Fluid-structure interaction (FSI) can be key in the generation of accurate digital replica of cardiovascular systems. To personalize these models, however, several patient-specific parameters need to be measured, which can be challenging to accomplish in a non-invasive manner. Alternatively, the cardiac kinematics of the patient can be extracted from imaging data and then directly imposed as a dynamic boundary condition in the computational model, also incorporating temporal and spatial measurement errors. A more advanced method combines FSI with kinematic driven simulations using data-assimilation. Despite its potential, the application of this technique to complex multi-physics cardiovascular simulations remains limited. In this study, we develop an FSI model of a patient's left ventricle (LV) and aorta, personalized with dynamic imaging data using a Nudging algorithm-a data assimilation technique-which is tailored to each cardiac chamber. In particular, for the LV, which embeds small-scale and irregular endocardial structures (higher measurement errors), the active contraction of the patient is replicated primarily using integral measurements (ventricular volume and surface area). On the other hand, the passive motion of the aorta is guided in the simulation relying directly on the local tissue positions from CT scan. The algorithm's simplicity and zero additional computational cost make it particularly suitable for multi-physics problems. Our results show that the assimilation procedure must be tuned to guide the system toward the measurements within the uncertainty range of the in-vivo data.
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http://dx.doi.org/10.1016/j.compbiomed.2025.109876 | DOI Listing |
Fluid-structure interaction (FSI) can be key in the generation of accurate digital replica of cardiovascular systems. To personalize these models, however, several patient-specific parameters need to be measured, which can be challenging to accomplish in a non-invasive manner. Alternatively, the cardiac kinematics of the patient can be extracted from imaging data and then directly imposed as a dynamic boundary condition in the computational model, also incorporating temporal and spatial measurement errors.
View Article and Find Full Text PDFNPJ Digit Med
February 2025
Department of Information Medicine, National Center of Neurology and Psychiatry, Tokyo, Japan.
At the forefront of bridging computational brain modeling with personalized medicine, this study introduces a novel, real-time, electrocorticogram (ECoG) simulator, based on the digital twin brain concept. Utilizing advanced data assimilation techniques, specifically a Variational Bayesian Recurrent Neural Network model with hierarchical latent units, the simulator dynamically predicts ECoG signals reflecting real-time brain latent states. By assimilating broad ECoG signals from macaque monkeys across awake and anesthetized conditions, the model successfully updated its latent states in real-time, enhancing precision of ECoG signal simulations.
View Article and Find Full Text PDFEpidemics
January 2025
Department of Environmental Health Sciences, Mailman School of Public Health, Columbia University, 722 W 168th St, New York, NY 10032, United States; Columbia Climate School, Columbia University, Level A Hogan, 2910 Broadway, New York, NY 10025, United States.
Background: Understanding the dynamics of infectious disease spread and predicting clinical outcomes are critical for managing large-scale epidemics and pandemics, such as COVID-19. Effective modeling of disease transmission in interconnected populations helps inform public health responses and interventions across regions.
Methods: We developed a novel metapopulation model for simulating respiratory virus transmission in the North America region, specifically for the 96 states, provinces, and territories of Canada, Mexico, and the United States.
Nano Lett
February 2025
Center for Nanophase Materials Sciences, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, United States.
Rapid validation of newly predicted materials through autonomous synthesis requires real-time adaptive control methods that exploit physics knowledge, a capability that is lacking in most systems. Here, we demonstrate an approach to enable real-time control of thin film synthesis by combining optical diagnostics with a Bayesian state estimation method. We developed a physical model for film growth and applied the direct filter (DF) method for real-time estimation of nucleation and growth rates during pulsed laser deposition (PLD).
View Article and Find Full Text PDFProg Mater Sci
April 2025
Institute of Biomechanics, Graz University of Technology, Austria.
Aortic dissection continues to be responsible for significant morbidity and mortality, although recent advances in medical data assimilation and in experimental and models have improved our understanding of the initiation and progression of the accumulation of blood within the aortic wall. Hence, there remains a pressing necessity for innovative and enhanced models to more accurately characterize the associated pathological changes. Early on, experimental models were employed to uncover mechanisms in aortic dissection, such as hemodynamic changes and alterations in wall microstructure, and to assess the efficacy of medical implants.
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