30 results match your criteria: "ANSES-Universite de Lyon[Affiliation]"

causes hospital-acquired infections in human patients with compromised immune system. Strains associated to nosocomial infections are often resistant to carbapenems and belong to few international clones (IC1-11). .

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No genetic link between E. coli isolates carrying mcr-1 in bovines and humans in France.

J Glob Antimicrob Resist

January 2025

Institut National de la Santé et de la Recherche Médicale (UMR 1071), Institut National de la Recherche Agronomique (USC-2018), Université Clermont Auvergne, Clermont-Ferrand, France; Centre National de Référence de la Résistance aux Antibiotiques, Centre Hospitalier Universitaire, Clermont-Ferrand, France.

Background: Colistin is a last-line antibiotic used to treat severe human infections caused by carbapenemase-producing Gram-negative bacteria. In parallel, colistin has massively been used in the veterinary field so that mcr-1-positive E. coli have spread worldwide in livestock, potentially constituting a reservoir of colistin-resistant isolates that can be further transmitted to humans.

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Background: Enterobacter hormaechei is an important pathogen in humans and animals, which, in addition to its intrinsic AmpC, can acquire a wide variety of genes conferring resistances to extended-spectrum cephalosporins (ESCs) and carbapenems (CPs). In France, human clinical outbreaks of E. hormaechei resistant to ESC or carbapenem were reported.

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The gene conferring methicillin-resistance has always been found on a SCC type XI element and is largely restricted to the few clonal complexes CC130, CC1943, CC425, CC49 and CC599. The occurrence of the gene in many different hosts highlighted its One Health importance, even though European hedgehogs () are considered its natural reservoir, most probably because of the selective pressure imposed by beta-lactam-producing dermatophytes () that colonize the skin of these mammals. Surprisingly, while the presence of on the French territory has been proven, no -positive methicillin-resistant  (MRSA) isolate has been reported yet from hedgehogs.

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: and are major opportunistic pathogens in both humans and dogs. In pets, the dissemination of methicillin-resistant isolates (MRSA or MRSP) is problematic for the treatment of animals and is a public health issue due to their zoonotic potential. MRSA and MRSP may also harbor virulent genes that increase their dangerousness.

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Background: 'One Health' initiatives to tackle the rising risk of antimicrobial resistance (AMR) have flourished due to increasing detection of Enterobacterales producing extended-spectrum beta-lactamases (ESBLs) and carbapenemases (CPs).

Objectives: This study aimed to conduct an in-depth holistic analysis of Escherichia coli (Ec) and Klebsiella pneumoniae (Kp) isolates recovered from landfill-foraging white stork faecal samples and clinical isolates from a nearby hospital.

Methods: Faecal samples (n = 211) were collected from storks foraging at two landfills in Spain.

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Dissemination and characterization of Escherichia coli resistant to extended-cephalosporins in feedlot lambs: A two-year two-population study.

Comp Immunol Microbiol Infect Dis

November 2024

Centro de Investigação de Microrganismos, Faculdade de Medicina de São José do Rio Preto (FAMERP), São José do Rio Preto, Brazil. Electronic address:

Article Synopsis
  • The study investigates the spread of antibiotic-resistant E. coli in feedlot lambs, an often-overlooked aspect of One Health concerning antimicrobial resistance in food animals.
  • The researchers sampled lambs, their carcasses, and surrounding mammals, finding a high prevalence of extended-spectrum cephalosporin-resistant genes among the collected E. coli strains.
  • Whole genome sequencing revealed that most resistance genes were on the lambs' chromosomes, though some were on plasmids, indicating both clonal and plasmid-mediated spread of resistance between the animals.
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Animal food products are important sources of zoonotic agents, increasing the risk of exposure to antibiotic-resistant bacteria from farm to fork. Therefore, we aimed to detect and fully characterise Extended-Spectrum Beta-Lactamase (ESBL)-producing E. coli from the poultry sector in a One Health approach.

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Antibiotic resistance genes (ARGs) in can disseminate vertically through successful clones, but also horizontally through the transfer of genes conveyed by mobile genetic elements (MGEs). Even though underexplored, MGE/ARG associations in favor the emergence of multidrug-resistant clones, which are challenging therapeutic success in both human and animal health. This study investigated the interplay between the mobilome and the resistome of more than 10,000 .

