Heme chain exchange was employed to investigate the dimer dissociation reaction of human apohemoglobin in 0.1 M potassium phosphate buffer, pH 7.0, at 20 degrees C. Incubation of apohemoglobin (alpha 0 beta 0) with either alpha h (or beta h) allowed the monitoring of the formation of a semihemoglobin alpha h beta 0 (or alpha 0 beta h) species with time. Analysis revealed that the rate of formation of both semihemoglobins was essentially identical and coincided with the disappearance of heme chain. Time courses were exponential and followed first order kinetics yielding a dimer dissociation rate constant of 0.54 (+/- 0.07) h-1. A study over the pH range from 6.5 to 8.0 revealed that this dissociation rate exhibited a maximum at pH 7.0 (implicating a histidyl residue). The effect of temperature (6-37 degrees C) on this dimer dissociation rate yielded a linear Arrhenius Plot and an energy of activation of 7.2 kcal/mol. These results are consistent with alpha G-beta G helical pairing being a major contributor to apohemoglobin dimer integrity.
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http://dx.doi.org/10.1006/bbrc.1994.1369 | DOI Listing |
J Hazard Mater
January 2025
School of Materials, Sun Yat-Sen University, Shenzhen 518107, China; State Key Laboratory of Optoelectronic Materials and Technologies, Sun Yat-Sen University, Guangzhou 510275, China. Electronic address:
Perfluoroalkyl substances (PFAS) are environmentally persistent, bioaccumulative and toxic pollutants. However, thorough degradation of PFAS remains exceptionally difficult due to the high dissociation energy of the C-F bond. Here, we report a viable strategy to markedly degrade PFAS completely by capitalizing on a harmless polytetrafluoroetylene (PTFE) as a piezocatalyst.
View Article and Find Full Text PDFNat Chem Biol
January 2025
Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.
Iron-sulfur clusters are essential metallocofactors synthesized by multiprotein machineries via an unclear multistep process. Here we report a step-by-step dissection of the [2Fe-2S] cluster assembly process by the Escherichia coli iron-sulfur cluster (ISC) assembly machinery using an in vitro reconstituted system and a combination of biochemical and spectroscopic techniques. We show that this process is initiated by iron binding to the scaffold protein IscU, which triggers persulfide insertion by the cysteine desulfurase IscS upon the formation of a complex with IscU.
View Article and Find Full Text PDFJ Biol Chem
January 2025
T.C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, Maryland, 21218, USA. Electronic address:
Truncated hemoglobins (TrHbs) have an ancient origin and are widely distributed in microorganisms where they often serve roles other than dioxygen transport and storage. In extremophiles, these small heme proteins must have features that secure function under challenging conditions: at minimum, they must be folded, retain the heme group, allow substrates to access the heme cavity, and maintain their quaternary structure if present and essential. The genome of the obligate psychropiezophile Shewanella benthica strain KT99 harbors a gene for a TrHb belonging to a little-studied clade of globins (subgroup 2 of group N).
View Article and Find Full Text PDFGenes (Basel)
January 2025
Department of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Background: Eukaryotic RNA polymerase I consists of 12 or 11 core subunits and three dissociable subunits, Rrn3, A34, and A49. The A34 and A49 subunits exist as a heterodimer. In silico analysis of the A34 family of transcription factors demonstrates a commonly shared domain structure despite a lack of sequence conservation, as well as N-terminal and C-terminal disordered regions.
View Article and Find Full Text PDFBiomolecules
January 2025
Institute of Chemical Kinetics and Combustion SB RAS, 3 Institutskaya Street, Novosibirsk 630090, Russia.
In the present work, we performed calculations of the kinetic isotope effect (KIE) on H/D, N/N, O/O, and C/C isotopic substitution in the dissociation of beta-sheet polyglycine dimers of different lengths into two monomer chains. This dissociation reaction, proceeding via breaking of the interchain hydrogen bonds (H-bonds), is considered to be a model of unfolding of the secondary structure of proteins. The calculated strengthening of the interchain hydrogen bonds N-H⋯O=C due to heavy isotope substitution decreases in the row H/D >> N/N > O/O > C/C.
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