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Complete Genome Sequence of Pedobacter sp. PAMC26386 and Their Low Temperature Application in Arabinose-containing Polysaccharides Degradation.
Curr Microbiol
March 2021
Department of Life Science and Biochemical Engineering, Graduate School, Sunmoon University, 70 Sunmoonro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Korea.
Pedobacter are a representative genus of soil-associated bacteria. Here we have provided the complete genome sequence of Pedobacter sp. PAMC26386 isolated from Antarctic soil, and functionally annotated the genome, describing the unique features of carbohydrate active enzymes (CAZymes) and α-L-arabinofuranosidase (α-L-ABF).
View Article and Find Full Text PDFThe PhoPQ Two-Component System Is the Major Regulator of Cell Surface Properties, Stress Responses and Plant-Derived Substrate Utilisation During Development of -Host Plant Pathosystems.
Front Microbiol
January 2021
Department of Molecular Biology, Belarusian State University, Minsk, Belarus.
(formerly ) is a recently defined species of soft rot enterobacteria capable of infecting many plant hosts and damaging different tissues. Complex transcriptional regulation of virulence properties can be expected for such a versatile pathogen. However, the relevant information is available only for related species and is rather limited.
View Article and Find Full Text PDFGlucose and arabinose dependent mineral phosphate solubilization and its succinate-mediated catabolite repression in Rhizobium sp. RM and RS.
J Biosci Bioeng
November 2019
Institute of Science, Nirma University, Sarkhej-Gandhinagar Highway, Ahmedabad, Gujarat 382481, India. Electronic address:
Rhizobium sp. RM and RS are Vigna radiata root nodule isolates with the ability to solubilize tricalcium phosphate and rock phosphate under 50 mM Tris-Cl buffering conditions. Rhizobium sp.
View Article and Find Full Text PDFIdentification and characterization of three Penicillium chrysogenum α-l-arabinofuranosidases (PcABF43B, PcABF51C, and AFQ1) with different specificities toward arabino-oligosaccharides.
Enzyme Microb Technol
June 2015
Division of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Osaka 599-8531, Japan. Electronic address:
Article Synopsis
- The study identified and cloned two new genes encoding α-l-arabinofuranosidases (ABFs) from Penicillium chrysogenum 31B, adding to the previously known four enzymes.
- Both enzymes, PcABF43B and PcABF51C, displayed distinct optimal activity conditions, with PcABF43B functioning best at low temperatures (20°C) and PcABF51C at higher temperatures (45°C).
- The substrate specificity analysis revealed that PcABF43B preferentially hydrolyzed branched arabino-oligosaccharides, while PcABF51C and another enzyme (AFQ1) showed more efficiency on linear forms, indicating their different roles in degrading dietary fibers.
Isolation and characterization of unhydrolyzed oligosaccharides from switchgrass (Panicum virgatum, L.) xylan after exhaustive enzymatic treatment with commercial enzyme preparations.
Carbohydr Res
April 2015
USDA, Agricultural Research Service, National Center for Agricultural Utilization Research, Bioenergy Research Unit, 1815 N. University Street, Peoria, IL 61604, USA(†).
Switchgrass (Panicum virgatum, L.) is a potential renewable source of carbohydrates for use in microbial conversion to biofuels. Xylan comprises approximately 30% of the switchgrass cell wall.
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