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Numerical simulation of diffusion MRI signals using an adaptive time-stepping method.

Phys Med Biol

January 2014

INRIA Saclay-Equipe DEFI, CMAP, Ecole Polytechnique Route de Saclay, F-91128, Palaiseau Cedex, France. NeuroSpin, CEA Saclay Center 91191 Gif-sur-Yvette Cedex, France.

The effect on the MRI signal of water diffusion in biological tissues in the presence of applied magnetic field gradient pulses can be modelled by a multiple compartment Bloch-Torrey partial differential equation. We present a method for the numerical solution of this equation by coupling a standard Cartesian spatial discretization with an adaptive time discretization. The time discretization is done using the explicit Runge-Kutta-Chebyshev method, which is more efficient than the forward Euler time discretization for diffusive-type problems.

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