Urine, as a non-invasive sampling specimen, offers significant advantages for the diagnosis and treatment of diseases. However, as a water-based matrix, most metabolites in urine are high polarity, which limits the ultrafast extraction and high enrichment of these polar metabolites from urine. Though solvent-based extraction method has demonstrated considerable benefits in extraction rates, the necessity for selecting water-immiscible solvents restricts the extraction of highly polar metabolites. Consequently, there is a pressing need for a rapid extraction method that achieves a high enrichment factor specifically targeting highly polar metabolites in urine. (90) RESULTS: This study is the first attempt to use water-soluble solvent to extract highly polar metabolites from urine. Firstly, a needle device capable of switching between sampling and extracting modes was constructed by utilizing carbon nanofibers/carbon fibers (CNFs/CFs) filled with the needle tip. Under the effect of nanoconfinement, the needle can achieve in-situ ultrafast extraction employing a methanol/water mixture as the nanoconfined extraction solvent. Additionally, the nanodistribution of the extracted solvent within the nanoconfined space enhances the exaction rate and efficiency. By coupling this method with HILIC-LC/MS detection protocol, 33 highly polar metabolites from human urine were simultaneously quantified within 3 min. Following systematic validation, the established method was successfully applied to urine target metabolomics analysis for hepatocellular carcinoma, the potential diagnosis biomarkers were screened out using multiple data processing methods. (130) SIGNIFICANCE: In conclusion, the home-made nanoconfinement effect based in-situ sampling and extracting (NISE) switching needle device demonstrates strong advantages in the highly enrichment and ultrafast analysis of highly polar metabolites in an aqueous matrix, providing a promising tool for clinical disease diagnosis and screening. (44).
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http://dx.doi.org/10.1016/j.aca.2025.343738 | DOI Listing |
Br J Pharmacol
March 2025
College of Traditional Chinese Medicine, Chongqing Medical University, Chongqing, China.
Background And Purpose: We previously showed that the iridoid glycoside extract of Lamiophlomis rotata (IGLR) induces M2 macrophage polarisation to accelerate wound healing. The potentially active compounds (quality markers) in IGLR that accelerate wound healing have not been elucidated; we here identified quality markers that accelerate wound healing.
Experimental Approach: After IGLR gavage of dorsal excisional wound mice and normal mice for 7 days, the tissues were analysed using the matrix-assisted laser desorption/ionisation (MALDI) mass spectrometry imaging (MSI) method and were further validated by liquid chromatography/mass spectrometry (LC/MS) coupled with multivariate analyses to identify quality markers.
Anal Bioanal Chem
March 2025
Department of Agrobiotechnology IFA-Tulln, Institute of Bioanalytics and Agro-Metabolomics, BOKU University, Vienna, Tulln, 3430, Austria.
High-resolution mass spectrometers, particularly when paired with liquid chromatography, are the instrument of choice for untargeted metabolomics approaches. Instruments, such as the Orbitrap, offer high sensitivity, selectivity, and exceptional mass accuracy, though they pose certain technical challenges, complicating absolute and comparative quantification. Consequently, method validation is crucial to ensure reliable results, as untargeted metabolomics approaches require the detection and quantification of a large number of metabolites in a broad dynamic range.
View Article and Find Full Text PDFJ Steroid Biochem Mol Biol
March 2025
Department of Chemistry and Chemical Biology, McMaster University, Hamilton, Ontario, L8S 4M1, Canada. Electronic address:
Vitamin D deficiency (VDD) is prevalent globally and in pediatric intensive care units, where it represents a modifiable risk factor that may impact patient recovery during hospitalization. Herein, we performed a retrospective analysis of serum samples from a phase-II randomized placebo-controlled trial involving a single large bolus of 10,000 IU/kg vitamin D3 ingested by critically ill children with VDD (25-OH-D < 50 nmol/L). Targeted and untargeted methods were used to comprehensively measure 6 vitamin D metabolites, 239 lipids, 68 polar metabolites, and 4 electrolytes using a multi-step data workflow for compound authentication.
View Article and Find Full Text PDFHeliyon
February 2025
Centre de recherches sur la Cognition Animale (CRCA), CNRS UMR 5169, 31062, Toulouse, France.
Experimental designs are essential mathematical tools in fields like agronomy, chemistry, and analytical chemistry for optimizing processes and minimizing variations. Doehlert designs, in particular, are valued for their efficiency in exploring experimental space with minimal experiments, providing detailed insights into complex processes. In analytical chemistry, these designs are extensively used for tasks such as extraction, purification, and method optimization, allowing systematic variation of factors to enhance accuracy and efficiency.
View Article and Find Full Text PDFTalanta
February 2025
Department of Chemistry, Faculty of Science, University of Hradec Králové, Rokitanského 62, 50003, Hradec Králové, Czech Republic. Electronic address:
Herein, we aim to establish a straightforward and versatile reversed-phase liquid chromatography/mass spectrometry (RP-LC/MS) methodology for analyzing a wide range of polar and mid-polar metabolites utilizing a single instrument, column, and mobile phase. We present a comprehensive evaluation of three C18 columns compatible with aqueous solutions using 19 mobile phases in terms of the number of detected metabolites, chromatographic performance, and MS response. The RP-LC/MS platform utilizes the HSS T3 column with a mobile phase consisting of 0.
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