253 results match your criteria: "African institute for Mathematical Sciences[Affiliation]"
Euro Surveill
March 2024
These authors contributed equally.
Since the beginning of 2023, the number of people with suspected monkeypox virus (MPXV) infection have sharply increased in the Democratic Republic of the Congo (DRC). We report near-to-complete MPXV genome sequences derived from six cases from the South Kivu province. Phylogenetic analyses reveal that the MPXV affecting the cases belongs to a novel Clade I sub-lineage.
View Article and Find Full Text PDFFront Public Health
March 2024
Department of Microbiology and Immunology, Dalhousie University, Halifax, NS, Canada.
Introduction: The onset of the COVID-19 pandemic has placed a significant burden on healthcare systems worldwide, particularly in sub-Saharan regions where healthcare resources are limited. The transmission of SARS-CoV-2 is facilitated by the movement of people from place to place. Therefore, implementing measures that restrict movement of people and contacts is crucial in controlling the spread of the disease.
View Article and Find Full Text PDFEcol Evol
March 2024
Department of Applied Mathematics, College of Science Nanjing Forestry University Nanjing China.
The fundamental goal of this research is to suggest a novel mathematical operator for modeling visceral leishmaniasis, specifically the Caputo fractional-order derivative. By utilizing the Fractional Euler Method, we were able to simulate the dynamics of the fractional visceral leishmaniasis model, evaluate the stability of the equilibrium point, and devise a treatment strategy for the disease. The endemic and disease-free equilibrium points are studied as symmetrical components of the proposed dynamical model, together with their stabilities.
View Article and Find Full Text PDFMath Biosci Eng
January 2024
Department of Mathematics and Applied Mathematics, University of the Western Cape, Private Bag X17, Bellville 7535, Republic of South Africa.
The world is aiming to eliminate malaria by 2030. The introduction of the pilot project on malaria vaccination for children in Kenya, Ghana, and Malawi presents a significant thrust to the elimination efforts. In this work, a susceptible, infectious and recovered (SIR) human-vector interaction mathematical model for malaria was formulated.
View Article and Find Full Text PDFAm J Primatol
April 2024
Department of Anthropology, City University of New York (CUNY) Graduate Center, New York, New York, USA.
The urgent need for effective wildlife monitoring solutions in the face of global biodiversity loss has resulted in the emergence of conservation technologies such as passive acoustic monitoring (PAM). While PAM has been extensively used for marine mammals, birds, and bats, its application to primates is limited. Black-and-white ruffed lemurs (Varecia variegata) are a promising species to test PAM with due to their distinctive and loud roar-shrieks.
View Article and Find Full Text PDFCommun Biol
January 2024
Centre for Invasion Biology, Department of Mathematical Sciences, Stellenbosch University, Stellenbosch, 7602, South Africa.
Animal species, encompassing both pollinators and herbivores, exhibit a preference for plants based on optimal foraging theory. Understanding the intricacies of these adaptive plant-animal interactions in the context of community assembly poses a main challenge in ecology. This study delves into the impact of adaptive interaction rewiring between species belonging to different guilds on the structure and stability of a 3-guild ecological network, incorporating both mutualistic and antagonistic interactions.
View Article and Find Full Text PDFPlants (Basel)
December 2023
Bamboo Research Institute, College of Ecology and Environment, Nanjing Forestry University, #159 Longpan Road, Nanjing 210037, China.
In nature, the fruit shapes of many plants resemble avian eggs, a form extensively studied as solids of revolution. Despite this, the hypothesis that egg-shaped fruits are themselves solids of revolution remains unvalidated. To address this, 751 L.
View Article and Find Full Text PDFBMC Public Health
December 2023
Laboratory of Emerging Infectious Diseases, Department of Microbiology and Immunology, Faculty of Medicine, Dalhousie University, Halifax, Canada.
Background: The overall goal of this survey was to understand the knowledge, attitudes, and practices related to the Ebola Virus Disease (EVD) in Rwanda.
Methods: This mixed-method cross-sectional survey was conducted in five selected districts of Rwanda. Quantitative data were collected from 1,010 participants using Kobo Collect Software and the analysis was performed using SPSS and Python software.
Sci Rep
November 2023
Pan Africa Bean Research Alliance- PABRA, International Center for Tropical Agriculture, CIAT, Kigali, Rwanda.
Insect pollinators provide a natural ecosystem service to more than 80% of known flowering plants, many of which are part of our diet. However, their importance in Africa and an agriculture-dependent country like Rwanda has yet to receive attention. This encumbers policy formulation and investments in insect pollinators as a strategic agronomic input.
View Article and Find Full Text PDFNature
December 2023
Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland.
Forests are a substantial terrestrial carbon sink, but anthropogenic changes in land use and climate have considerably reduced the scale of this system. Remote-sensing estimates to quantify carbon losses from global forests are characterized by considerable uncertainty and we lack a comprehensive ground-sourced evaluation to benchmark these estimates. Here we combine several ground-sourced and satellite-derived approaches to evaluate the scale of the global forest carbon potential outside agricultural and urban lands.
View Article and Find Full Text PDFData Brief
December 2023
Department of Physics, Faculty of Science, University of Mauritius, 80837 Réduit, Mauritius.
The present article describes a dataset encompassing model outputs generated by the Weather Research and Forecasting (WRF) regional climate model. A high-resolution (1km) downscaling simulation was performed over two tropical islands, Reunion and Mauritius, situated in the South-West Indian Ocean (SWIO), with initial and boundary conditions provided by the ERA5 reanalysis with a global resolution of 0.25° × 0.
View Article and Find Full Text PDFNat Plants
November 2023
Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland.
