or white light supplemented with far-red light at 5 or 15 °C. According to LC-MS analysis, far-red light supplementation increased the amount of monogalactosyldiacylglycerol species 36:6, 36:5, and 36:4 after 1 day at 5 °C, and 10 days at 15 °C resulted in a perturbed content of 38:6 species.
View Article and Find Full Text PDFMol Plant
October 2020
CREA Research Centre for Genomics and Bioinformatics, Via San Protaso 302, Fiorenzuola d'Arda, 29017, Italy. Electronic address: