1,315 results match your criteria: "Bioscience Research Center[Affiliation]"

Convergent-Diffusion Denoising Model for multi-scenario CT Image Reconstruction.

Comput Med Imaging Graph

January 2025

The Department of Computer and Data Science, Case Western Reserve University, Cleveland, OH, USA; The Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.

A generic and versatile CT Image Reconstruction (CTIR) scheme can efficiently mitigate imaging noise resulting from inherent physical limitations, substantially bolstering the dependability of CT imaging diagnostics across a wider spectrum of patient cases. Current CTIR techniques often concentrate on distinct areas such as Low-Dose CT denoising (LDCTD), Sparse-View CT reconstruction (SVCTR), and Metal Artifact Reduction (MAR). Nevertheless, due to the intricate nature of multi-scenario CTIR, these techniques frequently narrow their focus to specific tasks, resulting in limited generalization capabilities for diverse scenarios.

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The Genetics of Neurodevelopmental Disorders Lab in Padua provided a new intellectual disability (ID) Panel challenge for computational methods to predict patient phenotypes and their causal variants in the context of the Critical Assessment of the Genome Interpretation, 6th edition (CAGI6). Eight research teams submitted a total of 30 models to predict phenotypes based on the sequences of 74 genes (VCF format) in 415 pediatric patients affected by Neurodevelopmental Disorders (NDDs). NDDs are clinically and genetically heterogeneous conditions, with onset in infant age.

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Increased Mineral-Associated Organic Carbon and Persistent Molecules in Allochthonous Blue Carbon Ecosystems.

Glob Chang Biol

January 2025

CAS Key Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research (YIC), Chinese Academy of Sciences (CAS), Shandong Key Laboratory of Coastal Environmental Processes, YICCAS, Yantai, China.

Coastal wetlands contain very large carbon (C) stocks-termed as blue C-and their management has emerged as a promising nature-based solution for climate adaptation and mitigation. The interactions among sources, pools, and molecular compositions of soil organic C (SOC) within blue C ecosystems (BCEs) remain elusive. Here, we explore these interactions along an 18,000 km long coastal line of salt marshes, mangroves, and seagrasses in China.

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(1) Car tyre microplastic particles (TMPs) significantly contribute to global microplastic pollution, with an estimated annual production of 6 million tonnes. However, the impact of TMPs, particularly tyre and road wear particles (TRWPs), resulting from tyre abrasion on the road on terrestrial organisms, is poorly understood. This study investigated the effects of TMPs and TRWPs on the growth, immune response, behaviour, and cognition of the woodlouse over 30 days; (2) TMPs and TRWPs were mixed together in the first experiment and provided at different concentrations of 1.

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Lung cancer continues to be the second most common cancer diagnosed and the main cause of cancer-related death globally, which requires novel and effective treatment strategies. When considering treatment options, non-small cell lung cancer (NSCLC) remained a challenge, seeking new therapeutic strategies High-power microwave (HPM) progressions have facilitated the advancement of new technologies as well as improvements to those already in use. The impact of HPM on NSCLC has not been investigated before.

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Enhanced TOC removal from paper mill wastewater using air dielectric barrier discharge plasma with persulfate sources: Mechanistic insights and continuous flow operation performance evaluation.

J Hazard Mater

December 2024

Department of Environmental Engineering, Kwangwoon University, Seoul 01897, Republic of Korea; Plasma Bioscience Research Center/Department of Electrical and Biological Physics, Kwangwoon University, Seoul 01897, Republic of Korea. Electronic address:

This study investigates the removal of total organic carbon (TOC) from paper mill wastewater using air dielectric barrier discharge (DBD) plasma, combined with various persulfate sources, namely potassium peroxymonosulfate (PMS), potassium peroxydisulfate (PDS), and sodium persulfate (SPS). Mechanistic insights into the activation of plasma-PDS and -PMS were obtained through quenching experiments and electron spin resonance (ESR) techniques. The addition of persulfate to air DBD plasma increased TOC removal kinetics by approximately 1.