Understanding what controls global leaf type variation in trees is crucial for comprehending their role in terrestrial ecosystems, including carbon, water and nutrient dynamics. Yet our understanding of the factors influencing forest leaf types remains incomplete, leaving us uncertain about the global proportions of needle-leaved, broadleaved, evergreen and deciduous trees. To address these gaps, we conducted a global, ground-sourced assessment of forest leaf-type variation by integrating forest inventory data with comprehensive leaf form (broadleaf vs needle-leaf) and habit (evergreen vs deciduous) records.
View Article and Find Full Text PDFiScience
October 2023
Vaccine and Infectious Disease Organization VIDO, University of Saskatchewan, Saskatoon, SK S7N 5E3, Canada.
SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) causing COVID-19 (coronavirus disease 2019) poses a greater health risk to immunocompromized individuals including people living with HIV (PLWH). However, most studies on PLWH have been conducted in higher-income countries. We investigated the post-vaccination antibody responses of PLWH in Rwanda by collecting peripheral blood from participants after receiving a second or third COVID-19 vaccine.
View Article and Find Full Text PDFNature
October 2023
Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland.
Infect Dis Model
December 2023
Epidemiology, Clinical Research and Data Science Unit, Institute Pasteur de Dakar, 220, Dakar, Senegal.
This work addresses the problem of supervised classification for highly correlated high-dimensional data describing non-independent observations to identify SNPs related to a phenotype. We use a general penalized linear mixed model with a single random effect that performs simultaneous SNP selection and population structure adjustment in high-dimensional prediction models. Specifically, the model simultaneously selects variables and estimates their effects, taking into account correlations between individuals.
View Article and Find Full Text PDFPlants (Basel)
August 2023
Bamboo Research Institute, College of Ecology and Environment, Nanjing Forestry University, Nanjing 210037, China.
Measuring the inequality of leaf area distribution per plant (ILAD) can provide a useful tool for quantifying the influences of intra- and interspecific competition, foraging behavior of herbivores, and environmental stress on plants' above-ground architectural structures and survival strategies. Despite its importance, there has been limited research on this issue. This paper aims to fill this gap by comparing four inequality indices to measure ILAD, using indices for quantifying household income that are commonly used in economics, including the Gini index (which is based on the Lorenz curve), the coefficient of variation, the Theil index, and the mean log deviation index.
View Article and Find Full Text PDFActive Inference is a recently developed framework for modeling decision processes under uncertainty. Over the last several years, empirical and theoretical work has begun to evaluate the strengths and weaknesses of this approach and how it might be extended and improved. One recent extension is the "sophisticated inference" (SI) algorithm, which improves performance on multi-step planning problems through a recursive decision tree search.
View Article and Find Full Text PDFNature
September 2023
Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland.
Determining the drivers of non-native plant invasions is critical for managing native ecosystems and limiting the spread of invasive species. Tree invasions in particular have been relatively overlooked, even though they have the potential to transform ecosystems and economies. Here, leveraging global tree databases, we explore how the phylogenetic and functional diversity of native tree communities, human pressure and the environment influence the establishment of non-native tree species and the subsequent invasion severity.
View Article and Find Full Text PDFFront Mol Biosci
July 2023
Department of Oncology and Metabolism, The Medical School, University of Sheffield, Sheffield, United Kingdom.
The capacity of cells to adhere to, exert forces upon and migrate through their surrounding environment governs tissue regeneration and cancer metastasis. The role of the physical contractile forces that cells exert in this process, and the underlying molecular mechanisms are not fully understood. We, therefore, aimed to clarify if the extracellular forces that cells exert on their environment and/or the intracellular forces that deform the cell nucleus, and the link between these forces, are defective in transformed and invasive fibroblasts, and to indicate the underlying molecular mechanism of control.
View Article and Find Full Text PDFPLoS Comput Biol
June 2023
The South African Department of Science and Innovation-National Research Foundation (DSI-NRF) South African Centre for Epidemiological Modelling and Analysis (SACEMA), Stellenbosch University, Stellenbosch, South Africa.
Morphometric analysis of wings has been suggested for identifying and controlling isolated populations of tsetse (Glossina spp), vectors of human and animal trypanosomiasis in Africa. Single-wing images were captured from an extensive data set of field-collected tsetse wings of species Glossina pallidipes and G. m.
View Article and Find Full Text PDFNPJ Biodivers
June 2023
Institute of Botany, Czech Academy of Sciences, Prague, Czech Republic.
Diagnostics (Basel)
April 2023
Research Centre, African Institute for Mathematical Sciences (AIMS) South Africa, Cape Town 7945, South Africa.
This study proposes a deep-learning-based solution (named CapsNetCovid) for COVID-19 diagnosis using a capsule neural network (CapsNet). CapsNets are robust for image rotations and affine transformations, which is advantageous when processing medical imaging datasets. This study presents a performance analysis of CapsNets on standard images and their augmented variants for binary and multi-class classification.
View Article and Find Full Text PDFHeliyon
May 2023
Department of Medical Imaging, School of Medical Sciences, College of Health and Allied Sciences, University of Cape Coast, Cape Coast, Ghana.
Background: The integration of Artificial Intelligence (AI)-based technologies in medicine is advancing rapidly especially in the field of radiology. This however, is at a slow pace in Africa, hence, this study to evaluate the perspectives of Ghanaian radiologists.
Methods: Data for this cross-sectional prospective study was collected between September and November 2021 through an online survey and entered into SPSS for analysis.
PLoS One
March 2023
Department of Medical Imaging, School of Medical Sciences, College of Health and Allied Sciences, University of Cape Coast, Cape Coast, Ghana.
Background: Uterine fibroids are benign tumors that grow in or on the uterus of women. Globally, they occur in more than 80% of women of African ancestry and 70% in white women. Uterine fibroid requires much attention because of its high incidence rate among women of all races and ages.
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