745 results match your criteria: "BioResource Research Center[Affiliation]"

Article Synopsis
  • * Our analysis indicated migration patterns of these subspecies across Eurasia, especially revealing significant population reductions during migration, particularly in M. musculus from Korea and Japan.
  • * A specific genetic change (C>T polymorphism at site 302) was linked to darker fur in some subspecies, but variations in fur color suggest other genetic factors are also at play; ancient gene flow between subspecies was confirmed through sequence comparisons.
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Xenograft of human pluripotent stem cell-derived cardiac lineage cells on zebrafish embryo heart.

Biochem Biophys Res Commun

September 2023

Department of Science of Technology Innovation, Nagaoka University of Technology, 1603-1 Kamitomioka, Nagaoka, Niigata, 940-2188, Japan; Department of Materials Science and Bioengineering, Nagaoka University of Technology, 1603-1 Kamitomioka, Nagaoka, Niigata, 940-2188, Japan. Electronic address:

Cardiomyocytes derived from human induced pluripotent stem cells (hiPSCs) are a promising cell source for regenerative medicine and drug discovery. However, the use of animal models for studying human cardiomyocytes derived from hiPSCs in vivo is limited and challenging. Given the shared properties between humans and zebrafish, their ethical advantages over mammalian models, and their immature immune system that is rejection-free against xenografted human cells, zebrafish provide a suitable alternative model for xenograft studies.

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Greb1 Transiently Accelerates Pancreatic β-Cell Proliferation in Diabetic Mice Exposed to Estradiol.

Am J Pathol

August 2023

Diabetes and Genes, Advanced Medical Initiatives, Graduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.

Decrease of pancreatic β cells leads to diabetes. In an inducible cAMP early suppressor (ICER-Iγ) transgenic mouse model of severe type 2 diabetes with reduced insulin production and depleted β cells, supplementation with high concentrations of 17β-estradiol (E2) markedly enhances β-cell proliferation and normalizes glucose levels. The current study explored the underlying mechanisms leading to a dynamic increase of β cells and pathologic changes in diabetic mice exposed to E2.

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Isolation and Genomic Analysis of 3-Chlorobenzoate-Degrading Bacteria from Soil.

Microorganisms

June 2023

Department of Environment and Energy Systems, Graduate School of Science and Technology, Shizuoka University, 3-5-1 Johoku, Naka-ku, Hamamatsu 432-8561, Japan.

The compound 3-chlorobenzoate (3-CBA) is a hazardous industrial waste product that can harm human health and the environment. This study investigates the physiological and genetic potential for 3-chlorobenzoate (3-CBA) degradation. Six 3-CBA Gram-negative degraders with different degradation properties belonging to the genera , and were isolated from the soil.

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Magnetosome-producing microorganisms can sense and move toward the redox gradient and have been extensively studied in terrestrial and shallow marine sediment environments. However, given the difficulty of sampling, magnetotactic bacteria (MTB) are poorly explored in deep-sea hydrothermal fields. In this study, a deep-sea hydrothermal vent chimney from the Southern Mariana Trough was collected using a remotely operated submersible.

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Background: Placenta accreta spectrum (PAS) disorder is a major cause of postpartum hemorrhage-associated maternal and fetal death, and novel methods for PAS screening are urgently needed for clinical application.

Methods: The purpose of this study was to develop new methods for PAS screening using serum biomarkers and clinical indicators. A total of 95 PAS cases and 137 controls were enrolled in a case-control study as cohort one, and 44 PAS cases and 35 controls in a prospective nested case-control study were enrolled as cohort two.

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Wild-derived mouse strains have been extensively used in biomedical research because of the high level of inter-strain polymorphisms and phenotypic variations. However, they often show poor reproductive performance and are difficult to maintain by conventional in vitro fertilization and embryo transfer. In this study, we examined the technical feasibility of derivation of nuclear transfer embryonic stem cells (ntESCs) from wild-derived mouse strains for their safe genetic preservation.

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Restoring tumor immunogenicity with dendritic cell reprogramming.

Sci Immunol

July 2023

Molecular Medicine and Gene Therapy, Lund Stem Cell Centre, Lund University, BMC A12, 221 84 Lund, Sweden.

Decreased antigen presentation contributes to the ability of cancer cells to evade the immune system. We used the minimal gene regulatory network of type 1 conventional dendritic cells (cDC1) to reprogram cancer cells into professional antigen-presenting cells (tumor-APCs). Enforced expression of the transcription factors PU.

