Looking for the needle in a downsized haystack: Whole-exome sequencing unravels genomic signals of climatic adaptation in Douglas-fir ().

Conifers often occur along steep gradients of diverse climates throughout their natural ranges, which is expected to result in spatially varying selection to local climate conditions. However, signals of climatic adaptation can often be confounded, because unraveled clines covary with signals caused by neutral evolutionary processes such as gene flow and genetic drift. Consequently, our understanding of how selection and gene flow have shaped phenotypic and genotypic differentiation in trees is still limited.

Evidence for Glacial Refugia of the Forest Understorey Species (Ranunculaceae) in the Southern as Well as in the Northern Limestone Alps.

Glacial refugia of alpine and subnival biota have been intensively studied in the European Alps but the fate of forests and their understory species in that area remains largely unclear. In order to fill this gap, we aimed at disentangling the spatiotemporal diversification of disjunctly distributed black hellebore (Ranunculaceae). We applied a set of phylogeographic analyses based on restriction-site associated DNA sequencing (RADseq) data and plastid DNA sequences to a range-wide sampling of populations.

The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species.

Background: Progress in the field of evolutionary forest ecology has been hampered by the huge challenge of phenotyping trees across their ranges in their natural environments, and the limitation in high-resolution environmental information.

Findings: The GenTree Platform contains phenotypic and environmental data from 4,959 trees from 12 ecologically and economically important European forest tree species: Abies alba Mill. (silver fir), Betula pendula Roth.

mGEODAR-A Mobile Radar System for Detection and Monitoring of Gravitational Mass-Movements.

Radar measurements of gravitational mass-movements like snow avalanches have become increasingly important for scientific flow observations, real-time detection and monitoring. Independence of visibility is a main advantage for rapid and reliable detection of those events, and achievable high-resolution imaging proves invaluable for scientific measurements of the complete flow evolution. Existing radar systems are made for either detection with low-resolution or they are large devices and permanently installed at test-sites.

Climatic oscillations in Quaternary have shaped the co-evolutionary patterns between the Norway spruce and its host-associated herbivore.

During the Last Glacial Maximum in the Northern Hemisphere, expanding ice sheets forced a large number of plants, including trees, to retreat from their primary distribution areas. Many host-associated herbivores migrated along with their host plants. Long-lasting geographic isolation between glacial refugia could have been led to the allopatric speciation in separated populations.

Occurrence of apomictic conspecifics and ecological preferences rather than colonization history govern the geographic distribution of sexual .

The geographic distribution of sexual-apomictic taxa (i.e., comprising individuals usually reproducing either sexually or asexually via seeds) is traditionally thought to be driven by their ecological preferences and colonization histories.

Author Correction: The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe.

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

North American Douglas-fir (. in Europe: establishment and reproduction within new geographic space without consequences for its genetic diversity.

Genetic admixture and plasticity along with propagule pressure, large seed dispersal distances and fast adaptation support successful establishment and spread of introduced species outside their native range. Consequently, introductions may display climatic niche shifts in the introduced range. Douglas-fir, a controversial forest and ornamental conifer represented by two ecologically different and hybridising varieties, was transferred multiple times outside the native range in North America.

The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe.

The dataset presented here was collected by the GenTree project (EU-Horizon 2020), which aims to improve the use of forest genetic resources across Europe by better understanding how trees adapt to their local environment. This dataset of individual tree-core characteristics including ring-width series and whole-core wood density was collected for seven ecologically and economically important European tree species: silver birch (Betula pendula), European beech (Fagus sylvatica), Norway spruce (Picea abies), European black poplar (Populus nigra), maritime pine (Pinus pinaster), Scots pine (Pinus sylvestris), and sessile oak (Quercus petraea). Tree-ring width measurements were obtained from 3600 trees in 142 populations and whole-core wood density was measured for 3098 trees in 125 populations.

Relative genome size variation in the African agroforestry tree (Fabaceae: Caesalpinioideae) and its relation to geography, population genetics, and morphology.

Variation in genome size and in chromosome number can be linked to genetic, morphological, and ecological characteristics, and thus be taxonomically significant. We screened the relative genome size (RGS) and counted the number of mitotic chromosomes in the African agroforestry tree , a widely distributed savannah species that shows conspicuous morphological clinal variation and strong genetic structure, and tested for linkage of RGS variation to geography, leaf morphology, and population genetic variation. An improved protocol for the preparation of chromosomes was developed.

Difference in reproductive mode rather than ploidy explains niche differentiation in sympatric sexual and apomictic populations of .

Apomicts tend to have larger geographical distributional ranges and to occur in ecologically more extreme environments than their sexual progenitors. However, the expression of apomixis is typically linked to polyploidy. Thus, it is a priori not clear whether intrinsic effects related to the change in the reproductive mode or rather in the ploidy drive ecological differentiation.

Sexual intraspecific recombination but not origin governs the genesis of new apomictic genotypes in (Rosaceae).

Apomixis - asexual reproduction via seeds - might arise following polyploidisation events, or via reproductive transfer of apomixis. Both processes can be obtained within species or via hybridisation. We aimed to determine the origin of apomictic genotypes in , a rosaceous species showing reproductive differentiation with ploidy: sexual tetraploids and apomictic penta- to octoploids, which regularly co-occur in sympatry.