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Nonthermal Plasma Boosted Dichloroacetate Induces Metabolic Shifts to Combat Glioblastoma CSCs via Oxidative Stress.

Free Radic Biol Med

December 2024

Plasma Bioscience Research Center/Department of Electrical and Biological Physics, Kwangwoon University, Seoul, 01897, South Korea. Electronic address:

Glioblastoma (GBM) remains a formidable clinical challenge, with cancer stem cells (CSCs) contributing to treatment resistance and tumor recurrence. Conventional treatments often fail to eradicate these CSCs characterized by enhanced resistance to standard therapies through metabolic plasticity making them key targets for novel treatment approaches. Addressing this challenge, this study introduces a novel combination therapy of dichloroacetate (DCA), a metabolic modulator and nonthermal plasma to induce oxidative stress in glioblastomas.

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Triple-negative breast cancer (TNBC) stands as the most complex and daunting subtype of breast cancer affecting women globally. Regrettably, treatment options for TNBC remain limited due to its clinical complexity. However, immunotherapy has emerged as a promising avenue, showing success in developing effective therapies for advanced cases and improving patient outcomes.

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Age-related differences in gene expression and pathway activation following heat stroke.

Physiol Genomics

December 2024

Experimental Medicine Department, King Abdullah International Medical Research Center, King Saud bin Abdulaziz University for Health Sciences, Ministry of National Guard Health Affairs, Riyadh, 11481, Saudi Arabia.

This study investigates the molecular responses to heat stroke in young and old patients by comparing whole-genome transcriptomes between age groups. We analyzed transcriptomic profiles from patients categorized into two age-defined cohorts: young (mean age = 44.9 ± 6 years) and old (mean age = 66.

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Epipelagic community as prominent biosensor for sub-micron and nanoparticles uptake: Insights from field and laboratory experiments.

Environ Pollut

December 2024

Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Naples, Italy; NBFC, National Biodiversity Future Center, Piazza Marina 61, 9013, Palermo, Italy; Department of Life Sciences, University of Trieste, Via Licio Giorgieri, 34127, Trieste, Italy. Electronic address:

Nowadays, ENMs/NPLs particles have not yet been extensively measured in the environment, but there is increased concern that this size fraction may be more widely distributed and hazardous than larger-sized particles. This study aimed to examine the bioaccumulation potential of engineered nanomaterials and nanoplastics (ENMs/NPLs) across marine food webs, focusing on plankton communities and commercial fish species (Engraulis encrasicolus and Scomber colias) from the Gulf of Naples. Laboratory experiments on plankton assemblages exposed to fluorescent polystyrene nanoplastics (PS-NPs, 100 nm) for 24h at concentrations ranging from 0.

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Aim: The intricate structure of the tooth root canals has a role in the colonization and biofilm formation in hidden areas that are hardly reached by standard endodontic treatments. This review aims at summarizing data from and studies for a better understanding of the application of cold atmospheric plasma (CAP) for the disinfection of dental root canals.

Methods: PubMed, Scopus, and Web of Science databases were screened.

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Polymers have become essential in advancing bone tissue engineering, providing adaptable bone healing and regeneration solutions. Their biocompatibility and biodegradability make them ideal candidates for creating scaffolds that mimic the body's natural extracellular matrix (ECM). However, significant challenges remain, including degradation by-products, insufficient mechanical strength, and suboptimal cellular interactions.

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Cutaneous colonization with Staphylococcus aureus (SA) is frequently observed in patients with atopic dermatitis. SA produces a wide variety of bacterial toxins, among which δ-toxin was found to induce degranulation of mast cells. Degranulation of mast cells could enhance bacterial clearance and protection from future SA infection but lead to exacerbation of atopic dermatitis.

