Peroxiredoxins (Prx) are ubiquitous Cys peroxidases regulated by sulfinylation, a modification that occurs when the sulfenic acid generated on the catalytic Cys by peroxide reduction reacts with a second molecule of peroxide. In the Prx1 family, sulfinylation sensitivity is controlled by competition between a structural transition from a fully folded (FF) to locally unfolded (LU) conformation and the chemical step of sulfinylation. The initial peroxide reduction relies on a conserved catalytic hydroxylated residue that allows peroxide optimal activation. This study aimed at investigating the role of this catalytic residue in sulfinylation. Sulfenate attack on peroxide was favored by one order of magnitude when a catalytic Thr was present, for yeast cytosolic Prx1-type enzymes, human Prx1 and yeast mitochondrial Prx, a Prx6-type enzyme. Furthermore, pKa determination supported the notion of electrostatic interaction between the catalytic hydroxyl and sulfenate intermediate. Finally, FF-LU transition kinetics was faster with a catalytic Thr, supporting that the hydroxyl group proximity to the nascent sulfenate group also promotes the FF-LU transition. We identify a major mechanism that activates sulfinylation in hyperoxidation-sensitive Prxs from the Prx1 and Prx6 families. Furthermore, we show that the catalytic hydroxylated residue holds a dual role in regulating hyperoxidation sensitivity, by activating the sulfinylation reaction, while also promoting the competing FF to LU transition, thus acting as an important regulatory determinant. The present work sets the basis for investigating other instances of Cys proteins regulated by sulfinylation, a modification increasingly recognized in cell redox regulation and signaling. 00, 000-000.
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http://dx.doi.org/10.1089/ars.2024.0685 | DOI Listing |
Antioxid Redox Signal
March 2025
Université de Lorraine, CNRS, IMoPA, F-54000 Nancy, France.
Peroxiredoxins (Prx) are ubiquitous Cys peroxidases regulated by sulfinylation, a modification that occurs when the sulfenic acid generated on the catalytic Cys by peroxide reduction reacts with a second molecule of peroxide. In the Prx1 family, sulfinylation sensitivity is controlled by competition between a structural transition from a fully folded (FF) to locally unfolded (LU) conformation and the chemical step of sulfinylation. The initial peroxide reduction relies on a conserved catalytic hydroxylated residue that allows peroxide optimal activation.
View Article and Find Full Text PDFInt J Biol Macromol
March 2025
Beijing Key Laboratory of Ionic Liquids Clean Process, CAS Key Laboratory of Green Process and Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing 100190, China; School of Chemical and Engineering, University of Chinese Academy of Sciences, Beijing 100049, China.
Ionic liquids (ILs) are highly effective in lignocellulose pretreatment due to their excellent solvation properties. However, the single-phase nature of conventional IL pretreatment not only causes component mixing, complicating separation and utilization, but also limits large-scale application due to the high cost. To address these challenges, this study developed a biphasic pretreatment system combining the protic IL [BHEM]mesy with aqueous pentanol, aiming to efficiently fractionate corn stover under mild conditions.
View Article and Find Full Text PDFJ Biomol Struct Dyn
March 2025
College of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, PR China.
Screening and developing tyrosinase inhibitors with novel structures are notable to receive attention in the field of skin pigmentation research due to their application in hyperpigmentation control. Hydroxyacetophenone is a natural antioxidant found in the (Norwegian spruce) needles and is widely used in the cosmetic industry as an antioxidant ingredient. In this study, integrations of virtual molecular dynamics (MD) simulations and biochemical inhibition kinetics were conducted to validate the inhibitory function of hydroxyacetophenone on tyrosinase.
View Article and Find Full Text PDFJ Biol Chem
March 2025
Department of Biology, Faculty of Science, Niigata University, 8050, Ikarashi 2-no-cho, Nishi-ku, Niigata 950-2181, Japan. Electronic address:
Peptidyl-tRNA hydrolase (Pth) hydrolyzes the ester bond between the peptide and the tRNA of peptidyl-tRNA molecules, which are the products of aborted translation, to prevent cell death by recycling tRNA. Numerous studies have attempted to elucidate the substrate recognition mechanism of Pth. However, the binding mode of the peptidyl-A76 (3'-terminal adenosine of tRNA) moiety of the substrate to Pth, especially the A76 moiety, still remains unclear.
View Article and Find Full Text PDFRSC Chem Biol
February 2025
Chemistry Research Laboratory, Department of Chemistry and the Ineos Oxford Institute for Antimicrobial Research, University of Oxford 12 Mansfield Road Oxford OX1 3TA UK
Jumonji-C domain-containing protein 6 (JMJD6) is a human 2-oxoglutarate (2OG)/Fe(ii)-dependent oxygenase catalysing post-translational C5 hydroxylation of multiple lysine residues, including in the bromodomain-containing proteins BRD2, BRD3 and BRD4. The role(s) of JMJD6-catalysed substrate hydroxylation are unclear. JMJD6 is important in development and JMJD6 catalysis may promote cancer.
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