Naturally evolved T-cell receptors (TCRs) exhibit remarkably high specificity in discriminating non-self antigens from self-antigens under dynamic biomechanical modulation. In contrast, engineered high-affinity TCRs often lose this specificity, leading to cross-reactivity with self-antigens and off-target toxicity. The underlying mechanism for this difference remains unclear. Our study reveals that natural TCRs exploit mechanical force to form optimal catch bonds with their cognate antigens. This process relies on a mechanically flexible TCR-pMHC binding interface, which enables force-enhanced CD8 coreceptor binding to MHC-αα domains through sequential conformational changes induced by force in both the MHC and CD8. Conversely, engineered high-affinity TCRs create rigid, tightly bound interfaces with cognate pMHCs of their parental TCRs. This rigidity prevents the force-induced conformational changes necessary for optimal catch-bond formation. Paradoxically, these high-affinity TCRs can form moderate catch bonds with non-stimulatory pMHCs of their parental TCRs, leading to off-target cross-reactivity and reduced specificity. We have also developed comprehensive force-dependent TCR-pMHC kinetics-function maps capable of distinguishing functional and non-functional TCR-pMHC pairs and identifying toxic, cross-reactive TCRs. These findings elucidate the mechano-chemical basis of the specificity of natural TCRs and highlight the critical role of CD8 in targeting cognate antigens. This work provides valuable insights for engineering TCRs with enhanced specificity and potency against non-self antigens, particularly for applications in cancer immunotherapy and infectious disease treatment, while minimizing the risk of self-antigen cross-reactivity.
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http://dx.doi.org/10.1038/s41422-025-01077-9 | DOI Listing |
J Environ Manage
March 2025
School of Chemistry and Chemical Engineering, Guangxi University, 100 East University Road, Nanning, 530004, PR China. Electronic address:
The current state of the world's water resources is facing serious challenges, and the current water purification processes are designed for a single, more specific contaminant, with more stringent constraints, which are not suitable for emergency water treatment in stochastic environment and may cause secondary pollution. It is necessary to provide a water purification method that is convenient, easy-to-operate, one-step treatment of multiple pollutants. Herein, silk fibroin (SF) that extracted from discarded silkworm cocoons and recycled silk and phytic acid (PA) are "woven" into a network structure through hydrogen bonding and electrostatic interaction to form a unique gel, which could be used to remove different pollutants by "sweeping and catching" and physical adsorption.
View Article and Find Full Text PDFCell Res
February 2025
Department of Cardiology of the Second Affiliated Hospital and Department of Cell Biology, Zhejiang University School of Medicine, Liangzhu Laboratory, Zhejiang University, Hangzhou, Zhejiang, China.
Naturally evolved T-cell receptors (TCRs) exhibit remarkably high specificity in discriminating non-self antigens from self-antigens under dynamic biomechanical modulation. In contrast, engineered high-affinity TCRs often lose this specificity, leading to cross-reactivity with self-antigens and off-target toxicity. The underlying mechanism for this difference remains unclear.
View Article and Find Full Text PDFJ Phys Chem B
March 2025
Institut für Chemie, Physikalische und Theoretische Chemie, Universität Rostock, Albert-Einstein-Straße 27, D-18059 Rostock, Germany.
We use molecular dynamics simulations to investigate the influence of the hydrogen bond (HB) catching agent dimethyl sulfoxide (DMSO) on the HB network in the hydroxy-functionalized ionic liquid (IL) 1-(4-hydroxybutyl)pyridinium bis(trifluoromethanesulfonyl)imide [HOCPy][NTf]. Three characteristic HBs are observed: between cations and anions (c-a), between two cations (c-c), and between cations and DMSO molecules (c-m). We quantify the thermodynamic stability of all HB species using a van 't Hoff analysis, observing that the IL HB network is significantly disrupted by the addition of DMSO.
View Article and Find Full Text PDFFront Psychol
February 2025
Institute of Experimental Neurology (INSPE), Division of Neuroscience (DNS), IRCCS San Raffaele Scientific Institute, Milan, Italy.
Rodents, in particular rats and mice, are currently the most widely employed animal models in psychology and behavioral neuroscience. Nevertheless, an interesting historical question is: when was the first rodent behavioral study performed and by whom? The current article presents the first rodent behavioral study in the history of science: a case of interspecies social bonding between a rat and a dog, observed in 1822 by the British chemist Samuel Moss (1794-1868) and subsequently described by the same in a scientific article in 1836. In the present article, after a biographical sketch of Samuel Moss, I examine in detail the notable case of interspecies bonding observed by Moss.
View Article and Find Full Text PDFBiophys J
February 2025
Departments of Microbiology and Immunology, Thomas Jefferson University, Philadelphia, Pennsylvania; Departments of Medical Oncology, Thomas Jefferson University, Philadelphia, Pennsylvania; Departments of Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, Pennsylvania. Electronic address:
A high-resolution crystal structure of stimulatory peptide-major histocompatibility complex (pMHC) ligands bound to T cell receptor (TCR) revealed different conformations of the two peptides at positions P6 and V7 compared to the conformation of the same peptides presented by unliganded MHC. Supercomputer simulations and a well-tempered metadynamics approach revealed several metastable noncanonical TCR-pMHC interactions that depend on the conformation of the MHC-bound peptides. The diversity of metastable states was significantly more represented in the signaling TCR-pMHC complex.
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