Apigenin () and 3I,8II-biapigenin (), a dimer of apigenin, were isolated from the aerial parts of (Spach) Boiss. (Hypericaceae family). This study aimed to evaluate the inhibitory effects of flavonoids and against pteridine reductase-1 (PTR1), an essential enzyme for the growth of parasites and other trypanosomatid protozoa. The second objective was to understand the binding interactions and structural properties of PTR1 inhibition at the atomic level through extensive analyses and Saturation-Transfer Difference (STD)-NMR studies. Anti-PTR1 results showed that the dimeric form () was active (IC of 34.65 μM), while the monomeric form () was inactive. Computational analyses yielded a grid score of -52.14 kcal/mol and a free energy binding score of -38.23 kcal/mol. A stable ligand-receptor complex at the PTR1 binding site was observed for . Moreover, several important binding residues in the catalytic triad (Y194 and K198) and the substrate loop (L226, S227, S229, V230, and M233) interacted with . The STD-NMR results corroborated the computational simulations, indicating that H-6I and H-6II of the conjugated ring system on the biapigenin structure showed the highest interaction with the PTR1 active site. MTT assay results for against human normal fibroblast cells (BJ cells) exhibited no cytotoxicity at concentrations of 50 and 100 μM. Overall, 3I,8II-biapigenin () displayed promise as a candidate for studies and anti-leishmanial drug development. Further evaluation of the anti-leishmanial and anti-PTR1 activities of bioflavonoid , along with its analogues, is warranted.
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http://dx.doi.org/10.1080/07391102.2024.2435621 | DOI Listing |
J Biomol Struct Dyn
March 2025
H.E.J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, Karachi, Pakistan.
Apigenin () and 3I,8II-biapigenin (), a dimer of apigenin, were isolated from the aerial parts of (Spach) Boiss. (Hypericaceae family). This study aimed to evaluate the inhibitory effects of flavonoids and against pteridine reductase-1 (PTR1), an essential enzyme for the growth of parasites and other trypanosomatid protozoa.
View Article and Find Full Text PDFBioorg Chem
March 2025
Instituto Nacional de Ciência e Tecnologia de Fármacos e Medicamentos (INCT-INOFAR; http://www.inct-inofar.ccs.ufrj.br/), Laboratório de Avaliação e Síntese de Substâncias Bioativas (LASSBio®), http://www.lassbio.icb.ufrj.br), CCS, Universidade Federal do Rio de Janeiro, Cidade Universitária, P.O. Box 68024, 21941-971 Rio de Janeiro, RJ, Brazil; Programa de Pós-Graduação em Química-Universidade Federal do Rio de Janeiro (UFRJ), Brazil. Electronic address:
The first uncompetitive nucleoside hydrolase from Leishmania donovani (NHLd) described in literature (LASSBio-1985) was discovered. Nucleoside hydrolase (NH) has been described as a promising target for the discovery of new leishmanicidal candidates. NH is part of purine pathway in several parasites, including trypanosomatids of the genus Leishmania.
View Article and Find Full Text PDFPharmaceuticals (Basel)
January 2025
Laboratory of Organic Chemistry, Department of Chemistry, National and Kapodistrian University of Athens, Panepistimioupolis Zografou, 11571 Athens, Greece.
Background: In this study, two chalcone analogs were synthesized through in silico and experimental methods, and their potential to inhibit the lipoxygenase enzyme, which plays a role in the inflammation pathway, was assessed. Specifically, this study is a continuation of previous research in which chalcone derivatives were synthesized and characterized.
Objectives/methods: In the current work, we present the re-synthesis of two chalcones, with a focus on their docking studies, NMR analysis, and dynamic simulations.
bioRxiv
December 2024
Istanbul Medipol University, School of Engineering and Natural Sciences, Department of Biomedical Engineering, 34810, Istanbul, Turkey.
G protein-coupled receptor (GPCR) signaling is terminated by arrestin binding to a phosphorylated receptor. Binding propensity has been shown to be modulated by stabilizing the pre-activated state of arrestin through point mutations or C-tail truncation. Here, we hypothesize that pre-activated rotated states can be stabilized by small molecules, and this can promote binding to phosphorylation-deficient receptors, which underly a variety of human disorders.
View Article and Find Full Text PDFProg Nucl Magn Reson Spectrosc
December 2024
Department of Chemistry, Lancaster University, Lancaster LA1 4YB, United Kingdom. Electronic address:
Amyloid fibrils are insoluble, fibrous nanostructures that accumulate extracellularly in biological tissue during the progression of several human disorders, including Alzheimer's disease (AD) and type 2 diabetes. Fibrils are assembled from protein monomers via the transient formation of soluble, cytotoxic oligomers, and have a common molecular architecture consisting of a spinal core of hydrogen-bonded protein β-strands. For the past 25 years, NMR spectroscopy has been at the forefront of research into the structure and assembly mechanisms of amyloid aggregates.
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