In a foregoing paper, we demonstrated that under equilibrated diet conditions, guinea pig liver L-threonine deaminase activity should be allocated to two distinct enzymes: a specific L-threonine deaminase without activity toward L-serine and a L-serine deaminase having a secondary activity toward L-threonine. In the present work, we observed that a high protidic diet caused an elevation of total threonine deaminase activity. Thus purification of guinea pig liver L-threonine deaminase was attempted, using ultracentrifugation, salt precipitation, heat treatment, ion exchange chromatography on DEAE Sephacel, Sephadex G 200 molecular sieve, 2 amino-2 methyl-1 propanol linked CH 4B Sepharose chromatography. The weak variations of the ratios of specific activities respectively toward L-threonine and L-serine observed at each stage of the purification procedure indicated that both activities are very likely supported by a single enzyme preexisting in the liver of guinea pigs fed an equilibrated diet. No isoenzyme was evidenced by polyacrylamide gel electrophoresis or DEAE Sephacel chromatography. Moreover, our purification procedure demonstrated that not only inducible L-threonine deaminase guinea pig liver activity was due to L-serine deaminase, but also that an initially existing specific L-threonine deaminase activity paradoxically disappeared with a protein rich diet.
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Biochem Biophys Res Commun
December 2024
College of Food Science and Technology, Nanjing Agricultural University, Nanjing, 210095, China; Key Laboratory of Food Contact Materials Safety, State Administration for Market Regulation, China. Electronic address:
Bacterial infections are becoming a significant threat to global human health due to the growing prevalence of biofilm-related infections and the rise in antibiotic resistance. D/l-cysteine functionalized chiral gold nanoparticles (D/P-Au NPs or L/P-Au NPs) have demonstrated a potent antibacterial effect against E. coli, while the mechanism remains to be elucidated through additional research.
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April 2024
Department of Microbiology, University of Georgia, Athens, Georgia, USA.
In the absence of the RidA deaminase results in the accumulation of the reactive enamine 2-aminoacrylate (2AA). The resulting 2AA stress impacts metabolism and prevents growth in some conditions by inactivating a specific target pyridoxal 5'-phosphate (PLP)-dependent enzyme(s). The detrimental effects of 2AA stress can be overcome by changing the sensitivity of a critical target enzyme or modifying flux in one or more nodes in the metabolic network.
View Article and Find Full Text PDFBiochem Biophys Res Commun
April 2024
State Key Laboratory of Medicinal Chemical Biology, Tianjin Key Laboratory of Protein Science, and College of Life Sciences, Nankai University, Tianjin, 300071, China. Electronic address:
IlvA1, a pyridoxal phosphate-dependent (PLP) enzyme, catalyzes the deamination of l-threonine and l-serine to yield 2-ketobutyric acid or pyruvate. To gain insights into the function of IlvA1, we determined its crystal structure from Pseudomonas aeruginosa to 2.3 Å.
View Article and Find Full Text PDFToxicol Appl Pharmacol
January 2024
State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, University of Chinese Academy of Sciences, The Chinese Academy of Sciences, Beijing 100085, PR China; College of Environment and Resources, University of Chinese Academy of Sciences, Beijing 101408, PR China; Linus Pauling Institute, Oregon State University, Corvallis, OR 97331, USA. Electronic address:
CBL0137, a promising small molecular anti-cancer drug candidate, has been found to effectively induce apoptosis via activating p53 and suppressing nuclear factor-kappa B (NF-κB). However, it is still not clear whether CBL0137 can induce necroptosis in liver cancer; and if so, what is the underlying molecular mechanism. Here we found that CBL0137 could significantly induce left-handed double helix structure Z-DNA formation in HepG2 cells as shown by Z-DNA specific antibody assay, which was further confirmed by observing the expression of Z-DNA binding protein 1 (ZBP1) and adenosine deaminase acting on RNA 1 (ADAR1).
View Article and Find Full Text PDFSTAR Protoc
December 2023
Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan; Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Tokyo 113-8657, Japan; RIKEN Center for Sustainable Resource Science, Saitama 351-0198, Japan. Electronic address:
Threonine deaminase catalyzes the first step of isoleucine biosynthesis from threonine. In this protocol, we describe the process of measuring the enzymatic activity of threonine deaminase in the fission yeast cell lysate, which is catalyzed by Tda1. First, we describe the process of preparing cell lysates from fission yeast cell cultures.
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