5,059 results match your criteria: "Biosciences Institute[Affiliation]"

The resurgent navigation project known as the Hidrovia Paraguay-Paraná threatens the integrity of the Pantanal, the world's largest wetland, which is considered a biome of its own. Intensive barge navigation is intended to transport crops (soybean, sugar, corn) and cement, iron and manganese from areas of production in Brazil, Paraguay and Bolivia to the oceanic ports of the Plata River. This short communication assembles the information available on the potential impacts of the planned deepening of the natural channel of the Paraguay River in its ~700 km-long upper section.

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Spatial selective auditory attention is preserved in older age but is degraded by peripheral hearing loss.

Sci Rep

October 2024

Department of Speech Hearing and Phonetic Sciences, Division of Psychology and Language Sciences, University College London, Chandler House, 2 Wakefield Street, London, WC1N 3PF, UK.

Interest in how ageing affects attention is long-standing, although interactions between sensory and attentional processing in older age are not fully understood. Here, we examined interactions between peripheral hearing and selective attention in a spatialised cocktail party listening paradigm, in which three talkers spoke different sentences simultaneously and participants were asked to report the sentence spoken by a talker at a particular location. By comparing a sample of older (N = 61; age = 55-80 years) and younger (N = 58; age = 18-35 years) adults, we show that, as a group, older adults benefit as much as younger adults from preparatory spatial attention.

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Protocol for mapping differential protein-protein interaction networks using affinity purification-mass spectrometry.

STAR Protoc

December 2024

Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, Los Angeles, CA, USA; Institute for Quantitative and Computational Biosciences, University of California, Los Angeles, Los Angeles, CA, USA; Molecular Biology Institute, University of California Los Angeles, Los Angeles, CA, USA. Electronic address:

Article Synopsis
  • * The text describes a specific proteomics method called affinity purification-mass spectrometry (AP-MS) to study protein interactions by tagging "bait" proteins in mammalian cells.
  • * This protocol allows researchers to identify, quantify, and visualize changes in protein-protein interaction networks under different conditions and is adaptable across various cell types and biological studies.
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Increased endothelial cell proliferation is a hallmark of arteriovenous malformations (AVMs) in hereditary hemorrhagic telangiectasia (HHT). Here, we report a cyclin-dependent kinase 6 (CDK6)-driven mechanism of cell cycle deregulation involved in endothelial cell proliferation and HHT pathology. Specifically, endothelial cells from the livers of HHT mice bypassed the G1/S checkpoint and progressed through the cell cycle at an accelerated pace.

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Genetics of Latin American Diversity Project: Insights into population genetics and association studies in admixed groups in the Americas.

Cell Genom

November 2024

Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA; Department of Medicine, University of Maryland School of Medicine, Baltimore, MD, USA; Program in Health Equity and Population Health, University of Maryland School of Medicine, Baltimore, MD 21201, USA; Program in Personalized Genomic Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA. Electronic address:

Article Synopsis
  • Latin Americans are often overlooked in genetic studies, which can widen gaps in personalized medicine due to the challenges of accessing genetic data and consent processes.
  • The Genetics of Latin American Diversity (GLAD) Project compiles genetic information from over 53,000 individuals across various regions to explore diverse ancestry and gene flow in the Americas.
  • GLAD includes a tool called GLAD-match to align external genetic samples with its database while protecting individual privacy, thus supporting more inclusive genomic research and enhancing personalized medicine for Latin Americans.
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The human immune system is made up of a huge variety of cell types each with unique functions. Local networks of resident immune cells are poised to sense and protect against pathogen entry, whereas more widespread innate and adaptive immune networks provide first rapid, then long-lasting and targeted responses. However, how we develop such a diverse and complex system remains unknown.

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Single phage proteins sequester signals from TIR and cGAS-like enzymes.

Nature

November 2024

State Key Laboratory of Chemical Resource Engineering, Beijing Advanced Innovation Center for Soft Matter Science and Engineering, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.

Prokaryotic anti-phage immune systems use TIR and cGAS-like enzymes to produce 1''-3'-glycocyclic ADP-ribose (1''-3'-gcADPR) and cyclic dinucleotide (CDN) and cyclic trinucleotide (CTN) signalling molecules, respectively, which limit phage replication. However, how phages neutralize these distinct and common systems is largely unclear. Here we show that the Thoeris anti-defence proteins Tad1 and Tad2 both achieve anti-cyclic-oligonucleotide-based anti-phage signalling system (anti-CBASS) activity by simultaneously sequestering CBASS cyclic oligonucleotides.

