154 results match your criteria: "" Sukachev Institute of Forest[Affiliation]"

In the conifer tree rings, each tracheid goes through three phases of differentiation before becoming an element of the stem water-conducting structure: division, extension, and cell wall thickening. These phases are long-lasting and separated temporally, especially cell wall thickening. Despite the numerous lines of evidence that external conditions affect the rate of growth processes and the final anatomical dimensions during the respective phases of tracheid differentiation, the influence of the environment on anatomical dimensions during the cell division phase (cambial activity) has not yet been experimentally confirmed.

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During recent years, a new disease of Siberian fir (A. sibirica) emerged in Central Siberia, exhibiting symptoms of stem/branch deformation, cambium necrosis, and dieback of branches and twigs, the causal agent remaining unknown. The aim was to identify agent of the disease and to investigate its pathogenicity to A.

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One of the effects of climate change on boreal forest will be more frequent forest wildfires and permafrost thawing. These will increase the availability of soil organic matter (SOM) for microorganisms, change the ground vegetation composition and ultimately affect the emissions of biogenic volatile organic compounds (BVOCs), which impact atmospheric chemistry and climate. BVOC emissions from boreal forest floor have been little characterized in southern boreal region, and even less so in permafrost soil, which underlies most of the northern boreal region.

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Article Synopsis
  • - The study investigates how tree resilience to drought affects survival by analyzing a database of >3,500 trees from 118 sites, comparing those that survived droughts to those that died.
  • - Trees that died during droughts showed lower resilience to prior droughts, indicating that resilience is key for long-term survival.
  • - Angiosperms and gymnosperms exhibit differing strategies for dealing with drought: angiosperms struggle with initial drought impacts, while gymnosperms have difficulty recovering to pre-drought growth rates.
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The impact of permafrost on carbon dioxide and methane fluxes in Siberia: A meta-analysis.

Environ Res

March 2020

Sukachev Institute of Forest SB RAS, Federal Research Center, Krasnoyarsk Science Center SB RAS, 50/28 Akademgorodok St., 660036, Krasnoyarsk, Russian Federation.

There are serious concerns associated with greenhouse gases (GHG) fluxes in high latitude ecosystems and how the permafrost thawing may potentially affect the global climate, through the alteration of carbon (C) dioxide (CO) and methane (CH) emissions. We performed a meta-analysis of 3002 observations from 104 published studies on CO and CH fluxes in Siberia (Russian Federation). Siberia is a vast region characterized by a large C-rich permafrost region, which is already degrading due to escalating climate change, and also large wetland areas, also regarded as a source of CH.

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The soil-water interfaces (SWI) in soil pores are hotspots for organic matter (OM) transformation. However, due to the heterogeneous and opaque nature of soil microenvironment, direct and continuous tracing of interfacial reactions, such as OM transformations and formation of organo-mineral associations, are rare. To investigate these processes, a new soil microarray technology (SoilChips) was developed and used.

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Exploring species diversity and host plant associations of leaf-mining micromoths (Lepidoptera: Gracillariidae) in the Russian Far East using DNA barcoding.

Zootaxa

August 2019

Sukachev Institute of Forest, Siberian Branch of Russian Academy of Sciences, Federal Research Center Krasnoyarsk Science Center SB RAS, Krasnoyarsk, 660036, Russia Siberian Federal University, Krasnoyarsk, 660041, Russia INRA, UR0633 Zoologie Forestière, Orléans, F-45075, France..

The Russian Far East (RFE) is an important hotspot of biodiversity whose insect fauna remains understudied, particularly its Microlepidoptera. Here we explore the diversity of leaf-mining micromoths of the family Gracillariidae, their distribution and host plant associations in RFE using a combination of field observations and sampling, DNA barcoding, morphological analysis and literature review.                We collected 91 gracillariid specimens (45 larvae, 9 pupae and 37 adults) in 12 localities across RFE and identified 34 species using a combination of DNA barcoding and morphology.