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The unseen perils of oral-care products generated micro/nanoplastics on human health.

Ecotoxicol Environ Saf

December 2024

KIIT School of Biotechnology, KIIT University, Bhubaneswar, Odisha 751024, India; Department of Toxicology, Poznan University of Medical Sciences, Poznan, Poland. Electronic address:

The extensive use of plastics in modern dentistry, including oral care products and dental materials, has raised significant concerns due to the increasing evidence of potential harm to human health and the environment caused by the unintentional release of microplastics (MPs) and nanoplastics (NPs). Particles from sources like toothpaste, toothbrushes, orthodontic implants, and denture materials are generated through mechanical friction, pH changes, and thermal fluctuations. These processes cause surface stress, weaken material integrity, and induce wear, posing health risks such as exposure to harmful monomers and additives, while contributing to environmental contamination.

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Generating barcodes for nanopore sequencing data with PRO.

Fundam Res

July 2024

Research Center for Mathematics and Interdisciplinary Sciences, Frontiers Science Center for Nonlinear Expectations (Ministry of Education), Shandong University, Shandong 266000, China.

DNA barcodes, short and unique DNA sequences, play a crucial role in sample identification when processing many samples simultaneously, which helps reduce experimental costs. Nevertheless, the low quality of long-read sequencing makes it difficult to identify barcodes accurately, which poses significant challenges for the design of barcodes for large numbers of samples in a single sequencing run. Here, we present a comprehensive study of the generation of barcodes and develop a tool, PRO, that can be used for selecting optimal barcode sets and demultiplexing.

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Mediterranean seagrasses provide essential coastal protection under climate change.

Sci Rep

December 2024

Instituto Español de Oceanografía, Centro Oceanográfico de Baleares (IEO-CSIC), Palma, Spain.

Seagrasses are vital in coastal areas, offering crucial ecosystem services and playing a relevant role in coastal protection. The decrease in the density of Mediterranean seagrasses over recent decades, due to warming and anthropogenic stressors, may imply a serious environmental threat. Here we quantify the role of coastal impact reduction induced by seagrass presence under present and future climate.

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Reduction of microbial load in soil by gas generated using non-thermal atmospheric pressure plasma.

J Hazard Mater

November 2024

Plasma Bioscience Research Center, Department of Plasma-Bio Display, Kwangwoon University, Seoul 01897, South Korea; Department of Electrical and Biological Physics, Kwangwoon University, Seoul 01897, South Korea. Electronic address:

Article Synopsis
  • Elevating microbial loads in soil from organic waste contamination can lead to new soil-borne pathogens and disruptions in nutrient cycling.
  • Atmospheric-pressure non-thermal plasma gas was tested and found to inactivate over 90% of bacterial cells and fungal spores in treated samples, significantly reducing microbial presence.
  • Plasma treatment also improved soil fertility, boosting spinach plant growth and nitrate levels, while only slightly affecting microbial diversity, suggesting it could be an effective soil sanitation method.
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Conformation Influences Biological Fates of Peptide-Based Nanofilaments by Modulating Protein Adsorption and Interfilament Entanglement.

Adv Mater

November 2024

State Key Laboratory of Drug Research & Center of Pharmaceutics, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China.

Filamentous structures exert biological functions mediated by multivalent interactions with their counterparts in sharp contrast with spherical ones. The physicochemical properties and unique behaviors of nanofilaments that are associated with multivalent interaction with protein are poorly understood. Here, peptide-based nanofilaments containing different homotetrapeptidic inserts are reported and their protein adsorption and biological fates are tested.

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In this study, the removal performances of a multi-pollutant elimination cartridge system (MPECS) composed of palm shell waste-based activated carbon (PSAC), magnesium (Mg)/silicon (Si)-doped PSAC (Mg/Si-PSAC), and silver (Ag)-doped PSAC (Ag-PSAC) for heavy metals, organic pollutants, and were investigated. Mg/Si impregnation significantly improved heavy metal removal using PSAC by increasing the surface area and adding more sorption sites to the magnesium silicate nanolayer. Fixed-bed column experiments showed that the MPECS column outperformed PSAC and commercial activated carbon (DJAC), with a 1.