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California's organic waste diversion law, SB 1383, mandates a 75% reduction in organics disposal by 2025 to reduce landfill methane emissions. Composting will likely be the primary alternative to landfilling, and 75-100 new large-scale composting facilities must be sited in the state to meet its diversion goal. We developed a strategy for evaluating site suitability for commercial composting by incorporating land-use, economic, and environmental justice criteria.

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Article Synopsis
  • - The study investigates the embryonic origins of Bicuspid Aortic Valve (BAV), a common congenital heart defect, and reveals that zebrafish share similar developmental processes to human and mouse, specifically in the formation of arterial valve leaflets.
  • - Researchers used techniques like live imaging and immunohistochemistry to demonstrate that zebrafish arterial valve primordia develop from second heart field progenitors without any contribution from other cell sources, differentiating from how the atrioventricular valve forms.
  • - The findings confirm that zebrafish are a valuable model for studying BAV, potentially aiding in the functional testing of genetic variants associated with the condition.
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The daily experience of hunger in UK females with and without food insecurity.

Appetite

January 2025

Institut Jean Nicod, Département d'études cognitives, École Normale Supérieure, Université PSL, EHESS, CNRS, Paris, France; Department of Social Work, Education and Community Wellbeing, Northumbria University at Newcastle, Newcastle, UK. Electronic address:

Food insecurity (FI) is associated with increased mortality risk, depression, and obesity in females in high-income countries, but causal mechanisms remain unclear. FI is often assumed to lead to increased levels of hunger. However, quantitative evidence describing daily experiences of hunger in FI is lacking.

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Oxidative stress and cell senescence as drivers of ageing: Chicken and egg.

Ageing Res Rev

December 2024

Ageing Research Laboratories, Biosciences Institute, Faculty of Medical Sciences, Campus for Ageing and Health, Newcastle University, UK. Electronic address:

Article Synopsis
  • Oxidative stress and cell senescence contribute to ageing and related diseases in a complex interplay, where each can amplify the other.
  • The review investigates the hypothesis that senescent cells significantly drive tissue and systemic oxidative stress as organisms age.
  • While current evidence suggests a connection between senescent cells and increased oxidative stress, it remains insufficient to definitively establish this relationship.
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Epigenome-wide analysis across the development span of pediatric acute lymphoblastic leukemia: backtracking to birth.

Mol Cancer

October 2024

Epigenomics and Mechanisms Branch, International Agency for Research on Cancer, (IARC), 25 avenue Tony Garnier, CS 90627, Lyon, Cedex 07 69366, France.

Background: Cancer is the leading cause of disease-related mortality in children. Causes of leukemia, the most common form, are largely unknown. Growing evidence points to an origin in-utero, when global redistribution of DNA methylation occurs driving tissue differentiation.

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Pharmaceuticals and personal care products (PPCPs) are known to interact with microplastics (MPs) in aquatic environments, with substances such as the antimicrobial triclosan (TCS) and the synthetic hormone 17α-ethinylestradiol (EE2) being prevalent. These persistent contaminants are linked to toxic effects in aquatic organisms. This study aimed to investigate histological and morphometric changes in the gills of Ucides cordatus exposed to microplastics alone and microplastics contaminated with PPCPs.

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Left ventricular noncompaction cardiomyopathy is associated with heart failure, arrhythmia, and sudden cardiac death. The developmental mechanism underpinning noncompaction in the adult heart is still not fully understood, with lack of trabeculae compaction, hypertrabeculation, and loss of proliferation cited as possible causes. To study this, we utilised a mouse model of aberrant Rho kinase (ROCK) signalling in cardiomyocytes, which led to a noncompaction phenotype during embryogenesis, and monitored how this progressed after birth and into adulthood.

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Mechanisms of brain self-regulation: psychological factors, mechanistic models and neural substrates.

Philos Trans R Soc Lond B Biol Sci

December 2024

Department of Physiology and Biophysics, Washington National Primate Research Center, University of Washington, Seattle, WA, USA.

While neurofeedback represents a promising tool for neuroscience and a brain self-regulation approach to psychological rehabilitation, the field faces several problems and challenges. Current research has shown great variability and even failure among human participants in learning to self-regulate target features of brain activity with neurofeedback. A better understanding of cognitive mechanisms, psychological factors and neural substrates underlying self-regulation might help improve neurofeedback's scientific and clinical practices.

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Prognostic value of repeated peak oxygen uptake measurements in patients with a left ventricular assist device.

