The role of fluid wall association on adsorption of chain molecules at functionalized surfaces: a density functional approach.

We present a density functional theory to describe adsorption in systems where selected segments of chain molecules of fluids can bond (or associate) with functional groups attached to the surfaces. Association of active segments with the surface is modeled within the framework of the first-order thermodynamic perturbation theory. We discuss the influence of several parameters such as the density of surface active sites, the energy of association, the chain length, and the number of the active segment in the chain molecule on the structure of the fluid adjacent to the wall.

Engineering of Pichia pastoris for improved production of antibody fragments.

The methylotrophic yeast Pichia pastoris has been used for the expression of many proteins, including antibody fragments. However, limitations became obvious especially when secreting heterodimeric Fab fragments. Up-to-date, antibody fragments have only been expressed under control of the strong inducible alcohol oxidase 1 (AOX1) promoter, which may stress the cells by excessive transcription.

The applicability of Fourier transform infrared (FT-IR) spectroscopy in waste management.

State and stability or reactivity of waste materials are important properties that must be determined to obtain information about the future behavior and the emission potential of the materials. Different chemical and biological parameters are used to describe the stage of organic matter in waste materials. Fourier transform infrared spectroscopy provides information about the chemistry of waste materials in a general way.

Exploring the ESCRTing machinery in eukaryotes.

The profile of protein sorting into multivesicular bodies (MVBs) has risen recently with the identification of three heteromeric complexes known as ESCRT-I,-II,-III (Endosomal Sorting Complex Required for Transport). Genetic analyses in yeast have identified up to 15 soluble class E VPS (vacuolar protein sorting) proteins that have been assigned to the ESCRT machinery and function in cargo recognition and sorting, complex assembly, vesicle formation and dissociation. Despite their functional importance in yeast and mammalian cells, little is known about their presence and function in other organisms including plants.

The ability to detoxify the mycotoxin deoxynivalenol colocalizes with a major quantitative trait locus for Fusarium head blight resistance in wheat.

We investigated the hypothesis that resistance to deoxynivalenol (DON) is a major resistance factor in the Fusarium head blight (FHB) resistance complex of wheat. Ninety-six double haploid lines from a cross between 'CM-82036' and 'Remus' were examined. The lines were tested for DON resistance after application of the toxin in the ear, and for resistances to initial infection and spread of FHB after artificial inoculation with Fusarium spp.

Changes in carbon and nitrogen pool during in-situ aeration of old landfills under varying conditions.

Emissions from old landfills via leachate and the gas phase are influenced by state and stability of the organic matter in the solid waste and by environmental conditions within the landfill. Remediation of landfills by means of in-situ aeration is one possibility to reduce these emissions. By establishing aerobic conditions, biological processes in the landfill are accelerated.

The GATA factor AreA regulates localization and in vivo binding site occupancy of the nitrate activator NirA.

The GATA factor AreA is a wide-domain regulator in Aspergillus nidulans with transcriptional activation and chromatin remodelling functions. AreA interacts with the nitrate-specific Zn(2)-C(6) cluster protein NirA and both proteins cooperate to synergistically activate nitrate-responsive genes. We have previously established that NirA in vivo DNA binding site occupancy is AreA dependent and in this report we provide a mechanistic explanation for our previous findings.

Simultaneous determination of type A-& B-trichothecenes and zearalenone in cereals by High Performance Liquid Chromatography - Tandem Mass Spectrometry.

A rapid quantitative method for the simultaneous determination of the majorFusarium mycotoxins nivalenol, deoxynivalenol, fusarenon-X, 3-acetyl-deoxynivalenol, 15-acetyl-deoxynivalenol, diacetoxyscirpenol, HT-2 toxin, T-2 toxin and zearalenone in maize and wheat was developed. Raw extracts (acetonitrile/water 84/16) are cleaned-up with MycoSep(®) columns., Chromatographic separation and end determination is carried out by HPLC-APCI-MS/MS.

Quantification of long chain polyunsaturated fatty acids by gas chromatography. Evaluation of factors affecting accuracy.

The accurate and reproducible analysis of long-chain polyunsaturated fatty acids (PUFA) is of growing importance. Especially for labeling purposes, clear guidelines are needed in order to achieve optimum accuracy. Since calibration standards cannot be used for method validation due to the instability of PUFAs, there is no direct way to check for the absence of systematic errors.

Role of the main access channel of catalase-peroxidase in catalysis.

Catalase-peroxidases (KatG) are bifunctional heme peroxidases with an overwhelming catalatic activity. The structures show that the buried heme b is connected to the exterior of the enzyme by a main channel built up by KatG-specific loops named large loop LL1 and LL2, the former containing the highly conserved sequence Met-Gly-Leu-Ile-Tyr-Val-Asn-Pro-Glu-Gly. LL1 residues Ile248, Asn251, Pro252, and Glu253 of KatG from Synechocystis are the focus of this study because of their exposure to the solute matrix of the access channel.

Peroxynitrite efficiently mediates the interconversion of redox intermediates of myeloperoxidase.

Nitric oxide-derived oxidants (e.g., peroxynitrite) are believed to participate in antimicrobial activities as part of normal host defenses but also in oxidative tissue injury in inflammatory disorders.

The potential of flow-through microdialysis for probing low-molecular weight organic anions in rhizosphere soil solution.

In this paper, flow-through microdialysis is presented as a novel analytical tool for automatic sampling of low molecular weight organic anions (LMWOA), such as oxalate and citrate, in solid samples of environmental concern. The microsampling methodology involves the implantation of dedicated capillary-type probes offering unrivalled spatial resolution (ca. 200μm) in definite soil sites.