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Enterobacterales resistant to extended-spectrum cephalosporins (ESC) are a marker of the antimicrobial resistance (AMR) burden. They are infecting humans, but the intestinal microbiota can also be transiently colonized without developing symptoms. Healthy carriage can promote silent dissemination of resistant bacteria, and data on this colonization are often lacking.

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Global transmission of extended-spectrum cephalosporin resistance in Escherichia coli driven by epidemic plasmids.

EBioMedicine

May 2024

Quadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, United Kingdom; University of East Anglia, Norwich NR4 7TJ, United Kingdom. Electronic address:

Article Synopsis
  • Extended-spectrum cephalosporins (ESCs) are crucial antimicrobials used to combat multidrug-resistant (MDR) bacterial infections, but resistance against them is rising, mainly due to certain β-lactamases produced by Enterobacterales.
  • This study focused on analyzing Escherichia coli strains with resistance genes collected from Canada, France, and Germany over a 14-year period, employing advanced sequencing techniques to examine the transmission of these resistance genes via plasmids.
  • Five distinct plasmid subtypes linked to the spread of ESC resistance genes were identified, with varying prevalence across geographic regions and host species, highlighting the role of plasmid diversity in the global issue of antibiotic resistance.
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Occurrence and persistence of multidrug-resistant Enterobacterales isolated from urban, industrial and surface water in Monastir, Tunisia.

Sci Total Environ

May 2024

Université de Sousse, Faculté de Médecine Ibn Al Jazzar Sousse, Laboratoire de Recherche Biophysique Métabolique et Pharmacologie Appliquée, LR12ES02, Tunisie. Electronic address:

Article Synopsis
  • * In a study conducted in Monastir, Tunisia, despite official monitoring indicating compliant water quality, 31 samples (19.1%) contained ESC-resistant bacteria, with 39 isolates from E. coli, Klebsiella pneumoniae, and Citrobacter freundii identified.
  • * The findings revealed a consistent presence of resistant bacteria across different sites, suggesting that improvements in water quality monitoring could be achieved by including tests for total coliforms and ESBL counts on selective
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The presence of methicillin-resistant or -susceptible S. aureus in pig nostrils has been known for a long time, but the occurrence of extended-spectrum beta-lactamase (ESBL)-producing E. coli has hardly been investigated.

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CTX-M-15/27-positive Escherichia coli and VIM-2-producing Pseudomonas putida in free-living pigeons (Columba livia) in Tunisia.

J Glob Antimicrob Resist

March 2024

Faculté de Médecine Ibn Al Jazzar Sousse, Laboratoire de Recherche Biophysique Métabolique et Pharmacologie Appliquée, Université de Sousse, Sousse, Tunisia.

Objectives: Wild birds are vectors of antimicrobial resistance. Birds living in close contact with humans or other animals, like feral pigeons (Columba livia), might be especially prone to acquire resistance genes such as those encoding extended-spectrum beta-lactamases (ESBLs) and carbapenemases.

Methods: Cloacal samples (n = 206) of free-living feral pigeons (C.

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Article Synopsis
  • - The study examines the Acinetobacter baumannii clonal lineage ST25 in both humans and animals, revealing its global presence and connections through phylogenetic analysis of 141 genomes.
  • - Four distinct clades of ST25 were identified, with two primarily in South America and two in Europe, Asia, and America, showing variations in antibiotic resistance genes, especially OXA-23 carbapenemase.
  • - Findings indicate genomic similarities between drug-resistant ST25 isolates from humans and animals, suggesting possible cross-contamination and emphasizing the need for tracking these bacteria to improve global health strategies.
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Healthcare Equipment and Personnel Reservoirs of Carbapenem-Resistant Epidemic Clones in Intensive Care Units in a Tunisian Hospital.

Microorganisms

October 2023

Laboratoire de Recherche Biophysique Métabolique et Pharmacologie Appliquée, LR12ES02, Faculté de Médecine Ibn Al Jazzar Sousse, Université de Sousse, Sousse 4002, Tunisia.