J Heart Lung Transplant

February 2025

Department of Cardiology, Copenhagen University Hospital, Rigshospitalet, Copenhagen, Denmark; Department of Clinical Medicine, University of Copenhagen, Copenhagen, Denmark.

Background: Peak oxygen uptake (pVO) predicts mortality in patients with heart failure on left ventricular assist device (LVAD) support. This follow-up of the PRO-VAD study examines the prognostic value of repeated pVO measurements during long-term follow-up.

Methods: This multicenter follow-up study included patients from the original PRO-VAD cohort who performed a cardiopulmonary exercise test (CPET) twice.

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Neural Correlates of Category Learning in Monkey Inferior Temporal Cortex.

J Neurosci

December 2024

Laboratory of Neuropsychology, National Institute of Mental Health, National Institutes of Health, Bethesda, Maryland 20892

Area TE is required for normal learning of visual categories based on perceptual similarity. To evaluate whether category learning changes neural activity in area TE, we trained two monkeys (both male) implanted with multielectrode arrays to categorize natural images of cats and dogs. Neural activity during a passive viewing task was compared pre- and post-training.

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Aim: We sought the cardiopulmonary exercise testing (CPET) parameter that most accurately reflected therapeutic efficacy in patients with hypertrophic cardiomyopathy (HCM).

Methods: Well-being questionnaire, N-terminal brain natriuretic peptide measurements, echocardiography, and CPET were performed in patients with symptomatic non-obstructive HCM during phase II, randomized, open-label multicentre study, before and after 16 weeks of traditional or sacubitril/valsartan treatment. Patients were followed 36 months after the initial CPET.

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Commentary: Is precision for septation achieved by mapping or morphology?

J Thorac Cardiovasc Surg

October 2024

Biosciences Institute, Newcastle University, Newcastle-upon-Tyne, United Kingdom. Electronic address:

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Structural requirements for the specific binding of CRABP2 to cyclin D3.

Structure

December 2024

Newcastle University Centre for Cancer, Translational and Clinical Research Institute, Newcastle University, Paul O'Gorman Building, Framlington Place, Newcastle upon Tyne NE2 4HH, UK. Electronic address:

Article Synopsis
  • CRABP2 is a protein that transports retinoic acid to the nucleus, where it activates gene transcription by interacting with retinoic acid receptors.
  • CRABP2 also binds specifically to cyclin D3, and the binding sites for cyclin D3 and retinoic acid overlap within a specific region of the protein.
  • Mutations that disrupt the binding of both cyclin D3 and retinoic acid alter the structure of CRABP2, revealing insights into its function and interaction with cyclin D3 in the context of the CDK4/6 complex.
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Assessing the performance of multi-InDel panels for human identification among admixed Brazilians.

Forensic Sci Int Genet

January 2025

Molecular Genetics and Bioinformatics Laboratory, Experimental Research Unit - Unipex, School of Medicine, São Paulo State University - UNESP, Botucatu, São Paulo, Brazil; São Paulo State University (UNESP), Department of Pathology, School of Medicine, Botucatu, São Paulo, Brazil. Electronic address:

Insertion/deletion polymorphisms, or InDels, are widely present in the human genome. They have been considered as potential markers for forensic analysis because they can be genotyped using the CE platform and compatible typing techniques used in forensic laboratories. Additionally, InDels have lower mutation rates and often short amplicon sizes, making them ideal for detecting degraded samples.

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Importance: Evidence is limited to support therapies to treat submacular hemorrhage (SMH) secondary to neovascular age-related macular degeneration (AMD) as an adjunct to anti-vascular endothelial growth factor therapy (anti-VEGF).

Objective: To determine if intravitreal tissue plasminogen activator (TPA) or gas improves visual acuity or promotes resolution of SMH secondary to neovascular AMD in eyes treated with ranibizumab.

Design, Setting, And Participants: This was a double-masked, sham-controlled, factorial randomized clinical trial and feasibility study that recruited participants from June 2014 to March 2019, with 12 months' follow-up.

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Combined oxidative phosphorylation deficiency (COXPD) is a rare multisystem disorder which is clinically and genetically heterogeneous. Genome sequencing identified biallelic variants in individuals from five unrelated families with presentations ranging from Perrault syndrome (primary ovarian insufficiency and sensorineural hearing loss) to severe childhood onset of leukodystrophy, learning disability, microcephaly and retinal dystrophy. Complexome profiling of fibroblasts from affected individuals revealed reduced levels of the small and, a more pronounced reduction of, the large mitochondrial ribosomal subunits.

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