The phenomenon of L-amino acid homochirality was analyzed on the basis that protein synthesis evolved in an environment in which ribose nucleic acids preceded proteins, so that selection of L-amino acids may have arisen as a consequence of the properties of the RNA molecule. Aminoacylation of RNA is the primary mechanism for selection of amino acids for protein synthesis, and models of this reaction with both D- and L-amino acids have been constructed. It was confirmed, as observed by others, that the aminoacylation of RNA by amino acids in free solution is not predictably stereoselective. However, when the RNA molecule is constrained on a surface (mimicking prebiotic surface monolayers), it becomes automatically selective for the L-enantiomers. Conversely, L-ribose RNA would have been selective for the D-isomers. Only the 2' aminoacylation of surface-bound RNA would have been stereoselective. This finding may explain the origin of the redundant 2' aminoacylation still undergone by a majority of today's amino acids before conversion to the 3' species required for protein synthesis. It is concluded that L-amino acid homochirality was predetermined by the prior evolution of D-ribose RNA and probably was chirally directed by the orientation of early RNA molecules in surface monolayers.
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http://dx.doi.org/10.1096/fasebj.12.6.503 | DOI Listing |
ACS Appl Bio Mater
December 2024
Department of Chemistry, Indian Institute of Technology, Kharagpur, West Bengal 721302, India.
Blue-emissive nitrogen-doped chiral carbon dots (d-NCD230 and l-NCD230) exhibiting antipodal chiroptical activity, synthesized from the thermal pyrolysis of citric acid and d/l-aspartic acid in 1:2 molar ratios, have been explored as chirality-based fluorescent turn-off/on probes for the detection of Hg and l-cysteine (l-Cys). Circular dichroism (CD) spectroscopy revealed that the chiroptical activity originates from a synergy among intrinsic chirality, chiral precursors on the NCD surface, and hybridization of lower energy levels within the embedded chiral chromophore. Quantitative analysis of optical asymmetry using the Kuhn asymmetry factor () at the CD signal of 312 nm showed a higher value for d-NCD230 (1.
View Article and Find Full Text PDFPhys Chem Chem Phys
December 2024
Center for Computational Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8577, Japan.
Enantioenrichment of amino acids is essential during the early chemical evolution leading to the origin of life. However, the detailed molecular mechanisms remain unsolved. Dimerization of enantiomers is the first molecular process in the nucleation of deposition and crystallization, which are both essential for enantioenrichment.
View Article and Find Full Text PDFMass Spectrom (Tokyo)
November 2024
Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Osaka 558-8585, Japan.
Intermolecular interactions between aromatic amino acids were investigated by ultraviolet photodissociation spectroscopy of hydrogen-bonded protonated clusters of histidine (His) and tryptophan (Trp) enantiomers in the gas phase. Product ion spectra and photodissociation spectra in the wavelength range of the S-S transition of Trp at several temperatures (8-100 K) were obtained using a tandem mass spectrometer equipped with an electrospray ionization source and a cold ion trap. l-Trp detachment forming protonated His was the main pathway.
View Article and Find Full Text PDFBiomater Sci
December 2024
Department of Chemistry, COMSATS University, Abbottabad Campus, KPK, Pakistan 22060.
Chiral recognition holds tremendous significance in both life science and chemistry. The ability to differentiate between enantiomers is crucial because one enantiomer typically holds greater biological relevance while its counterpart is often not only unnecessary but also potentially harmful. In this regard, homochiral metallacycle [ZnClL] is used in this study to understand and differentiate between the and enantiomers of amino acids (alanine, proline, serine, and valine).
View Article and Find Full Text PDFAngew Chem Int Ed Engl
November 2024
College of Chemistry, Chemical Engineering and Materials Science, Jiangsu Key Laboratory of Advanced Functional Polymer Materials, & Suzhou key Laboratory of Macromolecular Design and Precision Synthesis, Soochow University, Suzhou, 215123, P.R. China.
Incorporating chiral molecules in the covalent organic frameworks (COFs) with uniformly ordered pores results in chiral COFs, which have been highly promising candidates for enantioseparation. Herein, a homochiral COF nanochannel membrane is reported by introducing chiral centers (L-phenylalanine methyl ester) into one of the organic ligands for the enantioseparation of chiral amino acids. The separation results show that the D-isomer is preferentially transported through the porous membrane channel.
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