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Identification and characterization of 17 novel polynucleotide microsatellite markers in Ocypode stimpsoni (Decapoda: Ocypodidae).
BMC Res Notes
December 2024
National Institute of Biological Resources, Inchen, 22689, Republic of Korea.
Objective: The ghost crab Ocypode stimpsoni (Decapoda) is designated as a protected marine species in Korea due to its declining population. In this study, we successfully identified 17 microsatellite markers for O. stimpsoni through next-generation sequencing.
View Article and Find Full Text PDFChromosome-Level Genome Assembly and Genetic Maker System of the Endangered Largemouth Bronze Gudgeon (Coreius guichenoti) with Focus on Conservation Applications.
Integr Zool
December 2024
Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China.
The largemouth bronze gudgeon (Coreius guichenoti), an endemic fish species, is distributed in the upper Yangtze River drainage. Due to anthropogenetic factors such as water pollution, overfishing, and dam construction, the wild populations of C. guichenoti have dramatically declined in recent decades.
View Article and Find Full Text PDFGenomic characterization of Achromobacter genogroup 20 and identification of a potential species-specific marker.
J Glob Antimicrob Resist
November 2024
Universidad de Buenos Aires, Facultad de Farmacia y Bioquímica, Instituto de Investigaciones en Bacteriología y Virología Molecular (IBaViM), Laboratorio de Resistencia Bacteriana, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.
Article Synopsis
- The study aimed to analyze the genome of Achromobacter genogroup 20 and identify resistance determinants related to antibiotic resistance.
- Isolate 413638 was classified as Achromobacter genogroup 20 ST365, demonstrating significant resistance to multiple antibiotics and possessing several resistance-related genetic elements, including a newly identified OXA-type β-lactamase.
- The findings suggest that the resistance markers identified could explain the antibiotic resistance profile of Achromobacter genogroup 20 ST365, with the new OXA variant potentially serving as a useful marker for further species identification.
Elevated Microsatellite Alterations at Selected Tetranucleotide Repeats (EMAST) in Penile Squamous Cell Carcinoma-No Evidence for a Role in Carcinogenesis.
Curr Oncol
September 2024
Institute of Pathology, University Hospital Erlangen-Nürnberg, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), 91054 Erlangen, Germany.
Penile squamous cell carcinoma (pSCC) is a rare malignancy with a global incidence ranging from 0.1 to 0.7 per 100,000 males.
View Article and Find Full Text PDFIllumina-based transcriptomic analysis of the fast-growing leguminous tree : functional gene annotation and identification of novel SSR-markers.
Front Plant Sci
August 2024
Institute of Global Human Resource Development, Okayama University, Okayama, Japan.
is a fast-growing leguminous tree that is widely cultivated in tropical areas such as Indonesia, Malaysia, Australia, and southern China. This tree has versatile utility in timber, furniture, and pulp production. Illumina sequencing of was conducted, and the raw data of 124,410,892 reads were filtered and assembled into 93,317 unigenes, with a total of 84,411,793 bases.
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