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Article Synopsis
  • Scientists studied how the direction of slopes (like south or north) and temperature changes with height affect how Scots pine trees grow.
  • They found that the slope direction impacts three important things for trees: light, heat, and water.
  • Even though temperature and sunlight affected growth, the overall structure of the trees was mostly stable across different locations, and the difference in growth was mostly determined by the slope's direction and local climate conditions.
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The Forest Observation System, building a global reference dataset for remote sensing of forest biomass.

Sci Data

October 2019

Department Foresterie et Environnement (DFR FOREN), Institut National Polytechnique Félix Houphouët-Boigny, INP-HB, Yamoussoukro, BP 2661, Côte d'Ivoire.

Forest biomass is an essential indicator for monitoring the Earth's ecosystems and climate. It is a critical input to greenhouse gas accounting, estimation of carbon losses and forest degradation, assessment of renewable energy potential, and for developing climate change mitigation policies such as REDD+, among others. Wall-to-wall mapping of aboveground biomass (AGB) is now possible with satellite remote sensing (RS).

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The woolly mammoth mitochondrial genome (including the Malolyakhovsky mammoth) has been previously sequenced, followed by the annotation of all its genes (MF770243). In this study, based on the Malolyakhovsky mammoth, we describe for the first time the sites of functional significance in the control region of the woolly mammoth mitogenome.

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An amendment to this paper has been published and can be accessed via a link at the top of the paper.

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The increasing trend of large carnivore attacks on humans not only raises human safety concerns but may also undermine large carnivore conservation efforts. Although rare, attacks by brown bears Ursus arctos are also on the rise and, although several studies have addressed this issue at local scales, information is lacking on a worldwide scale. Here, we investigated brown bear attacks (n = 664) on humans between 2000 and 2015 across most of the range inhabited by the species: North America (n = 183), Europe (n = 291), and East (n = 190).

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It is generally accepted that animal heartbeat and lifespan are often inversely correlated, however, the relationship between productivity and longevity has not yet been described for trees growing under industrial and pre-industrial climates. Using 1768 annually resolved and absolutely dated ring width measurement series from living and dead conifers that grew in undisturbed, high-elevation sites in the Spanish Pyrenees and the Russian Altai over the past 2000 years, we test the hypothesis of grow fast-die young. We find maximum tree ages are significantly correlated with slow juvenile growth rates.

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Mobile genetic elements explain size variation in the mitochondrial genomes of four closely-related Armillaria species.

BMC Genomics

May 2019

Laboratory of Forest Genomics, Genome Research and Education Center, Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, 660036, Russia.

Article Synopsis
  • Armillaria species are known for causing white-rot root disease in plants and are significant in evolutionary studies, but their complete mitochondrial genomes (mitogenomes) weren't previously documented.
  • Researchers sequenced and analyzed the mitogenomes of four Armillaria species, revealing variations in size due to differing numbers of mobile genetic elements and introns.
  • The findings indicate that mitogenome structures are highly variable among these species, influenced by mobile genetic elements, and align with the established phylogenetic relationships between them.
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During a DNA barcoding campaign of leaf-mining Gracillariidae from the Asian part of Russia, a new species of Hübner, feeding on the Siberian pea shrub, Lam. (Fabaceae) was discovered in Siberia. Here, this taxon is described as Among Fabaceae-feeding , so far only (Ermolaev) has been known to develop on .

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Siberian larch (Larix sibirica Ledeb.) chloroplast genome and development of polymorphic chloroplast markers.

BMC Bioinformatics

February 2019

Laboratory of Forest Genomics, Genome Research and Education Center, Siberian Federal University, 660036, Krasnoyarsk, Russian Federation.

Background: The main objectives of this study were sequencing, assembling, and annotation of chloroplast genome of one of the main Siberian boreal forest tree conifer species Siberian larch (Larix sibirica Ledeb.) and detection of polymorphic genetic markers - microsatellite loci or simple sequence repeats (SSRs) and single nucleotide polymorphisms (SNPs).

Results: We used the data of the whole genome sequencing of three Siberian larch trees from different regions - the Urals, Krasnoyarsk, and Khakassia, respectively.

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Stepwise large genome assembly approach: a case of Siberian larch (Larix sibirica Ledeb).

BMC Bioinformatics

February 2019

Laboratory of Forest Genomics, Genome Research and Education Center, Siberian Federal University, 660036, Krasnoyarsk, Russia.