Carbapenem-resistant (CRAB) strains can cause severe and difficult-to-treat infections in patients with compromised general health. CRAB strains disseminate rapidly in nosocomial settings by patient-to-patient contact, through medical devices and inanimate reservoirs. The occurrence of CRAB in patients residing in the intensive care units (ICUs) of the Sahloul University hospital in Sousse, Tunisia is high.

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European starlings are widespread migratory birds that have already been described as carrying bacteria resistant to extended-spectrum cephalosporins (ESC-R). These birds are well known in Tunisia because they spend the wintertime in this country and are hunted for human consumption. The goal of our study was to estimate the proportion of ESC-R in these birds and to characterize the collected isolates using whole-genome sequencing.

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Resistance to extended-spectrum cephalosporins (ESC) and carbapenems in Enterobacterales is a major issue in public health. Carbapenem resistance in particular is associated with increased morbidity and mortality. Moreover, such resistance is often co-harbored with resistance to non-beta-lactam antibiotics, and pathogens quickly become multi-drug-resistant (MDR).

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Despite the fact that the selective pressure of antibiotics on wild birds is supposed to be very weak, they are considered potential vectors of antimicrobial resistance (AMR). Obligate scavengers such as vultures can present high proportions of resistance to extended-spectrum cephalosporins (ESC) and multi-drug-resistant (MDR) bacteria, partially due to feeding stations that are provisioned with livestock carcasses from intensive farming. Here we investigated whether griffon vultures () from two populations located in the French Alps, which feed on livestock carcasses from extensive farms, may carry such resistant bacteria.

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Article Synopsis
  • This study focused on examining E. coli strains from the cloaca of white stork nestlings to identify those producing extended-spectrum β-lactamases (ESBLs) and to analyze their plasmid content.
  • A total of 113 E. coli isolates were found, with 27 showing multidrug resistance, while only 4.5% of the stork nestlings carried ESBL-producing strains, marked by specific bla genes.
  • The research underscored the mobility of ESBL genes across different plasmids, highlighting their potential to spread within bacterial populations through genetic interchange on a small scale.
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Article Synopsis
  • The study investigates the presence of antimicrobial resistance genes (ARGs) and mobile genetic elements (MGEs) in raw milk cheese samples from sheep and cows in France.
  • Analysis showed that a significant portion of the cheese samples (over 75%) contained ARGs that provide resistance to commonly used antibiotics, while more critical resistance genes were seldom found.
  • The findings suggest that while resistance to basic antibiotics is widespread, the resistance to important last-generation antibiotics is rare, indicating a mixed risk profile in raw milk cheese for antimicrobial resistance.
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Introduction: Colistin-resistance widely disseminated in food-producing animals due to decades of colistin use to treat diarrhea. The plasmid-borne gene has been extensively reported from bovine, swine and chicken worldwide, but smaller productions such as the goat farming sector were much less surveyed.

Methods: We looked for colistin-resistant isolates presenting plasmid-borne genes of the mcr family in both breeding (=80) and fattening farms (=5).

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Escherichia coli ST224 and IncF/bla plasmids drive resistance to extended-spectrum cephalosporins in poultry flocks in Parana, Brazil.

Int J Food Microbiol

November 2022

Unité Antibiorésistance et Virulence Bactériennes, Agence Nationale de Sécurité Sanitaire de l'alimentation, de l'environnement et du travail (ANSES) - Université de Lyon, Lyon, France. Electronic address:

Resistant Enterobacterales of avian intestinal origin can contaminate carcasses during broiler processing and thereby spread through the human food chain. This study aimed at assessing the prevalence, diversity and genomic characteristics of ESBL/AmpC Enterobacterales in poultry flocks from different farms and cities in the state of Paraná, Brazil. Enterobacterales isolated from cloacal samples were subjected to antimicrobial susceptibility testing (AST).

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Necrotoxigenic Escherichia coli 2 (NTEC2) are defined as E. coli producing the toxin known as cytotoxic necrotizing factor 2 (CNF2), a potent toxin primarily found in bovine but also in humans. NTEC2 are mostly associated with bovine, and cnf2 is known to be carried by pVir-like plasmids.

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