Stabilization of optically inactive α-helices of peptidic foldamers through sequence control and , + 4 stapling.

Org Biomol Chem

Research Center for Negative Emissions Technologies, Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan.

Published: March 2025

We report the effect of a minimal (, + 4) staple on the dynamic interconversion between right-handed () and left-handed () forms of an optically inactive α-helical peptide composed only of helicogenic achiral amino acids, such as 1-amino-cyclohexanecarboxylic acid (Acc) and 4-aminopiperidine-4-carboxylic acid (Api) residues. The / interconversion rate of the peptide with a flexible hydrocarbon-based staple was estimated to be 0.41 s at 298 K through variable temperature H NMR measurements in 1,1,2,2-tetrachloroethane-. A combined analysis using H NMR spectroscopy, single-crystal X-ray crystallography, and density functional theory (DFT) calculations revealed that the present flexible stapling does not effectively constrain the conformational freedom of the helical peptide. DFT calculations revealed that Acc residues exhibit a stronger propensity for α-helical conformation over the 3-helix than α-aminoisobutyric acid (Aib) residues, with their influence being highly dependent on position and sequence within the oligopeptides.

Download full-text PDF

Source
http://dx.doi.org/10.1039/d5ob00244cDOI Listing

Publication Analysis

Top Keywords

optically inactive
8
dft calculations
8
calculations revealed
8
stabilization optically
4
inactive α-helices
4
α-helices peptidic
4
peptidic foldamers
4
foldamers sequence
4
sequence control
4
control stapling
4

Similar Publications

Stabilization of optically inactive α-helices of peptidic foldamers through sequence control and , + 4 stapling.

Org Biomol Chem

March 2025

Research Center for Negative Emissions Technologies, Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan.

We report the effect of a minimal (, + 4) staple on the dynamic interconversion between right-handed () and left-handed () forms of an optically inactive α-helical peptide composed only of helicogenic achiral amino acids, such as 1-amino-cyclohexanecarboxylic acid (Acc) and 4-aminopiperidine-4-carboxylic acid (Api) residues. The / interconversion rate of the peptide with a flexible hydrocarbon-based staple was estimated to be 0.41 s at 298 K through variable temperature H NMR measurements in 1,1,2,2-tetrachloroethane-.

View Article and Find Full Text PDF

RNA-binding proteins (RBPs) perform diverse functions including the regulation of chromatin dynamics and the coupling of transcription with RNA processing. However, our understanding of their actions in mammalian neurons remains limited. Using affinity purification, yeast-two-hybrid and proximity ligation assays, we identified interactions of multiple RBPs with neural retina leucine (NRL) zipper, a Maf-family transcription factor critical for retinal rod photoreceptor development and function.

View Article and Find Full Text PDF

Purpose: Frequency doubling of neodymium-doped yttrium aluminum garnet (Nd-YAG) laser results in emission of photocoagulating 532 nm light compared with photolytic 1064 nm emission. The ergonomic benefits of solid-state lasers led to replacement of older coagulating lasers in ophthalmic centres by frequency-doubled Nd-YAG laser. Our study aims to evaluate safety and efficacy of frequency-doubled Nd-YAG laser for photocoagulation of corneal neovascularisation (NLPC).

View Article and Find Full Text PDF

Purpose: Polypoidal choroidal vasculopathy (PCV) may have frequent recurrences after fluid resolution, but time to recurrence is unclear. This study explored time to first polypoidal recurrence after 1-year fixed-dosing aflibercept treatments.

Design: Retrospective cohort study.

View Article and Find Full Text PDF

Triplet excited states in organic molecules are generally optically inactive due to spin-forbidden transitions to the singlet ground state. Recent studies have extensively investigated triplet states to circumvent limitations imposed by spin statistics in organic light-emitting diodes. Room-temperature electrophosphorescence and electrofluorescence have previously been observed in thienyl-substituted phenazines without heavy metals; however, phosphorescence was absent when spin density was localized on the thiophene units, despite the expected heavy-atom effect from the sulfur atom.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!