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We have used multiple sequencing approaches to sequence the genome of a volunteer from Saudi Arabia. We use the resulting data to generate a de novo assembly of the genome, and use different computational approaches to refine the assembly. As a consequence, we provide a contiguous assembly of the complete genome of an individual from Saudi Arabia for all chromosomes except chromosome Y, and label this assembly KSA001.

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Background: Recently, atmospheric non-thermal plasma jet-treated medium (PTM) has been recognized as a novel strategy in cancer therapy and lymphocyte activation. However, PTM has limitations in inducing a robust antitumor-immune response. This study demonstrated that PTM treatment inhibited tumor progression by activating dendritic cells (DCs).

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Structural basis for the reaction cycle and transport mechanism of human Na-sulfate cotransporter NaS1 (SLC13A1).

Sci Adv

November 2024

Ministry of Education Key Laboratory of Protein Science, Tsinghua-Peking Center for Life Sciences, Beijing Advanced Innovation Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China.

Sulfate (SO) is a pivotal inorganic anion with essential roles in mammalian physiology. NaS1, a member of solute carrier 13 family and divalent anion/sodium symporter family, functions as a Na-sulfate cotransporter, facilitating sulfate (re)absorption across renal proximal tubule and small intestine epithelia. While previous studies have linked several human disorders to mutations in the gene, its transport mechanism remains unclear.

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Microplastics: The imperative influencer in blueprint of blue economy.

J Environ Manage

December 2024

School of Biotechnology, KIIT University, Bhubaneswar, Odisha, 751024, India. Electronic address:

The burgeoning issue of microplastic pollution in marine ecosystems has emerged as a significant concern, presently multifaceted difficulty to the sustainability and prosperity of the blue economy. This review examines the intricate link between microplastics (MPs) and the blue economy (BE), exploring how microplastics infiltrate marine environments, their persistence, and their impacts on economic activities reliant on healthy oceans in a global scenario. Diminished seafood quality and quantity, degraded coastal aesthetics affecting tourism revenues, and increased operational costs due to fouling and contamination are among the economic repercussions identified.

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Inactivation of Pseudovirus Expressing the D614G Spike Protein Mutation using Nitric Oxide-Plasma Activated Water.

Adv Sci (Weinh)

December 2024

Department of Electrical and Biological Physics, Plasma Bioscience Research Center, Kwangwoon University, Seoul, 01897, South Korea.

Variants of concern (VOCs) of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) exhibit high infectivity due to mutations, particularly in the spike protein, that facilitate enhanced binding of virus to human angiotensin-converting enzyme 2 (hACE2). The D614G mutation, situated in S1-domain, promotes the open conformation of spike protein, augmenting its interaction with hACE2. Activated water neutralizes pathogens by damaging biological molecules; however, its effect on mutated SARS-CoV-2 or VOCs requires further exploration.

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TDFPS-Designer: an efficient toolkit for barcode design and selection in nanopore sequencing.

Genome Biol

November 2024

Research Center for Mathematics and Interdisciplinary Sciences, Shandong University, Qingdao, 266237, China.

Oxford Nanopore Technologies (ONT) offers ultrahigh-throughput multi-sample sequencing but only provides barcode kits that enable up to 96-sample multiplexing. We present TDFPS-Designer, a new toolkit for nanopore sequencing barcode design, which creates significantly more barcodes: 137 with a length of 20 base pairs, 410 at 24 bp, and 1779 at 30 bp, far surpassing ONT's offerings. It includes GPU-based acceleration for ultra-fast demultiplexing and designs robust barcodes suitable for high-error ONT data.

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