Unlabelled: The diversity patterns and drivers of soil microbial communities across spatial distances have been extensively investigated over the recent years. However, whether microbial communities in surface and subsurface soils showed an identical spatial distribution pattern at a small regional scale has not been fully confirmed. For this, we investigated the linkage between soil water content (SWC), pH as well as nutrient contents and soil bacterial diversity and communities in different soil layers in the Longmenshan fault zone in Sichuan Province, China. Our investigation indicated that surface soil bacterial communities were positively correlated with SWC and pH ( < 0.05), whereas those in the subsurface correlated with soil organic carbon and its fractions ( < 0.05). Bacterial community co-occurrence network structures differed significantly across soil layers. Compared to subsurface soils, surface soils had more nodes, larger network diameters, and longer average paths. The keystone species belonged to Rokubacteriales in the surface, and in the subsurface soil, they belonged to Chryseobacterium, while no keystone species were found in the subsoil. Spatial distance showed a smaller effect (4%-7%) on community structure, indicating that various soil factors represent key regulatory factors for bacterial community shifts. Collectively, soil depth showed a considerably higher effect than spatial distance on soil bacterial community composition and network properties in Longmenshan fault zone, with key species differing across soil layers. These results could provide an essential basis for further investigation of microbial functions in soil ecosystem heterogeneity and maintaining soil health.
Importance: Soil water content served as the main driver of changes in surface soil bacterial diversity and community. Spatial structure had a greater influence on surface soil bacterial communities and diversity. Soil depth had a significantly higher effect on soil bacterial community composition and network properties than site. Our results may provide insights into the impact of microbial functions on biodiversity and ecosystem service functions.
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http://dx.doi.org/10.1128/aem.01161-24 | DOI Listing |
Proc Natl Acad Sci U S A
March 2025
Commissariat à l'énergie atomique et aux énergies alternatives, CNRS, Institute for Integrative Biology of the Cell, Université Paris-Saclay, Gif-sur-Yvette 91198, France.
is a soil bacterium that establishes a nitrogen-fixing symbiosis within root nodules of legumes. In this symbiosis, undergoes a drastic cellular change leading to a terminally differentiated form, called bacteroid, characterized by genome endoreduplication, increased cell size, and high membrane permeability. Bacterial cell cycle (mis)regulation is at the heart of this differentiation process.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
March 2025
Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Laboratorio de Biotecnología Microbiana. Prol. Carpio y Plan de Ayala s/n, Col. Santo Tomás, Ciudad de México, Alcaldía Miguel Hidalgo. C.P. 11340, Mexico.
Several and strains from the north of Mexico were isolated during the description of strains. , and were later described as novel species. Next, the Genomic Encyclopedia of Bacteria and Archaea project retrieved the genome sequences of several strains from the above species.
View Article and Find Full Text PDFCurr Microbiol
March 2025
College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China.
Tobacco bacterial wilt (TBW), caused by Ralstonia solanacearum, significantly impacts tobacco yield and quality, leading to substantial economic losses. This study investigated the effects of the microbial agents JX (Pichia sp. J1 and Klebsiella oxytoca ZS4) on the soil properties, rhizospheric microbial community, tobacco agronomic traits, and TBW incidence through field experiments.
View Article and Find Full Text PDFCurr Microbiol
March 2025
Key Laboratory of Plant Biotechnology of Liaoning Province, School of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Naphthenic acids (NAs) are indigenous and complex components in petroleum. In the context of increasing global energy demand, the increasing extraction of fossil resources leads to increased environmental release of NAs, resulting in various environmental risks. However, the impact of NAs exposure on soil microorganisms remains still unclear.
View Article and Find Full Text PDFAppl Environ Microbiol
March 2025
School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China.
Unlabelled: The diversity patterns and drivers of soil microbial communities across spatial distances have been extensively investigated over the recent years. However, whether microbial communities in surface and subsurface soils showed an identical spatial distribution pattern at a small regional scale has not been fully confirmed. For this, we investigated the linkage between soil water content (SWC), pH as well as nutrient contents and soil bacterial diversity and communities in different soil layers in the Longmenshan fault zone in Sichuan Province, China.
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