Here, we demonstrate through AFM imaging and CD spectroscopy that the binding of silver ions (Ag) to poly(dGdC), a double-stranded (ds) DNA composed of two identical repeating strands, at a stoichiometry of one Ag per GC base pair induces a one-base shift of one strand relative to the other. This results in a ds nucleic acid-Ag conjugate consisting of alternating CC and GG base pairs coordinated by silver ions. The proposed organization of the conjugate is supported by the results of our Quantum Mechanical (QM) and Molecular Mechanics (MMs) calculations. The reduction of Ag ions followed by the partial oxidation of silver atoms yields a highly fluorescent conjugate emitting at 720 nm. This fluorescent behavior in conjugates of long, repetitive ds DNA (thousands of base pairs) with silver has never been demonstrated before. We propose that the poly(dGdC)-Ag conjugate functions as a dynamic system, comprising various small clusters embedded within the DNA and interacting with one another through energy transfer. This hypothesis is supported by the results of our QM and MMs calculations. Additionally, these DNA-silver conjugates, comprising silver nanoclusters, may possess conductive properties, making them potential candidates for use as nanowires in nanodevices and nanosensors.
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http://dx.doi.org/10.3390/nano15050397 | DOI Listing |
Nanomaterials (Basel)
March 2025
The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.
Here, we demonstrate through AFM imaging and CD spectroscopy that the binding of silver ions (Ag) to poly(dGdC), a double-stranded (ds) DNA composed of two identical repeating strands, at a stoichiometry of one Ag per GC base pair induces a one-base shift of one strand relative to the other. This results in a ds nucleic acid-Ag conjugate consisting of alternating CC and GG base pairs coordinated by silver ions. The proposed organization of the conjugate is supported by the results of our Quantum Mechanical (QM) and Molecular Mechanics (MMs) calculations.
View Article and Find Full Text PDFACS Appl Mater Interfaces
March 2025
School of Chemical Science and Engineering, Department of Clinical Laboratory, Shanghai Tenth People's Hospital, Tongji University, 1239 Siping Rd, Shanghai, 200092, P. R. China.
In the domain of digital data exchange, ensuring information security is the supreme demand for data storage and transmission. Interlinking cryptographic techniques with steganographic principles can enhance data confidentiality. However, there have been no reports thus far to develop molecular platforms for hybrid crypto-steganography systems.
View Article and Find Full Text PDFACS Omega
March 2025
Nanoscience Center and Department of Chemistry, University of Copenhagen, Universitetsparken 5, Copenhagen 2100, Denmark.
DNA-stabilized silver nanoclusters (DNA-AgNCs) are a class of fluorophores with interesting photophysical properties. They are capable of generating anti-Stokes fluorescence upon excitation with near-infrared lasers. The anti-Stokes fluorescence has previously been speculated to be either the result of consecutive photon absorption (upconversion) or hot band absorption (HBA).
View Article and Find Full Text PDFACS Appl Mater Interfaces
March 2025
National Engineering Research Center for Colloidal Materials, School of Chemistry and Chemical Engineering, Shandong University, Jinan 250100, P. R. China.
Emerging as a promising functional material, metal nanoclusters that emit near-infrared (NIR) radiation have garnered significant attention due to their distinctive properties. Nonetheless, the rational design of NIR-emissive metal nanoclusters still faces substantial challenges. Herein, we demonstrate a self-assembly strategy for constructing NIR-emissive nanocomposites (abbreviated as ) using water-soluble Ag-NCs (Ag(mba), where Hmba = 2-mercaptobenzoic acid) and branched polyethylenimine (PEI) ( = 750,000).
View Article and Find Full Text PDFChem Sci
February 2025
School of Chemistry, Indian Institute of Science Education and Research Thiruvananthapuram Kerala 69551 India
Metal nanoclusters (NCs) exhibit potential as catalysts for electrochemical studies, providing atomic-level insights into mechanisms. However, it remains elusive to construct an integrated catalyst with a molecular-level understanding of its mechanism, especially in silver cluster assemblies. In this study, we have shown that atomically precise Ag cluster assemblies Ag-py, Ag-pyz, Ag-bpy, Ag-bpa, Ag-azopy, (where Ag = secondary building unit, Py = pyridine, pyz = pyrazine, bpy = 4,4'-bipyridine, bpa = 1,2-bis(4-pyridyl)ethane, and azopy = 4,4'-azopyridine) serve as paradigms for demonstrating the hydrogen evolution reaction (HER), where the catalytic activity is fine-tuned using two functional units: the cluster core and the linkers.
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