Pollen precedence in sexual and its role as a protective reproductive barrier against apomictic cytotypes.

Cross-pollination is a major factor determining the demographic dynamics of mixed-ploidy populations. Typically, rare cytotypes are suppressed due to reduced female fertility by losing gametes in heteroploid crosses (i.e.

Distribution of nutrients and trace elements in forest soils of Singapore.

Information on chemical fertility status and on trace element concentrations for Singapore soils is sparse. In this study, concentration and distribution of nutrients and trace elements in forest soils of Singapore, and the effect of geology on the current conditions of soils, were evaluated. Litter and mineral soil samples (0-10 cm, 10-20 cm, 20-50 cm) were divided into three groups according to geology (sedimentary rocks, Neogene-Quaternary sediments and igneous rocks).

Crossing borders - European forest reproductive material moving in trade.

Forest reproductive material (FRM) is constantly traded between European countries, but bilateral trade statistics on a European scale are limited. For the first time we analysed national datasets according Council Directiv 1999/105/EC for the tree species Picea abies, Pinus sylvestris, P. pinaster, Fagus sylvatica, Fraxinus excelsior, Quercus robur, Q.

Disentangling the role of climate and soil on tree growth and its interaction with seed origin.

When considering options for adapting forests under climate change, climate is treated as the dominant driver of forest growth, while soil properties are often ignored mainly due to shortage of accurate data. The effects of climate and soil on forest growth may vary due to local adaptation to both climate and soil, and these local adaptations might need to be considered when transferring seed provenances under climate change. Data from 29 provenance trials of Norway spruce (Picea abies (L.

How well can we simulate complex hydro-geomorphic process chains? The 2012 multi-lake outburst flood in the Santa Cruz Valley (Cordillera Blanca, Perú).

Changing high-mountain environments are characterized by destabilizing ice, rock or debris slopes connected to evolving glacial lakes. Such configurations may lead to potentially devastating sequences of mass movements (process chains or cascades). Computer simulations are supposed to assist in anticipating the possible consequences of such phenomena in order to reduce the losses.

Asymmetric reproductive interference: The consequences of cross-pollination on reproductive success in sexual-apomictic populations of (Rosaceae).

Apomixis evolves from a sexual background and usually is linked to polyploidization. Pseudogamous gametophytic apomicts, which require a fertilization to initiate seed development, of various ploidy levels frequently co-occur with their lower-ploid sexual ancestors, but the stability of such mixed populations is affected by reproductive interferences mediated by cross-pollination. Thereby, reproductive success of crosses depends on the difference in ploidy levels of mating partners, that is, on tolerance of deviation from the balanced ratio of maternal versus paternal genomes.

Quality Control of Valerianae Radix by Attenuated Total Reflection Fourier Transform Infrared (ATR-FTIR) Spectroscopy.

(Acetoxy-)valerenic acid and total essential oil content are important quality attributes of pharmacy grade valerian root (Valerianae radix). Traditional analysis of these quantities is time-consuming and necessitates (harmful) solvents. Here we investigated an application of attenuated total reflection Fourier transform infrared spectroscopy for extractionless analysis of these quality attributes on a representative sample comprising 260 wild-crafted individuals covering the Central European taxonomic diversity of the L.

Climate and air pollution impacts on habitat suitability of Austrian forest ecosystems.

Climate change and excess deposition of airborne nitrogen (N) are among the main stressors to floristic biodiversity. One particular concern is the deterioration of valuable habitats such as those protected under the European Habitat Directive. In future, climate-driven shifts (and losses) in the species potential distribution, but also N driven nutrient enrichment may threaten these habitats.

Fourteen simple-sequence repeats newly developed for population genetic studies in Prosopis africana (Fabaceae-Mimosoideae).

Background: There is very limited genetic knowledge in Prosopis africana, an important sub-Saharan multi-purpose tree species. Availability of highly polymorphic genetic markers would be helpful for future genetic work.

Findings: Leaf samples from 15 trees were used to develop simple sequence repeat (SSR) markers.

Simulation of rain enhances horizontal transmission of the microsporidium Nosema lymantriae via infective feces.

Larvae of the gypsy moth, Lymantria dispar, infected with the microsporidium, Nosema lymantriae, release infective spores with feces. We tested the effects of simulated light rain on transmission in cages, providing random contamination of host plant foliage with feces. Contamination by larvae in the intermediate stage of infection, 15-16days post inoculation, entailed transmission to a mean 4.

Population Differentiation in Common Walnut (Juglans regia L.) across Major Parts of Its Native Range-Insights from Molecular and Morphometric Data.

Juglans regia is an economically highly important species for fruit and wood production in the warm temperate and subtropical zones of the Northern Hemisphere. Besides the natural influence of climatic and geomorphological barriers, its genetic structure has been strongly modified by humans and the population history is still unclear. For this reason, we investigated mainly natural walnut populations across the Eurasian continent on a molecular (44 populations, 581 trees) and morphometric level (23 populations, 1391 ripe nuts).