Ant-fungus species combinations engineer physiological activity of fungus gardens.

Fungus-gardening insects are among the most complex organisms because of their extensive co-evolutionary histories with obligate fungal symbionts and other microbes. Some fungus-gardening insect lineages share fungal symbionts with other members of their lineage and thus exhibit diffuse co-evolutionary relationships, while others exhibit little or no symbiont sharing, resulting in host-fungus fidelity. The mechanisms that maintain this symbiont fidelity are currently unknown.

The dynamics of community assembly under sudden mixing in experimental microcosms.

Landscape connectivity has been shown to alter community assembly and its consequences. Here we examine how strong, sudden changes in connectivity may affect community assembly by conducting experiments on the effects of "community mixing," situations where previously isolated communities become completely connected with consequent community reorganization. Previous theory indicates that assembly history dictates the outcome of mixing: mixing randomly assembled communities leads to a final community with random representation from the original communities, while mixing communities that were assembled via a long history of colonizations and extinctions leads to strong asymmetry, with one community dominating the other.

Fitting outbreak models to data from many small norovirus outbreaks.

Infectious disease often occurs in small, independent outbreaks in populations with varying characteristics. Each outbreak by itself may provide too little information for accurate estimation of epidemic model parameters. Here we show that using standard stochastic epidemic models for each outbreak and allowing parameters to vary between outbreaks according to a linear predictor leads to a generalized linear model that accurately estimates parameters from many small and diverse outbreaks.

Predation inhibits the positive effect of dispersal on intraspecific and interspecific synchrony in pond metacommunities.

Recent interest in the ecological drivers of compensatory and synchronous population dynamics has provided an improved yet incomplete understanding of local and regional population oscillations in response to variable environments. Here, we evaluate the effect of dispersal rate and spatiotemporal heterogeneity in predation by the selective planktivore, bluegill sunfish (Lepomis macrochirus), on local and regional dynamics of zooplankton in pond metacommunities. A metacommunity consisted of three pond mesocosm communities, one with constant presence of predators, one without predators, and one with alternating presence-absence of predators.

Phylogenetic analyses of Tolpis Adans. (Asteraceae) reveal patterns of adaptive radiation, multiple colonization and interspecific hybridization.

The plant genus Tolpis (Asteraceae) has been the subject of several investigations on the evolution of oceanic island plants. Its insular species were utilized in studies of artificial hybrid fertility, testing the validity of Baker's law, the application of DNA barcodes, and the phylogenetic utility of inter-simple sequence repeat markers. Despite this considerable interest in Tolpis, little is known about its phylogenetic history.

Spatial forecasting of switchgrass productivity under current and future climate change scenarios.

Evaluating the potential of alternative energy crops across large geographic regions, as well as over time, is a necessary component to determining if biofuel production is feasible and sustainable in the face of growing production demands and climatic change. Switchgrass (Panicum virgatum L.), a native perennial herbaceous grass, is a promising candidate for cellulosic feedstock production.

A population genetic transect of Panicum hallii (Poaceae).

Premise Of Study: Understanding the relationship between climate, adaptation, and population structure is of fundamental importance to botanists because these factors are crucial for the evolution of biodiversity and the response of species to future climate change. Panicum hallii is an emerging model system for perennial grass and bioenergy research, yet very little is known about the relationship between climate and population structure in this system. •

Methods: We analyzed geographic population differentiation across 39 populations of P.

Gamete fertility and ovule number variation in selfed reciprocal F1 hybrid triploid plants are heritable and display epigenetic parent-of-origin effects.

Polyploidy and hybridization play major roles in plant evolution and reproduction. To investigate the reproductive effects of polyploidy and hybridization in Arabidopsis thaliana, we analyzed fertility of reciprocal pairs of F1 hybrid triploids, generated by reciprocally crossing 89 diploid accessions to a tetraploid Ler-0 line. All F1 hybrid triploid genotypes exhibited dramatically reduced ovule fertility, while variation in ovule number per silique was observed across different F1 triploid genotypes.

In defense of 'niche modeling'.

There is a growing awareness of problems with the estimation of the ecological tolerances of species through correlative modeling approaches. These problems have led some investigators to argue for abandoning terms such as 'ecological niche model' and 'environmental niche model' in favor of the ostensibly more value-neutral 'species distribution model', as the models are thought to frequently be poor estimators of the niche. Here, I argue that most applications to which these models are put require the assumption that they do estimate the niche, however imperfectly, and that obscuring this inescapable and potentially flawed assumption in the terminology may only serve to hinder the development of the field.

Microsatellite markers for the native Texas perennial grass, Panicum hallii (Poaceae).

Premise Of The Study: We developed microsatellites for Panicum hallii for studies of gene flow, population structure, breeding experiments, and genetic mapping.

Methods And Results: Next-generation (454) genomic sequence data were used to design markers. Eighteen robust markers were discovered, 15 of which were polymorphic across six accessions of P.

Microbiomes of ant castes implicate new microbial roles in the fungus-growing ant Trachymyrmex septentrionalis.

Fungus-growing ants employ several defenses against diseases, including disease-suppressing microbial biofilms on their integument and in fungal gardens. Here, we compare the phenology of microbiomes in natural nests of the temperate fungus-growing ant Trachymyrmex septentrionalis using culture-dependent isolations and culture-independent 16S-amplicon 454-sequencing. 454-sequencing revealed diverse actinobacteria associated with ants, including most prominently Solirubrobacter (12.

Divergent hormonal responses to social competition in closely related species of haplochromine cichlid fish.