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Unlabelled: Resistance to immune checkpoint blockade remains challenging in patients with non-small cell lung cancer (NSCLC). Tumor-infiltrating leukocyte (TIL) quantity, composition, and activation status profoundly influence responsiveness to cancer immunotherapy. This study examined the immune landscape in the NSCLC tumor microenvironment by analyzing TIL profiles of 281 fresh resected NSCLC tissues.

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Article Synopsis
  • DExH-box helicases, involved in unwinding RNA and DNA, include genes like DHX30, which is linked to neurodevelopmental disorders; DHX9's variants have not been widely associated with such disorders until now.
  • A new report highlights a patient with a de novo missense variant in DHX9 linked to short stature, intellectual disability, and a heart condition, with the variant located in the ATP-binding site.
  • Experiments with Drosophila and gene-editing in mice demonstrate that loss-of-function variants in DHX9 can lead to neurodevelopmental issues, supporting its role in these conditions.
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sp. nov. and sp. nov., two novel halophilic actinobacteria isolated from halophytes.

Int J Syst Evol Microbiol

June 2023

Department of Microbiology, Faculty of Science, Kasetsart University, Chatuchak, Bangkok 10900, Thailand.

A polyphasic approach was used to describe two halophilic actinobacterial strains, designated LSu2-4 and RSe5-2, which were isolated from halophytes [ (L.) Dum. and (L.

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Eusocial bees (such as honey bees and bumble bees) harbor core gut microbiomes that are transmitted through social interaction between nestmates. Carpenter bees are not eusocial; however, recent microbiome analyses found that species harbor distinctive core gut microbiomes. In this study, we analyzed the gut microbiomes of three species in Japan between 2016 and 2021 by V1 to V2 region-based 16S rDNA amplicon sequencing, and 14 candidate novel species were detected based on the full-length 16S rRNA gene sequences.

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Transconjugant range of PromA plasmids in microbial communities is predicted by sequence similarity with the bacterial host chromosome.

Microb Genom

June 2023

Department of Environment and Energy Systems, Graduate School of Science and Technology, Shizuoka University, 3-5-1, Johoku, Naka-ku, Hamamatsu, Shizuoka 432-8561, Japan.

Nucleotide sequence similarity, including -mer plasmid composition, has been used for prediction of plasmid evolutionary host range, representing the hosts in which a plasmid has replicated at some point during its evolutionary history. However, the relationships between the bacterial taxa of experimentally identified transconjugants and the predicted evolutionary host ranges are poorly understood. Here, four different PromA group plasmids showing different -mer compositions were used as model plasmids.

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SINE RNA of the imprinted miRNA clusters mediates constitutive type III interferon expression and antiviral protection in hemochorial placentas.

Cell Host Microbe

July 2023

Department of Molecular Pharmacology & Physiology, Morsani College of Medicine, University of South Florida, Tampa, FL 33612, USA; USF Heart Institute, University of South Florida, Tampa, FL 33602, USA. Electronic address:

Hemochorial placentas have evolved defense mechanisms to prevent the vertical transmission of viruses to the immunologically underdeveloped fetus. Unlike somatic cells that require pathogen-associated molecular patterns to stimulate interferon production, placental trophoblasts constitutively produce type III interferons (IFNL) through an unknown mechanism. We demonstrate that transcripts of short interspersed nuclear elements (SINEs) embedded in miRNA clusters within the placenta trigger a viral mimicry response that induces IFNL and confers antiviral protection.

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The natural antimicrobial peptide Polybia-MP1 is a promising candidate for developing new treatment therapy for infection and cancer. It showed broad-spectrum antimicrobial and anticancer activity with high safety on healthy cells. However, previous sequence modification usually resulted in at least one of two consequences: a notable increase in hemolytic activity or a considerable decrease in activity against Gram-negative bacteria and cancer cells.

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Article Synopsis
  • - The study presents the first specific reference ranges for electrocardiography (ECG) in laboratory mice, derived from a large dataset of over 26,000 C57BL/6N mice grouped by age and sex.
  • - It finds that factors like sex and age have minimal impact on key ECG metrics, while anesthesia significantly reduces heart rate.
  • - The reference ranges established for C57BL/6N mice appear applicable to various other mouse strains, providing a crucial resource for research involving cardiac function in experimental settings.
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An endophytic actinobacterium, designated strain PLAI 1-29, was isolated from the root tissue of collected from Pathum Thani province, Thailand. Strain PLAI 1-29 was characterized using a polyphasic taxonomic approach. It typically exhibited morphological and chemotaxonomic properties of the genus .

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Strigolactones in Rhizosphere Communication: Multiple Molecules With Diverse Functions.

Plant Cell Physiol

September 2023

Division of Biological Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Nara, 630-0192 Japan.