The role of plant uptake on the removal of organic matter and nutrients in subsurface flow constructed wetlands: a simulation study.

Plants in constructed wetlands have several functions related to the treatment processes. It is generally agreed that nutrient uptake is a minor factor in constructed wetlands treating wastewater compared to the loadings applied. For low loaded systems plant uptake can contribute a significant amount to nutrient removal.

Ultra-trace analysis of platinum in human tissue samples.

Background levels of platinum were determined in human autopsy tissues taken from five individuals. The investigated specimens were lung, liver and kidney. Sample preparation involved microwave digestion followed by an open vessel treatment.

Evaluating visitor-monitoring techniques: a comparison of counting and video observation data.

Two visitor-monitoring methods, video monitoring and counts by human observers, were compared in order to identify and evaluate their respective advantages and disadvantages. The analysis considered user numbers, user type (walkers, dog walkers, bicyclists, and joggers) and group size of visitors. Remarkable differences were found between the two methods for user type and use levels.

Effect of morphological properties of transferred embryonic stages on tubal migration Implications for in vivo culture in the bovine oviduct.

In cattle, there is no practical method, which allows tubal transfer of pre-implantation embryos for routine in vivo culture as it has been established in sheep. The aim of our study was to perform tubal transfer by transvaginal endoscopy in synchronized heifers, in order to expose embryos at various embryonic stages to the physiological mechanisms of migration in the non-ligated oviducts. Various embryonic stages were transferred by transvaginal endoscopy into the oviducts of temporary recipients and were recovered on Day 7.

Intrafallopian transfer of gametes and early stage embryos for in vivo culture in cattle.

It may be possible to avoid inadequate in vitro culture conditions by incubating gametes or embryos in the oviducts for a short time. Ideally, an optimized procedure should be devised, combining in vitro and in vivo systems, in order to achieve synchronization in cattle. We transferred gametes as well as embryos in various stages of development and placed them into the oviducts.

Role of the covalent glutamic acid 242-heme linkage in the formation and reactivity of redox intermediates of human myeloperoxidase.

In human myeloperoxidase the heme is covalently attached to the protein via two ester linkages between the carboxyl groups of Glu242 and Asp94 and modified methyl groups on pyrrole rings A and C of the heme as well as a sulfonium ion linkage between the sulfur atom of Met243 and the beta-carbon of the vinyl group on pyrrole ring A. In the present study, wild-type recombinant myeloperoxidase (recMPO) and the variant Glu242Gln were produced in Chinese hamster ovary cells and investigated in a comparative sequential-mixing stopped-flow study in order to elucidate the role of the Glu242-heme ester linkage in the individual reaction steps of both the halogenation and peroxidase cycle. Disruption of the ester bond increased heme flexibility, blue shifted the UV-vis spectrum, and, compared with recMPO, decelerated cyanide binding (1.

Standard reduction potentials of all couples of the peroxidase cycle of lactoperoxidase.

Lactoperoxidase (LPO) is found in mucosal surfaces and exocrine secretions including milk, tears and saliva and has physiological significance in antimicrobial defense. Its predominant physiological role is to convert hydrogen peroxide and thiocyanate in hypothiocyanite. In this study, the standard reduction potentials of all redox couples involved in the halogenation and peroxidase cycle of LPO have been determined by multi-mixing stopped-flow spectroscopy.

Photodegradation of phosphonates in water.

Phosphonates are widely used as chelating agents, e.g., in water cooling systems, in bleaching baths or as scale inhibitors in deflocculation agents.

Ecological Sanitation--a way to solve global sanitation problems?

Today about 2.4 billion people in rural and urban areas do not have access to adequate sanitation services. Within 20 years, it is expected that an additional 2 billion will live in towns and cities, mainly in developing countries, demanding sanitation.

Exploitation of convenience food in view of a diet diversification for better nutrition.

Social and economic changes as well as technological innovations in recent years, have caused dramatic changes regarding the kind of nutrition supply observed. The provoking question now is, if a recommendable nutrition and diet diversification is possible with the convenience products available on the market at present. Depending on the degree of cooking or preparation the following convenience steps can be differentiated: initial grade--ready-for-kitchen processing--ready-to-cook--ready-to-mix--ready-to-heat--ready-to-eat.

Metabolically independent and accurately adjustable Aspergillus sp. expression system.

Filamentous fungi are well-established expression hosts often used to produce extracellular proteins of use in the food and pharmaceutical industries. The expression systems presently used in Aspergillus species rely on either strong constitutive promoters, e.g.

In-line river monitoring--new challenges and opportunities.

Water management becomes a complex issue when considering the large number of water-rights-of-use like drinking water production, recreation, receiving water, transport on and ecological quality of the water bodies. Recent changes in the legal requirements concerning water management on European scale (EC Water Framework Directive, 2000/60/EC) highlighted the need for appropriate means for monitoring water quality and exchange of water quality data. Indirect measurement of water quality using surrogate parameters (chemical and physical-chemical parameters) can be automated at a high accuracy level.

Time-resolved delta spectrometry: a method to define alarm parameters from spectral data.

Alarm parameters are in many ways different from measurements of well defined chemical substances. Being confronted with an increasing number of potentially harmful compounds as well as financial and logistic constraints, new variables (such as alarm parameters) that allow for an integrated assessment or for a first screening can be a solution. To monitor for surrogate or aggregate variables can be a useful strategy to overcome some of the constraints.