The diverse cichlid species flocks of the East African lakes provide a classical example of adaptive radiation. Territorial aggression is thought to influence the evolution of phenotypic diversity in this system. Most vertebrates mount hormonal (androgen, glucocorticoid) responses to a territorial challenge.

Social status predicts how sex steroid receptors regulate complex behavior across levels of biological organization.

Social status strongly affects behavior and physiology, in part mediated by gonadal hormones, although how each sex steroid acts across levels of biological organization is not well understood. We examine the role of sex steroids in modulating social behavior in dominant (DOM) and subordinate (SUB) males of a highly social fish, Astatotilapia burtoni. We first used agonists and antagonists to each sex steroid receptor and found that androgens and progestins modulate courtship behavior only in DOM, whereas estrogens modulate aggressive behavior independent of social status.

The brain as a source of selection on the social niche: examples from the psychophysics of mate choice in túngara frogs.

The main premise of this article is that various cognitive functions involved in signal analysis, memory, and decision making, all modulated by the animal's internal milieu, can generate selection for the forms of signals used in social interactions. Thus, just as an animal's view of its world, its Umwelt, determines how it interacts with its ecological niche, it can influence the evolution of its social niche. Thus, the brain is not only a landscape on which selection can act, but also it is a powerful source of selection on the animal's social niche.

Multi-colored homologs of the green fluorescent protein from hydromedusa Obelia sp.

The presence of green fluorescent protein (GFP) within the bioluminescent system of Obelia (Cnidaria, Hydrozoa, Campanulariidae) was inferred shortly after the discovery of GFP in Aequorea. Despite the enormous success of Aequorea GFP as a genetically encoded fluorescent label, Obelia GFP thus far has been defeating attempts to clone it from the hydroid life cycle stage. Here, we report cloning of three GFP-like fluorescent proteins (FPs) from Obelia medusa, representing cyan, green, and yellow spectral types.

Tactic-dependent plasticity in ejaculate traits in the swordtail Xiphophorus nigrensis.

In species with alternative reproductive tactics, males that sneak copulations often have larger, higher quality ejaculates relative to males that defend females or nest sites. Ejaculate traits can, however, exhibit substantial phenotypic plasticity depending on a male's mating role in sperm competition, which may depend on the tactic of his competitor. We tested whether exposure to males of different tactics affected sperm number and quality in the swordtail Xipophorus nigrensis, a species with small males that sneak copulations and large males that court females.

Aposematic signal variation predicts male-male interactions in a polymorphic poison frog.

Many species use conspicuous "aposematic" signals to communicate unpalatability/unprofitability to potential predators. Although aposematic traits are generally considered to be classic examples of evolution by natural selection, they can also function in the context of sexual selection, and therefore comprise exceptional systems for understanding how conspicuous signals evolve under multifarious selection. We used males from a highly territorial poison frog species in a dichotomous choice behavioral test to conduct the first examination of how aposematic signal variation influences male-male interactions.

Neural distribution of the nuclear progesterone receptor in the túngara frog, Physalaemus pustulosus.

The gonadal steroid hormone progesterone plays an important role across all vertebrates in mediating female reproductive physiology and behavior. Many effects of progesterone are mediated by a nuclear progesterone receptor (PR), which is crucial for integration of external signals and internal physiological cues in the brain to produce an appropriate behavioral output. The túngara frog, Physalaemus pustulosus, is an excellent model system for the study of mechanisms by which sensory signals, such as auditory communication, are processed within neural circuits where mate choice decisions are made.

Species dispersal rates alter diversity and ecosystem stability in pond metacommunities.

Metacommunity theory suggests that relationships between diversity and ecosystem stability can be determined by the rate of species dispersal among local communities. The predicted relationships, however, may depend upon the relative strength of local environmental processes and disturbance. Here we evaluate the role of dispersal frequency and local predation perturbations in affecting patterns of diversity and stability in pond plankton metacommunities.

Sexually dimorphic sensory gating drives behavioral differences in tungara frogs.

Males and females can differ both in the social behaviors they perform and in the contexts in which they engage in these behaviors. One possible mechanism of sex differences in behavior is a sexual dimorphism in the relay of sensory information to motor areas, but no studies have examined the role of such a relay in vertebrate sexually dimorphic behaviors. We used egr-1 expression as a marker of neural activation in frogs exposed to conspecific and heterospecific acoustic signals to compare activation patterns throughout the brains of males and females.

Metacommunity phylogenetics: separating the roles of environmental filters and historical biogeography.

Biogeographical, evolutionary and ecological processes interact to regulate patterns in metacommunities. However, as there are few quantitative methods for evaluating their joint effects, resolving this interaction is difficult. We develop a method that aims to evaluate the interaction between phylogenetic structure, historical biogeographic events and environmental filtering in driving species distributions in a large-scale metacommunity.

Prey dispersal rate affects prey species composition and trait diversity in response to multiple predators in metacommunities.

1. Recent studies indicate that large-scale spatial processes can alter local community structuring mechanisms to determine local and regional assemblages of predators and their prey. In metacommunities, this may occur when the functional diversity represented in the regional predator species pool interacts with the rate of prey dispersal among local communities to affect prey species diversity and trait composition at multiple scales.

When trees grow too long: investigating the causes of highly inaccurate bayesian branch-length estimates.

A surprising number of recent Bayesian phylogenetic analyses contain branch-length estimates that are several orders of magnitude longer than corresponding maximum-likelihood estimates. The levels of divergence implied by such branch lengths are unreasonable for studies using biological data and are known to be false for studies using simulated data. We conducted additional Bayesian analyses and studied approximate-posterior surfaces to investigate the causes underlying these large errors.