Strigolactones (SLs) are root-secreted small molecules that influence organisms living in the rhizosphere. While SLs are known as germination stimulants for root parasitic plants and as hyphal branching factors for arbuscular mycorrhizal fungi, recent studies have also identified them as chemoattractants for parasitic plants, sensors of neighboring plants and key players in shaping the microbiome community. Furthermore, the discovery of structurally diverged SLs, including so-called canonical and non-canonical SLs in various plant species, raises the question of whether the same SLs are responsible for their diverse functions 'in planta' and the rhizosphere or whether different molecules play different roles.

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A novel actinobacterium, designated strain SMC 277T, was isolated from the clay soil in paddy field of Chonburi Province, Thailand, and characterized using polyphasic taxonomy. Strain SMC 277T formed straight chains of nonmotile cylindrical spores with smooth surface developed on aerial mycelia. The typical chemotaxonomic properties of members of the genus Streptomyces were observed in strain SMC 277T, e.

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sp. nov. and sp. nov.: two new endophytic actinobacteria isolated from the roots of Lindl.

Int J Syst Evol Microbiol

May 2023

Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand.

Two endophytic actinobacteria, designated as strains 7R015 and 7R016, were isolated from the roots of collected in Thailand. The morphological characteristics and results of chemotaxonomic studies and 16S rRNA gene analysis indicated that both strains represented members of the genus . They contained ll-diaminopimelic acid in the peptidoglycan.

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To quantify the biases introduced during human gut microbiome studies, analyzing an artificial mock community as the reference microbiome is indispensable. However, there are still limited resources for a mock community which well represents the human gut microbiome. Here, we constructed a novel mock community comprising the type strains of 18 major bacterial species in the human gut and assessed the influence of experimental and bioinformatics procedures on the 16S rRNA gene and shotgun metagenomic sequencing.

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sp. nov., isolated from Stegodon Sea Cave in Thailand.

Int J Syst Evol Microbiol

May 2023

Microbial Diversity and Utilization Research Team, Thailand Bioresource Research Center (TBRC), National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Pathumthani 12120, Thailand.

Article Synopsis
  • * Phylogenetic analysis shows that BC00092 is closely related to two known strains but has sufficient genetic differences to be considered a new species.
  • * Due to its unique genetic characteristics, BC00092 is proposed as a novel species within its genus, named sp. nov., with strain BC00092 being the type strain.
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The shh limb enhancer is activated in patterned limb regeneration but not in hypomorphic limb regeneration in Xenopus laevis.

Dev Biol

August 2023

Department of Biochemistry and Molecular Biology, Faculty of Agriculture and Life Science, Hirosaki University, 3 Bunkyo-cho, Hirosaki, Aomori, 036-8561, Japan. Electronic address:

Xenopus young tadpoles regenerate a limb with the anteroposterior (AP) pattern, but metamorphosed froglets regenerate a hypomorphic limb after amputation. The key gene for AP patterning, shh, is expressed in a regenerating limb of the tadpole but not in that of the froglet. Genomic DNA in the shh limb-specific enhancer, MFCS1 (ZRS), is hypermethylated in froglets but hypomethylated in tadpoles: shh expression may be controlled by epigenetic regulation of MFCS1.

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UHRF1 is essential for proper cytoplasmic architecture and function of mouse oocytes and derived embryos.

Life Sci Alliance

August 2023

Division of Epigenomics and Development, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan

Ubiquitin-like with PHD and RING finger domains 1 (UHRF1) is a protein essential for the maintenance of DNA methylation in somatic cells. However, UHRF1 is predominantly localized in the cytoplasm of mouse oocytes and preimplantation embryos, where it may play a role unrelated to the nuclear function. We herein report that oocyte-specific KO results in impaired chromosome segregation, abnormal cleavage division, and preimplantation lethality of derived embryos.

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Associations between IGFBP1 gene polymorphisms and the risk of preeclampsia and fetal growth restriction.

Hypertens Res

September 2023

Department of Obstetrics and Gynecology, Center for Reproductive Medicine/Department of Fetal Medicine and Prenatal Diagnosis/BioResource Research Center, Guangdong Provincial Key Laboratory of Major Obstetric Diseases, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, 510150, China.

IGFBP1 plays a critical role in the pathogenesis of preeclampsia (PE), but the association between single nucleotide polymorphism (SNP) of IGFBP1 gene and PE susceptibility has not yet been determined. In our study, 229 women with PE and 361 healthy pregnant (non-PE) women were enrolled to investigate its association via TaqMan genotyping assay. In addition, the protein levels of IGFBP1 under different genotypes were explored by ELISA and IHC.

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