Background: De novo assembling of large genomes, such as in conifers (~ 12-30 Gbp), which also consist of ~ 80% of repetitive DNA, is a very complex and computationally intense endeavor. One of the main problems in assembling such genomes lays in computing limitations of nucleotide sequence assembly programs (DNA assemblers). As a rule, modern assemblers are usually designed to assemble genomes with a length not exceeding the length of the human genome (3.

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Tree mortality is a key driver of forest dynamics and its occurrence is projected to increase in the future due to climate change. Despite recent advances in our understanding of the physiological mechanisms leading to death, we still lack robust indicators of mortality risk that could be applied at the individual tree scale. Here, we build on a previous contribution exploring the differences in growth level between trees that died and survived a given mortality event to assess whether changes in temporal autocorrelation, variance, and synchrony in time-series of annual radial growth data can be used as early warning signals of mortality risk.

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During an ongoing DNA-barcoding campaign of the leaf-mining moths that feed on woody plants in Northeast Asia, four lineages of the genus (Gracillariidae, Phyllocnistinae) were discovered on dogwood ( spp): Ermolaev, 1987 on Hemsl. (Japan: Hokkaido) and three new species - one feeding on , L. and Wall.

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Article Synopsis
  • * The incorrect URL given was 'https://www.ams.ethz.ch/research.html', which has been corrected to 'http://www.ams.ethz.ch/research/published-data.html'.
  • * The correction has been updated in both the PDF and HTML formats of the article.
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Permafrost landslides promote soil CO emission and hinder C accumulation.

Sci Total Environ

March 2019

GFZ German Research Centre for Geosciences, Section Geomicrobiology, Telegrafenberg C-425, 14473 Potsdam, Germany; Institute of Earth and Environmental Sciences, University of Potsdam, 14476 Potsdam, Germany.

Landslides are common in high-latitude forest ecosystems that have developed on permafrost. The most vulnerable areas in the permafrost territories of Siberia occur on the south-facing slopes of northern rivers, where they are observed on about 20% of the total area of river slopes. Landslide disturbances will likely increase with climate change especially due to increasing summer-autumn precipitation.

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Application of Toxigenic Alternaria oxytropis to Soybeans and its Effect on Swainsonine Detection in Different Environments.

Bull Environ Contam Toxicol

February 2019

Engineering Research Centre of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun, 130118, Jilin Province, China.

Alternaria oxytropis is an endophytic fungus of locoweeds that synthesizes swainsonine toxin. In this work, we evaluated the effect of A. oxytropis on soybean seedlings and quantified swainsonine in different culture conditions.

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Tree ring-based reconstruction of the long-term influence of wildfires on permafrost active layer dynamics in Central Siberia.

Sci Total Environ

February 2019

Department of Geography, University of Cambridge, CB2 3EN, UK; Global Change Research Institute CAS, 603 00 Brno, Czech Republic; Swiss Federal Research Institute WSL, CH-8903 Birmensdorf, Switzerland; Department of Geography, Masaryk University, Kotlářská 2, 61137, Czech Republic.

Although it has been recognized that rising temperatures and shifts in the hydrological cycle affect the depth of the seasonally thawing upper permafrost stratum, it remains unclear to what extent the frequency and intensity of wildfires, and subsequent changes in vegetation cover, influence the soil active layer on different spatiotemporal scales. Here, we use ring width measurements of the subterranean stem part of 15 larch trees from a Sphagnum bog site in Central Siberia to reconstruct long-term changes in the thickness of the active layer since the last wildfire occurred in 1899. Our approach reveals a three-step feedback loop between above- and belowground ecosystem components.

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The correlation between the kinetic stability of molecules against temperature and variations in their geometric structure under optical excitation is investigated by the example of different organic pheromone molecules sensitive to temperature or ultraviolet radiation using the density functional theory. The kinetic stability is determined by the previously developed method based on the calculation of the probability of extension of any structural bond by a value exceeding the limit value L corresponding to the breaking of the bond under temperature excitation. The kinetic stability calculation only requires the eigenfrequencies and vibrational mode vectors in the molecule ground state to be calculated, without determining the transition states.

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