Accurate and reliable annotation of anatomical landmarks in laparoscopic surgery remains a challenge due to varying degrees of landmark visibility and changing shapes of human tissues during a surgical procedure in videos. In this paper, we propose a knowledge-driven framework that integrates prior surgical expertise with visual data to address this problem. Inspired by visual reasoning knowledge of tool-anatomy interactions, our framework models a spatio-temporal graph to represent the static topology of tool and tissue and dynamic transitions of landmarks' temporal behavior. By assigning explainable features of the surgical scene as node attributes in the graph, the surgical context is incorporated into the knowledge space. An attention-guided message passing mechanism across the graph dynamically adjusts the focus in different scenarios, enabling robust tracking of landmark states throughout the surgical process. Evaluations on the clinical dataset demonstrate the framework's ability to effectively use the inductive bias of explainable features to label landmarks, showing its potential in tackling intricate surgical tasks with improved stability and reliability.
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http://dx.doi.org/10.1109/TMI.2025.3529294 | DOI Listing |
Brief Bioinform
March 2025
School of Artificial Intelligence, Jilin University, 3003 Qianjin Street, Changchun 130012, Jilin Province, China.
Identifying genes causally linked to cancer from a multi-omics perspective is essential for understanding the mechanisms of cancer and improving therapeutic strategies. Traditional statistical and machine-learning methods that rely on generalized correlation approaches to identify cancer genes often produce redundant, biased predictions with limited interpretability, largely due to overlooking confounding factors, selection biases, and the nonlinear activation function in neural networks. In this study, we introduce a novel framework for identifying cancer genes across multiple omics domains, named ICGI (Integrative Causal Gene Identification), which leverages a large language model (LLM) prompted with causality contextual cues and prompts, in conjunction with data-driven causal feature selection.
View Article and Find Full Text PDFAnnu Int Conf IEEE Eng Med Biol Soc
July 2024
Accurate and robust affect recognition in the wild is challenging using smartwatches due to scarcity of labeled sensor data. Although smartwatches can easily collect additional information such as, personal and contextual attributes related to affective events, the existing models fail to extract useful representations from such information and thus suffer from performance degradation under various settings. To tackle this problem, we present a novel multimodal machine learning framework that utilizes representation from the personal and contextual attributes as well as from limited sensor data.
View Article and Find Full Text PDFIEEE Trans Med Imaging
January 2025
Accurate and reliable annotation of anatomical landmarks in laparoscopic surgery remains a challenge due to varying degrees of landmark visibility and changing shapes of human tissues during a surgical procedure in videos. In this paper, we propose a knowledge-driven framework that integrates prior surgical expertise with visual data to address this problem. Inspired by visual reasoning knowledge of tool-anatomy interactions, our framework models a spatio-temporal graph to represent the static topology of tool and tissue and dynamic transitions of landmarks' temporal behavior.
View Article and Find Full Text PDFA primary challenge in robotic tool use is achieving precise manipulation with dexterous robotic hands to mimic human actions. It requires understanding human tool use and allocating specific functions to each robotic finger for fine control. Existing work has primarily focused on the overall grasping capabilities of robotic hands, often neglecting the functional allocation among individual fingers during object interaction.
View Article and Find Full Text PDFSci Rep
February 2025
School of Water and Environment, Chang'an University, Xi'an, 710054, Shaanxi, China.
Shallow geothermal energy (SGE) is a green, clean, and renewable energy source that is widely used for heating and cooling. However, hydrogeology conditions, thermophysical properties, geological environment conditions, and other factors influence the implementation of SGE projects. Making a suitability evaluation before implementing the SGE projects is necessary.
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